RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 FAM218AQ96MZ4 157 aa8.99□□□□□ -0.97
SFSWAP-208ENST00000539506 DAZ2Q13117 558 aaKnown RBP8.98□□□□□ -0.97
SFSWAP-208ENST00000539506 DAZ4Q86SG3 579 aaKnown RBP8.98□□□□□ -0.97
SFSWAP-208ENST00000539506 PRIMA1Q86XR5 153 aa8.98□□□□□ -0.97
SFSWAP-208ENST00000539506 DAZ3Q9NR90 486 aaKnown RBP8.98□□□□□ -0.97
SFSWAP-208ENST00000539506 ITPR2Q14571 2701 aa8.98□□□□□ -0.97
SFSWAP-208ENST00000539506 TINCRA0A1B0GVN0 87 aa8.98□□□□□ -0.97
SFSWAP-208ENST00000539506 SPANXDQ9BXN6 97 aa8.98□□□□□ -0.97
SFSWAP-208ENST00000539506 SPANXCQ9NY87 97 aa8.98□□□□□ -0.97
SFSWAP-208ENST00000539506 INSP01308 110 aa8.98□□□□□ -0.97
SFSWAP-208ENST00000539506 C5orf47Q569G3 176 aa8.98□□□□□ -0.97
SFSWAP-208ENST00000539506 WIPF1O43516 503 aa8.97□□□□□ -0.97
SFSWAP-208ENST00000539506 PLA2G2AP14555 144 aa8.97□□□□□ -0.97
SFSWAP-208ENST00000539506 GAGE2AQ6NT46 116 aa8.97□□□□□ -0.97
SFSWAP-208ENST00000539506 C11orf68Q9H3H3 251 aaKnown RBP8.97□□□□□ -0.97
SFSWAP-208ENST00000539506 TRGV1A0A0A0MS02 117 aa8.96□□□□□ -0.97
SFSWAP-208ENST00000539506 H3BT86 120 aa8.96□□□□□ -0.97
SFSWAP-208ENST00000539506 BAALC-AS2P0C853 105 aa8.96□□□□□ -0.97
SFSWAP-208ENST00000539506 CIRBPQ14011 172 aaKnown RBP8.96□□□□□ -0.98
SFSWAP-208ENST00000539506 LINC00242Q5T6M2 205 aa8.96□□□□□ -0.98
SFSWAP-208ENST00000539506 IL17DQ8TAD2 202 aa8.96□□□□□ -0.98
SFSWAP-208ENST00000539506 ATP5G1P05496 136 aa8.95□□□□□ -0.98
SFSWAP-208ENST00000539506 C9orf129Q5T035 196 aaKnown RBP8.95□□□□□ -0.98
SFSWAP-208ENST00000539506 CCL24O00175 119 aa8.95□□□□□ -0.98
SFSWAP-208ENST00000539506 MRPL23Q16540 153 aaKnown RBP8.95□□□□□ -0.98
SFSWAP-208ENST00000539506 TMEM86BQ8N661 226 aa8.94□□□□□ -0.98
SFSWAP-208ENST00000539506 PPDPFQ9H3Y8 114 aa8.94□□□□□ -0.98
SFSWAP-208ENST00000539506 LOC107984640A0A0U1RRK4 108 aa8.94□□□□□ -0.98
SFSWAP-208ENST00000539506 GIG44P09565 113 aaPredicted RBP8.94□□□□□ -0.98
SFSWAP-208ENST00000539506 STHQ8IWL8 128 aa8.94□□□□□ -0.98
SFSWAP-208ENST00000539506 WFDC10AQ9H1F0 79 aa8.94□□□□□ -0.98
SFSWAP-208ENST00000539506 SPANXA1Q9NS26 97 aa8.94□□□□□ -0.98
SFSWAP-208ENST00000539506 KRTAP1-1Q07627 177 aa8.94□□□□□ -0.98
SFSWAP-208ENST00000539506 Q6ZTI0 123 aa8.94□□□□□ -0.98
SFSWAP-208ENST00000539506 GCN1Q92616 2671 aaKnown RBP8.93□□□□□ -0.98
SFSWAP-208ENST00000539506 F8WDY8 70 aa8.93□□□□□ -0.98
SFSWAP-208ENST00000539506 LOC100131303A0A0U1RQF7 123 aa8.93□□□□□ -0.98
SFSWAP-208ENST00000539506 SLPIP03973 132 aa8.92□□□□□ -0.98
SFSWAP-208ENST00000539506 NTM-AS1Q6ZSK4 140 aa8.92□□□□□ -0.98
SFSWAP-208ENST00000539506 DNAJC30Q96LL9 226 aa8.92□□□□□ -0.98
SFSWAP-208ENST00000539506 IGKV3D-7A0A0C4DH55 119 aa8.92□□□□□ -0.98
SFSWAP-208ENST00000539506 NDUFA1O15239 70 aa8.92□□□□□ -0.98
SFSWAP-208ENST00000539506 TIRAPP58753 221 aa8.92□□□□□ -0.98
SFSWAP-208ENST00000539506 Q6Q795 121 aa8.92□□□□□ -0.98
SFSWAP-208ENST00000539506 SDIM1Q6ZPB5 146 aa8.91□□□□□ -0.98
SFSWAP-208ENST00000539506 SMIM1B2RUZ4 78 aa8.91□□□□□ -0.98
SFSWAP-208ENST00000539506 COX7A2LO14548 114 aa8.91□□□□□ -0.98
SFSWAP-208ENST00000539506 PFN2P35080 140 aa8.91□□□□□ -0.98
SFSWAP-208ENST00000539506 C9orf153Q5TBE3 101 aa8.91□□□□□ -0.98
SFSWAP-208ENST00000539506 LINC01006Q8NI28 216 aa8.91□□□□□ -0.98
SFSWAP-208ENST00000539506 C14orf132Q9NPU4 83 aa8.9□□□□□ -0.98
SFSWAP-208ENST00000539506 PLAC8L1A1L4L8 177 aa8.89□□□□□ -0.99
SFSWAP-208ENST00000539506 A0A087WVE0 104 aa8.89□□□□□ -0.99
SFSWAP-208ENST00000539506 MIR7-3HGQ8N6C7 128 aa8.89□□□□□ -0.99
SFSWAP-208ENST00000539506 NOP10Q9NPE3 64 aaKnown RBP8.89□□□□□ -0.99
SFSWAP-208ENST00000539506 IGLV5-45A0A087WSX0 123 aa8.89□□□□□ -0.99
SFSWAP-208ENST00000539506 A0A087WYN8 130 aa8.89□□□□□ -0.99
SFSWAP-208ENST00000539506 C22orf24Q9Y442 160 aa8.89□□□□□ -0.99
SFSWAP-208ENST00000539506 LINC00158P58513 81 aa8.88□□□□□ -0.99
SFSWAP-208ENST00000539506 OR13C6PQ8NH95 151 aa8.88□□□□□ -0.99
SFSWAP-208ENST00000539506 C19orf73Q9NVV2 129 aa8.88□□□□□ -0.99
SFSWAP-208ENST00000539506 VWFP04275 2813 aa8.88□□□□□ -0.99
SFSWAP-208ENST00000539506 LINC00337Q8N6G1 96 aa8.87□□□□□ -0.99
SFSWAP-208ENST00000539506 K7EQD1 137 aa8.87□□□□□ -0.99
SFSWAP-208ENST00000539506 HERVK_113P63121 156 aa8.87□□□□□ -0.99
SFSWAP-208ENST00000539506 C5orf38Q86SI9 138 aa8.87□□□□□ -0.99
SFSWAP-208ENST00000539506 RNASE1P07998 156 aaKnown RBP8.86□□□□□ -0.99
SFSWAP-208ENST00000539506 CYSTM1Q9H1C7 97 aa8.86□□□□□ -0.99
SFSWAP-208ENST00000539506 HELZ2Q9BYK8 2649 aaKnown RBP8.86□□□□□ -0.99
SFSWAP-208ENST00000539506 RPL35AP18077 110 aaKnown RBP8.86□□□□□ -0.99
SFSWAP-208ENST00000539506 TRBV7-7A0A0K0K1E9 115 aa8.85□□□□□ -0.99
SFSWAP-208ENST00000539506 NCR3O14931 201 aa8.85□□□□□ -0.99
SFSWAP-208ENST00000539506 CLPSL2Q6UWE3 100 aa8.85□□□□□ -0.99
SFSWAP-208ENST00000539506 CSDC2Q9Y534 153 aaKnown RBP8.85□□□□□ -0.99
SFSWAP-208ENST00000539506 DEFB121Q5J5C9 76 aa8.85□□□□□ -0.99
SFSWAP-208ENST00000539506 UNC79Q9P2D8 2635 aa8.85□□□□□ -0.99
SFSWAP-208ENST00000539506 IGLV5-39A0A0G2JS06 123 aa8.85□□□□□ -0.99
SFSWAP-208ENST00000539506 UBE2L6O14933 153 aa8.85□□□□□ -0.99
SFSWAP-208ENST00000539506 PRR3P79522 188 aaKnown RBP8.85□□□□□ -0.99
SFSWAP-208ENST00000539506 CSNK1G2-AS1Q8NCQ2 148 aa8.85□□□□□ -0.99
SFSWAP-208ENST00000539506 WFDC9Q8NEX5 89 aa8.85□□□□□ -0.99
SFSWAP-208ENST00000539506 RPL36AP83881 106 aaKnown RBP8.84□□□□□ -0.99
SFSWAP-208ENST00000539506 RPL36ALQ969Q0 106 aaKnown RBP8.84□□□□□ -0.99
SFSWAP-208ENST00000539506 SND1-IT1Q9HBX3 110 aa8.84□□□□□ -0.99
SFSWAP-208ENST00000539506 FAM240AA0A1B0GVK7 77 aa8.84□□□□□ -0.99
SFSWAP-208ENST00000539506 hADV29S1A0JD25 119 aa8.84□□□□□ -0.99
SFSWAP-208ENST00000539506 IGLV1-51P01701 117 aa8.84□□□□□ -0.99
SFSWAP-208ENST00000539506 CRPP02741 224 aa8.83□□□□□ -1
SFSWAP-208ENST00000539506 MALP21145 153 aa8.83□□□□□ -1
SFSWAP-208ENST00000539506 SMIM11BQ8TCY0 68 aa8.83□□□□□ -1
SFSWAP-208ENST00000539506 C16orf95Q9H693 158 aa8.83□□□□□ -1
SFSWAP-208ENST00000539506 CDC42SE2Q9NRR3 84 aa8.83□□□□□ -1
SFSWAP-208ENST00000539506 IGKV2-28A0A075B6P5 120 aa8.83□□□□□ -1
SFSWAP-208ENST00000539506 TRBV10-1A0A0K0K1A3 114 aa8.83□□□□□ -1
SFSWAP-208ENST00000539506 LECT2O14960 151 aa8.83□□□□□ -1
SFSWAP-208ENST00000539506 TIMM17BO60830 172 aa8.83□□□□□ -1
SFSWAP-208ENST00000539506 IGKV2D-28P01615 120 aa8.83□□□□□ -1
SFSWAP-208ENST00000539506 TRGV2A0A075B6R0 118 aa8.83□□□□□ -1
SFSWAP-208ENST00000539506 A0A096LPF7 62 aa8.83□□□□□ -1
SFSWAP-208ENST00000539506 PAX4O43316 350 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms