RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 FAM104AQ969W3 186 aa9.03□□□□□ -0.96
CCND1-204ENST00000539241 CHCHD1Q96BP2 118 aaKnown RBP9.03□□□□□ -0.96
CCND1-204ENST00000539241 IGLV10-54A0A075B6I4 117 aa9.02□□□□□ -0.97
CCND1-204ENST00000539241 IGLV4-3A0A075B6K6 122 aa9.02□□□□□ -0.97
CCND1-204ENST00000539241 IGIPA6NJ69 53 aa9.02□□□□□ -0.97
CCND1-204ENST00000539241 OXTP01178 125 aa9.02□□□□□ -0.97
CCND1-204ENST00000539241 RPL37AP61513 92 aaKnown RBP9.02□□□□□ -0.97
CCND1-204ENST00000539241 RNASE13Q5GAN3 156 aaKnown RBP9.02□□□□□ -0.97
CCND1-204ENST00000539241 KRTAP26-1Q6PEX3 210 aa9.02□□□□□ -0.97
CCND1-204ENST00000539241 TMEM141Q96I45 108 aa9.02□□□□□ -0.97
CCND1-204ENST00000539241 TIMM17AQ99595 171 aa9.02□□□□□ -0.97
CCND1-204ENST00000539241 OPRPNQ99935 248 aaPredicted RBP9.02□□□□□ -0.97
CCND1-204ENST00000539241 A0A096LNJ9 63 aa9.01□□□□□ -0.97
CCND1-204ENST00000539241 LINC00959A0A1B0GUT2 108 aa9.01□□□□□ -0.97
CCND1-204ENST00000539241 HBDP02042 147 aa9.01□□□□□ -0.97
CCND1-204ENST00000539241 Q6ZN92 141 aa9.01□□□□□ -0.97
CCND1-204ENST00000539241 ERASQ7Z444 233 aa9.01□□□□□ -0.97
CCND1-204ENST00000539241 C9orf163Q8N9P6 203 aa9.01□□□□□ -0.97
CCND1-204ENST00000539241 HMCN2Q8NDA2 5059 aa9.01□□□□□ -0.97
CCND1-204ENST00000539241 CCL25O15444 150 aa9□□□□□ -0.97
CCND1-204ENST00000539241 HIST1H2BKO60814 126 aa9□□□□□ -0.97
CCND1-204ENST00000539241 HIST1H2BJP06899 126 aa9□□□□□ -0.97
CCND1-204ENST00000539241 HIST1H2BOP23527 126 aa9□□□□□ -0.97
CCND1-204ENST00000539241 HIST1H2BBP33778 126 aa9□□□□□ -0.97
CCND1-204ENST00000539241 HIST1H2BDP58876 126 aa9□□□□□ -0.97
CCND1-204ENST00000539241 HIST1H2BCP62807 126 aa9□□□□□ -0.97
CCND1-204ENST00000539241 SS18Q15532 418 aa9□□□□□ -0.97
CCND1-204ENST00000539241 HIST2H2BEQ16778 126 aa9□□□□□ -0.97
CCND1-204ENST00000539241 PAPPA-AS1Q5QFB9 102 aa9□□□□□ -0.97
CCND1-204ENST00000539241 HIST2H2BFQ5QNW6 126 aaPredicted RBP9□□□□□ -0.97
CCND1-204ENST00000539241 SERTAD4-AS1Q5TG53 156 aa9□□□□□ -0.97
CCND1-204ENST00000539241 HIST1H2BHQ93079 126 aa9□□□□□ -0.97
CCND1-204ENST00000539241 SCGB3A1Q96QR1 104 aa9□□□□□ -0.97
CCND1-204ENST00000539241 HIST1H2BNQ99877 126 aa9□□□□□ -0.97
CCND1-204ENST00000539241 HIST1H2BMQ99879 126 aa9□□□□□ -0.97
CCND1-204ENST00000539241 HSBP1O75506 76 aa8.99□□□□□ -0.97
CCND1-204ENST00000539241 PMCHL1Q16048 86 aa8.99□□□□□ -0.97
CCND1-204ENST00000539241 TEX43Q6ZNM6 134 aa8.99□□□□□ -0.97
CCND1-204ENST00000539241 CHCHD10Q8WYQ3 142 aaPredicted RBP8.99□□□□□ -0.97
CCND1-204ENST00000539241 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.99□□□□□ -0.97
CCND1-204ENST00000539241 TRAV13-1A0A0B4J241 112 aa8.98□□□□□ -0.97
CCND1-204ENST00000539241 IFITM10A6NMD0 228 aa8.98□□□□□ -0.97
CCND1-204ENST00000539241 C1orf196B1AJZ1 125 aa8.98□□□□□ -0.97
CCND1-204ENST00000539241 SERF1AO75920 110 aa8.98□□□□□ -0.97
CCND1-204ENST00000539241 LINC00310P59036 64 aa8.98□□□□□ -0.97
CCND1-204ENST00000539241 AMELXQ99217 191 aa8.98□□□□□ -0.97
CCND1-204ENST00000539241 C2orf88Q9BSF0 95 aa8.98□□□□□ -0.97
CCND1-204ENST00000539241 GAGE12HA6NDE8 117 aa8.97□□□□□ -0.97
CCND1-204ENST00000539241 PANO1I0J062 215 aa8.97□□□□□ -0.97
CCND1-204ENST00000539241 XCL1P47992 114 aa8.97□□□□□ -0.97
CCND1-204ENST00000539241 PDZD11Q5EBL8 140 aa8.97□□□□□ -0.97
CCND1-204ENST00000539241 SDIM1Q6ZPB5 146 aa8.97□□□□□ -0.97
CCND1-204ENST00000539241 LINC00173Q6ZV60 143 aa8.97□□□□□ -0.97
CCND1-204ENST00000539241 VCX2Q9H322 139 aa8.97□□□□□ -0.97
CCND1-204ENST00000539241 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.96□□□□□ -0.98
CCND1-204ENST00000539241 HNRNPA3P51991 378 aaKnown RBP8.96□□□□□ -0.98
CCND1-204ENST00000539241 CNBPP62633 177 aaKnown RBP8.96□□□□□ -0.98
CCND1-204ENST00000539241 CD164L2Q6UWJ8 174 aa8.96□□□□□ -0.98
CCND1-204ENST00000539241 hDV102S1A0JD36 115 aa8.95□□□□□ -0.98
CCND1-204ENST00000539241 ATP5LO75964 103 aa8.95□□□□□ -0.98
CCND1-204ENST00000539241 FOXI1Q12951 378 aa8.95□□□□□ -0.98
CCND1-204ENST00000539241 UBE2D1P51668 147 aa8.94□□□□□ -0.98
CCND1-204ENST00000539241 ZC2HC1BQ5TFG8 222 aa8.94□□□□□ -0.98
CCND1-204ENST00000539241 FAM19A2Q8N3H0 131 aa8.94□□□□□ -0.98
CCND1-204ENST00000539241 NUPR1O60356 82 aa8.93□□□□□ -0.98
CCND1-204ENST00000539241 CIRBPQ14011 172 aaKnown RBP8.93□□□□□ -0.98
CCND1-204ENST00000539241 PMVKQ15126 192 aa8.93□□□□□ -0.98
CCND1-204ENST00000539241 COA6Q5JTJ3 125 aaKnown RBP8.93□□□□□ -0.98
CCND1-204ENST00000539241 IGHV3-64A0A075B6Q5 118 aa8.92□□□□□ -0.98
CCND1-204ENST00000539241 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.92□□□□□ -0.98
CCND1-204ENST00000539241 LINC00242Q5T6M2 205 aa8.92□□□□□ -0.98
CCND1-204ENST00000539241 FAM19A3Q7Z5A8 133 aa8.92□□□□□ -0.98
CCND1-204ENST00000539241 CST9LQ9H4G1 147 aa8.92□□□□□ -0.98
CCND1-204ENST00000539241 IGHV3OR16-9A0A0B4J2B5 98 aa8.91□□□□□ -0.98
CCND1-204ENST00000539241 COX7A2LO14548 114 aa8.91□□□□□ -0.98
CCND1-204ENST00000539241 SLPIP03973 132 aa8.91□□□□□ -0.98
CCND1-204ENST00000539241 SEC11AP67812 179 aa8.91□□□□□ -0.98
CCND1-204ENST00000539241 CFAP161Q6P656 301 aa8.91□□□□□ -0.98
CCND1-204ENST00000539241 IFI27L1Q96BM0 104 aa8.91□□□□□ -0.98
CCND1-204ENST00000539241 PLA2G2DQ9UNK4 145 aa8.91□□□□□ -0.98
CCND1-204ENST00000539241 LEPROTL1O95214 131 aa8.9□□□□□ -0.98
CCND1-204ENST00000539241 C15orf56Q8N910 161 aa8.9□□□□□ -0.98
CCND1-204ENST00000539241 DPH3Q96FX2 82 aa8.9□□□□□ -0.98
CCND1-204ENST00000539241 IGHV1-58A0A0C4DH39 117 aa8.89□□□□□ -0.99
CCND1-204ENST00000539241 CHTF8P0CG12 524 aa8.89□□□□□ -0.99
CCND1-204ENST00000539241 NDUFA6P56556 154 aa8.89□□□□□ -0.99
CCND1-204ENST00000539241 HERVK_113P63121 156 aa8.89□□□□□ -0.99
CCND1-204ENST00000539241 C5orf38Q86SI9 138 aa8.89□□□□□ -0.99
CCND1-204ENST00000539241 GEMIN7Q9H840 131 aaKnown RBP8.89□□□□□ -0.99
CCND1-204ENST00000539241 HSPB8Q9UJY1 196 aa8.89□□□□□ -0.99
CCND1-204ENST00000539241 A0A087WYN8 130 aa8.88□□□□□ -0.99
CCND1-204ENST00000539241 GVQW2A0A096LPI5 108 aaPredicted RBP8.88□□□□□ -0.99
CCND1-204ENST00000539241 A0A0J9YXV3 536 aa8.88□□□□□ -0.99
CCND1-204ENST00000539241 MALP21145 153 aa8.88□□□□□ -0.99
CCND1-204ENST00000539241 COX6A2Q02221 97 aa8.88□□□□□ -0.99
CCND1-204ENST00000539241 Q6ZRU5 148 aa8.88□□□□□ -0.99
CCND1-204ENST00000539241 SPACA4Q8TDM5 124 aa8.88□□□□□ -0.99
CCND1-204ENST00000539241 PACRGQ96M98 296 aaPredicted RBP8.88□□□□□ -0.99
CCND1-204ENST00000539241 A0A087WZ39 114 aa8.87□□□□□ -0.99
CCND1-204ENST00000539241 TRAV12-1A0A0B4J245 112 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 188.8 ms