RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 PHF5AQ7RTV0 110 aaKnown RBP7.67□□□□□ -1.18
VAMP1-206ENST00000538970 OPRPNQ99935 248 aaPredicted RBP7.67□□□□□ -1.18
VAMP1-206ENST00000538970 SMIM2Q9BVW6 85 aa7.67□□□□□ -1.18
VAMP1-206ENST00000538970 NAT8Q9UHE5 227 aa7.67□□□□□ -1.18
VAMP1-206ENST00000538970 TNFRSF6BO95407 300 aa7.66□□□□□ -1.18
VAMP1-206ENST00000538970 MT-ND6P03923 174 aa7.66□□□□□ -1.18
VAMP1-206ENST00000538970 ORAOV1Q8WV07 137 aa7.66□□□□□ -1.18
VAMP1-206ENST00000538970 SPANXA1Q9NS26 97 aa7.66□□□□□ -1.18
VAMP1-206ENST00000538970 MRPL35Q9NZE8 188 aaKnown RBP7.66□□□□□ -1.18
VAMP1-206ENST00000538970 IGHV3OR16-9A0A0B4J2B5 98 aa7.65□□□□□ -1.18
VAMP1-206ENST00000538970 D6R8Y8 96 aa7.65□□□□□ -1.18
VAMP1-206ENST00000538970 MRPS36P82909 103 aaKnown RBP7.65□□□□□ -1.18
VAMP1-206ENST00000538970 C1orf137Q5JT78 98 aa7.65□□□□□ -1.18
VAMP1-206ENST00000538970 A0A1B0GXF2 115 aa7.64□□□□□ -1.19
VAMP1-206ENST00000538970 IFITM10A6NMD0 228 aa7.64□□□□□ -1.19
VAMP1-206ENST00000538970 F8WDY8 70 aa7.64□□□□□ -1.19
VAMP1-206ENST00000538970 NPYP01303 97 aa7.64□□□□□ -1.19
VAMP1-206ENST00000538970 HBBP68871 147 aa7.64□□□□□ -1.19
VAMP1-206ENST00000538970 SRSF3P84103 164 aaKnown RBP7.64□□□□□ -1.19
VAMP1-206ENST00000538970 MRPL54Q6P161 138 aaKnown RBP7.64□□□□□ -1.19
VAMP1-206ENST00000538970 LPAP08519 4548 aa7.63□□□□□ -1.19
VAMP1-206ENST00000538970 NDUFA1O15239 70 aa7.63□□□□□ -1.19
VAMP1-206ENST00000538970 S100A8P05109 93 aa7.63□□□□□ -1.19
VAMP1-206ENST00000538970 C10orf25Q5T742 122 aa7.63□□□□□ -1.19
VAMP1-206ENST00000538970 IMMP2LQ96T52 175 aa7.63□□□□□ -1.19
VAMP1-206ENST00000538970 FAM168BA1KXE4 195 aa7.62□□□□□ -1.19
VAMP1-206ENST00000538970 F8W036 122 aa7.62□□□□□ -1.19
VAMP1-206ENST00000538970 IGLV7-43P04211 117 aa7.62□□□□□ -1.19
VAMP1-206ENST00000538970 TLX1NBP0CAT3 122 aa7.62□□□□□ -1.19
VAMP1-206ENST00000538970 C6orf48Q9UBA6 75 aa7.62□□□□□ -1.19
VAMP1-206ENST00000538970 PPBPP02775 128 aa7.61□□□□□ -1.19
VAMP1-206ENST00000538970 PEA15Q15121 130 aa7.61□□□□□ -1.19
VAMP1-206ENST00000538970 UNQ6190/PRO20217Q6UXQ8 127 aa7.61□□□□□ -1.19
VAMP1-206ENST00000538970 KRTAP11-1Q8IUC1 163 aa7.61□□□□□ -1.19
VAMP1-206ENST00000538970 TGIF2-C20orf24A0A0A6YYL0 155 aa7.6□□□□□ -1.19
VAMP1-206ENST00000538970 IFI27P40305 119 aaPredicted RBP7.6□□□□□ -1.19
VAMP1-206ENST00000538970 FAM19A5Q7Z5A7 132 aaPredicted RBP7.6□□□□□ -1.19
VAMP1-206ENST00000538970 ORMDL3Q8N138 153 aa7.6□□□□□ -1.19
VAMP1-206ENST00000538970 DIRC1Q969H9 104 aa7.6□□□□□ -1.19
VAMP1-206ENST00000538970 SMDT1Q9H4I9 107 aa7.6□□□□□ -1.19
VAMP1-206ENST00000538970 IGLV4-3A0A075B6K6 122 aa7.59□□□□□ -1.19
VAMP1-206ENST00000538970 A0A087WZ39 114 aa7.59□□□□□ -1.19
VAMP1-206ENST00000538970 KIAA0087Q14695 138 aa7.59□□□□□ -1.19
VAMP1-206ENST00000538970 LINC00242Q5T6M2 205 aa7.59□□□□□ -1.19
VAMP1-206ENST00000538970 KRTAP7-1Q8IUC3 87 aa7.59□□□□□ -1.19
VAMP1-206ENST00000538970 PYGO1Q9Y3Y4 419 aa7.59□□□□□ -1.19
VAMP1-206ENST00000538970 MUC2Q02817 5179 aa7.58□□□□□ -1.2
VAMP1-206ENST00000538970 H0Y9J4 135 aa7.58□□□□□ -1.2
VAMP1-206ENST00000538970 RAB5AP20339 215 aa7.58□□□□□ -1.2
VAMP1-206ENST00000538970 GAGE2EQ4V326 116 aa7.58□□□□□ -1.2
VAMP1-206ENST00000538970 TMEM136Q6ZRR5 245 aa7.58□□□□□ -1.2
VAMP1-206ENST00000538970 ATP5L2Q7Z4Y8 100 aa7.58□□□□□ -1.2
VAMP1-206ENST00000538970 PRR26Q8N8Z3 221 aa7.58□□□□□ -1.2
VAMP1-206ENST00000538970 PRELID3AQ96N28 172 aa7.58□□□□□ -1.2
VAMP1-206ENST00000538970 GAGE2DQ9UEU5 116 aa7.58□□□□□ -1.2
VAMP1-206ENST00000538970 FAT4Q6V0I7 4981 aa7.57□□□□□ -1.2
VAMP1-206ENST00000538970 A0A1B0GVG6 124 aa7.57□□□□□ -1.2
VAMP1-206ENST00000538970 TRBV30A0A0K0K1B3 111 aa7.56□□□□□ -1.2
VAMP1-206ENST00000538970 M0QXV9 152 aa7.56□□□□□ -1.2
VAMP1-206ENST00000538970 C2orf82Q6UX34 121 aa7.56□□□□□ -1.2
VAMP1-206ENST00000538970 TMEM141Q96I45 108 aa7.56□□□□□ -1.2
VAMP1-206ENST00000538970 PRSS47A8MTI9 375 aa7.55□□□□□ -1.2
VAMP1-206ENST00000538970 KRTAP1-4P0C5Y4 121 aa7.55□□□□□ -1.2
VAMP1-206ENST00000538970 UBE2D1P51668 147 aa7.55□□□□□ -1.2
VAMP1-206ENST00000538970 C9orf129Q5T035 196 aaKnown RBP7.55□□□□□ -1.2
VAMP1-206ENST00000538970 TEX43Q6ZNM6 134 aa7.55□□□□□ -1.2
VAMP1-206ENST00000538970 LAMTOR2Q9Y2Q5 125 aa7.55□□□□□ -1.2
VAMP1-206ENST00000538970 NDUFC2-KCTD14E9PQ53 114 aa7.54□□□□□ -1.2
VAMP1-206ENST00000538970 UBE2BP63146 152 aa7.54□□□□□ -1.2
VAMP1-206ENST00000538970 LINC01561Q8N1V8 128 aa7.54□□□□□ -1.2
VAMP1-206ENST00000538970 MAP1LC3AQ9H492 121 aa7.54□□□□□ -1.2
VAMP1-206ENST00000538970 IGLV1-50A0A075B6I6 118 aa7.53□□□□□ -1.2
VAMP1-206ENST00000538970 LOC389332A0A1B0GUA5 103 aa7.53□□□□□ -1.2
VAMP1-206ENST00000538970 LINC00173Q6ZV60 143 aa7.53□□□□□ -1.2
VAMP1-206ENST00000538970 PACRGQ96M98 296 aaPredicted RBP7.53□□□□□ -1.2
VAMP1-206ENST00000538970 C2orf88Q9BSF0 95 aa7.53□□□□□ -1.2
VAMP1-206ENST00000538970 CYSLTR1Q9Y271 337 aa7.53□□□□□ -1.2
VAMP1-206ENST00000538970 ZC2HC1BQ5TFG8 222 aa7.52□□□□□ -1.21
VAMP1-206ENST00000538970 C2orf66Q6UXQ4 117 aa7.52□□□□□ -1.21
VAMP1-206ENST00000538970 Q8N8P6 123 aa7.52□□□□□ -1.21
VAMP1-206ENST00000538970 AMELXQ99217 191 aa7.52□□□□□ -1.21
VAMP1-206ENST00000538970 Q6ZN92 141 aa7.51□□□□□ -1.21
VAMP1-206ENST00000538970 PRSS2P07478 247 aa7.5□□□□□ -1.21
VAMP1-206ENST00000538970 NPSP0C0P6 89 aa7.5□□□□□ -1.21
VAMP1-206ENST00000538970 ORMDL2Q53FV1 153 aa7.5□□□□□ -1.21
VAMP1-206ENST00000538970 FAM19A3Q7Z5A8 133 aa7.5□□□□□ -1.21
VAMP1-206ENST00000538970 VCX2Q9H322 139 aa7.5□□□□□ -1.21
VAMP1-206ENST00000538970 IGIPA6NJ69 53 aa7.49□□□□□ -1.21
VAMP1-206ENST00000538970 CKS1BP61024 79 aa7.49□□□□□ -1.21
VAMP1-206ENST00000538970 PNRC1Q12796 327 aaPredicted RBP7.49□□□□□ -1.21
VAMP1-206ENST00000538970 Q8IZM0 81 aa7.49□□□□□ -1.21
VAMP1-206ENST00000538970 TOMM7Q9P0U1 55 aa7.49□□□□□ -1.21
VAMP1-206ENST00000538970 K7EMI3 77 aa7.48□□□□□ -1.21
VAMP1-206ENST00000538970 RPL13AP40429 203 aaKnown RBP7.48□□□□□ -1.21
VAMP1-206ENST00000538970 LINC00469Q8N7U9 141 aa7.48□□□□□ -1.21
VAMP1-206ENST00000538970 ANAPC16Q96DE5 110 aa7.48□□□□□ -1.21
VAMP1-206ENST00000538970 ZNF861PO60384 105 aa7.47□□□□□ -1.21
VAMP1-206ENST00000538970 MT-ND4LP03901 98 aa7.47□□□□□ -1.21
VAMP1-206ENST00000538970 C6orf226Q5I0X4 101 aa7.47□□□□□ -1.21
VAMP1-206ENST00000538970 LCE2AQ5TA79 106 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms