RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 CAMK2N2Q96S95 79 aa8.52□□□□□ -1.05
PBX3-212ENST00000538998 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.51□□□□□ -1.05
PBX3-212ENST00000538998 MALP21145 153 aa8.51□□□□□ -1.05
PBX3-212ENST00000538998 HBBP68871 147 aa8.51□□□□□ -1.05
PBX3-212ENST00000538998 I3L3M4 83 aa8.5□□□□□ -1.05
PBX3-212ENST00000538998 RPL13AP40429 203 aaKnown RBP8.5□□□□□ -1.05
PBX3-212ENST00000538998 UBE2D1P51668 147 aa8.5□□□□□ -1.05
PBX3-212ENST00000538998 ATP5L2Q7Z4Y8 100 aa8.5□□□□□ -1.05
PBX3-212ENST00000538998 TRAV9-1A0A075B6T8 112 aa8.49□□□□□ -1.05
PBX3-212ENST00000538998 KRTAP1-4P0C5Y4 121 aa8.49□□□□□ -1.05
PBX3-212ENST00000538998 PMCHP20382 165 aa8.49□□□□□ -1.05
PBX3-212ENST00000538998 MRPL52Q86TS9 123 aaKnown RBP8.49□□□□□ -1.05
PBX3-212ENST00000538998 MRAP2Q96G30 205 aa8.49□□□□□ -1.05
PBX3-212ENST00000538998 C2orf48Q96LS8 159 aa8.49□□□□□ -1.05
PBX3-212ENST00000538998 TMEM191AQ9H0A3 160 aa8.49□□□□□ -1.05
PBX3-212ENST00000538998 CDC42SE2Q9NRR3 84 aa8.49□□□□□ -1.05
PBX3-212ENST00000538998 A0A087WZ39 114 aa8.48□□□□□ -1.05
PBX3-212ENST00000538998 COX7A2LO14548 114 aa8.48□□□□□ -1.05
PBX3-212ENST00000538998 ESDP10768 282 aa8.48□□□□□ -1.05
PBX3-212ENST00000538998 C1orf196B1AJZ1 125 aa8.47□□□□□ -1.05
PBX3-212ENST00000538998 RNF151Q2KHN1 245 aa8.47□□□□□ -1.05
PBX3-212ENST00000538998 AMN1Q8IY45 258 aa8.47□□□□□ -1.05
PBX3-212ENST00000538998 SMCO4Q9NRQ5 59 aa8.47□□□□□ -1.05
PBX3-212ENST00000538998 TRBV6-5A0A0K0K1A5 114 aa8.46□□□□□ -1.06
PBX3-212ENST00000538998 A0A1B0GXF2 115 aa8.46□□□□□ -1.06
PBX3-212ENST00000538998 RAB4AP20338 218 aa8.46□□□□□ -1.06
PBX3-212ENST00000538998 S100A1P23297 94 aa8.46□□□□□ -1.06
PBX3-212ENST00000538998 ATP6V1G1O75348 118 aa8.45□□□□□ -1.06
PBX3-212ENST00000538998 TSHBP01222 138 aa8.45□□□□□ -1.06
PBX3-212ENST00000538998 COX19Q49B96 90 aa8.45□□□□□ -1.06
PBX3-212ENST00000538998 FAM104BQ5XKR9 115 aa8.45□□□□□ -1.06
PBX3-212ENST00000538998 OPRPNQ99935 248 aaPredicted RBP8.45□□□□□ -1.06
PBX3-212ENST00000538998 TGIF2-C20orf24A0A0A6YYL0 155 aa8.44□□□□□ -1.06
PBX3-212ENST00000538998 CKS2P33552 79 aa8.44□□□□□ -1.06
PBX3-212ENST00000538998 CBLN2Q8IUK8 224 aa8.44□□□□□ -1.06
PBX3-212ENST00000538998 SPAG11BQ08648 103 aa8.43□□□□□ -1.06
PBX3-212ENST00000538998 MRPL51Q4U2R6 128 aaKnown RBP8.43□□□□□ -1.06
PBX3-212ENST00000538998 KRTAP11-1Q8IUC1 163 aa8.43□□□□□ -1.06
PBX3-212ENST00000538998 ST20Q9HBF5 79 aa8.43□□□□□ -1.06
PBX3-212ENST00000538998 SMKR1H3BMG3 65 aa8.42□□□□□ -1.06
PBX3-212ENST00000538998 PPP1R17O96001 155 aa8.42□□□□□ -1.06
PBX3-212ENST00000538998 TMEM136Q6ZRR5 245 aa8.42□□□□□ -1.06
PBX3-212ENST00000538998 OR10D4PQ8NGN7 298 aa8.42□□□□□ -1.06
PBX3-212ENST00000538998 GNB1LQ9BYB4 327 aa8.42□□□□□ -1.06
PBX3-212ENST00000538998 MRPL35Q9NZE8 188 aaKnown RBP8.42□□□□□ -1.06
PBX3-212ENST00000538998 TRBV24-1A0A075B6N3 115 aa8.41□□□□□ -1.06
PBX3-212ENST00000538998 FAM168BA1KXE4 195 aa8.41□□□□□ -1.06
PBX3-212ENST00000538998 F8WDY8 70 aa8.41□□□□□ -1.06
PBX3-212ENST00000538998 PPBPP02775 128 aa8.41□□□□□ -1.06
PBX3-212ENST00000538998 SMAGPQ0VAQ4 97 aa8.41□□□□□ -1.06
PBX3-212ENST00000538998 FAM19A5Q7Z5A7 132 aaPredicted RBP8.41□□□□□ -1.06
PBX3-212ENST00000538998 C5orf38Q86SI9 138 aa8.41□□□□□ -1.06
PBX3-212ENST00000538998 CSDC2Q9Y534 153 aaKnown RBP8.41□□□□□ -1.06
PBX3-212ENST00000538998 TRAV13-1A0A0B4J241 112 aa8.4□□□□□ -1.06
PBX3-212ENST00000538998 TRBV27A0A0K0K1C4 114 aa8.4□□□□□ -1.06
PBX3-212ENST00000538998 D6R8Y8 96 aa8.4□□□□□ -1.06
PBX3-212ENST00000538998 FABP9Q0Z7S8 132 aa8.4□□□□□ -1.06
PBX3-212ENST00000538998 ORMDL3Q8N138 153 aa8.4□□□□□ -1.06
PBX3-212ENST00000538998 TRAPPC1Q9Y5R8 145 aa8.4□□□□□ -1.06
PBX3-212ENST00000538998 SCO1O75880 301 aa8.39□□□□□ -1.07
PBX3-212ENST00000538998 POLR2KP53803 58 aaKnown RBP8.39□□□□□ -1.07
PBX3-212ENST00000538998 UBE2BP63146 152 aa8.39□□□□□ -1.07
PBX3-212ENST00000538998 PRELID3AQ96N28 172 aa8.39□□□□□ -1.07
PBX3-212ENST00000538998 MRPL18Q9H0U6 180 aaKnown RBP8.39□□□□□ -1.07
PBX3-212ENST00000538998 NDUFA1O15239 70 aa8.38□□□□□ -1.07
PBX3-212ENST00000538998 TSPAN13O95857 204 aa8.38□□□□□ -1.07
PBX3-212ENST00000538998 TLX1NBP0CAT3 122 aa8.38□□□□□ -1.07
PBX3-212ENST00000538998 KIAA1644Q3SXP7 199 aa8.38□□□□□ -1.07
PBX3-212ENST00000538998 RNASE13Q5GAN3 156 aaKnown RBP8.38□□□□□ -1.07
PBX3-212ENST00000538998 UBE2D4Q9Y2X8 147 aa8.38□□□□□ -1.07
PBX3-212ENST00000538998 M0QXV9 152 aa8.37□□□□□ -1.07
PBX3-212ENST00000538998 TNFRSF6BO95407 300 aa8.37□□□□□ -1.07
PBX3-212ENST00000538998 FCER1GP30273 86 aa8.37□□□□□ -1.07
PBX3-212ENST00000538998 VCYO14598 125 aa8.36□□□□□ -1.07
PBX3-212ENST00000538998 NPYP01303 97 aa8.36□□□□□ -1.07
PBX3-212ENST00000538998 SUMO2P61956 95 aaKnown RBP8.36□□□□□ -1.07
PBX3-212ENST00000538998 NRACQ8N912 160 aa8.36□□□□□ -1.07
PBX3-212ENST00000538998 ORAOV1Q8WV07 137 aa8.36□□□□□ -1.07
PBX3-212ENST00000538998 YPEL4Q96NS1 127 aa8.36□□□□□ -1.07
PBX3-212ENST00000538998 C20orf78Q9BR46 151 aa8.36□□□□□ -1.07
PBX3-212ENST00000538998 MAP1LC3AQ9H492 121 aa8.36□□□□□ -1.07
PBX3-212ENST00000538998 LAMTOR2Q9Y2Q5 125 aa8.36□□□□□ -1.07
PBX3-212ENST00000538998 LOC389332A0A1B0GUA5 103 aa8.35□□□□□ -1.07
PBX3-212ENST00000538998 GAGE2EQ4V326 116 aa8.35□□□□□ -1.07
PBX3-212ENST00000538998 GAGE2DQ9UEU5 116 aa8.35□□□□□ -1.07
PBX3-212ENST00000538998 ZNF861PO60384 105 aa8.34□□□□□ -1.07
PBX3-212ENST00000538998 C10orf25Q5T742 122 aa8.34□□□□□ -1.07
PBX3-212ENST00000538998 Q6ZUT4 128 aa8.34□□□□□ -1.07
PBX3-212ENST00000538998 KRTAP7-1Q8IUC3 87 aa8.34□□□□□ -1.07
PBX3-212ENST00000538998 KIR2DL4Q99706 377 aa8.34□□□□□ -1.07
PBX3-212ENST00000538998 COLCA2A8K830 154 aa8.33□□□□□ -1.08
PBX3-212ENST00000538998 RAB5AP20339 215 aa8.33□□□□□ -1.08
PBX3-212ENST00000538998 UNQ6190/PRO20217Q6UXQ8 127 aa8.33□□□□□ -1.08
PBX3-212ENST00000538998 TIMM21Q9BVV7 248 aa8.33□□□□□ -1.08
PBX3-212ENST00000538998 C6orf48Q9UBA6 75 aa8.33□□□□□ -1.08
PBX3-212ENST00000538998 TMEM18Q96B42 140 aa8.32□□□□□ -1.08
PBX3-212ENST00000538998 ALKBH7Q9BT30 221 aaPredicted RBP8.32□□□□□ -1.08
PBX3-212ENST00000538998 SMIM2Q9BVW6 85 aa8.32□□□□□ -1.08
PBX3-212ENST00000538998 IGHV3OR16-9A0A0B4J2B5 98 aa8.31□□□□□ -1.08
PBX3-212ENST00000538998 TCAPO15273 167 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms