RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 C3orf79P0CE67 100 aa15.61■□□□□ 0.09
TMEM260-202ENST00000538838 KRTDAPP60985 99 aa15.61■□□□□ 0.09
TMEM260-202ENST00000538838 CD164L2Q6UWJ8 174 aa15.61■□□□□ 0.09
TMEM260-202ENST00000538838 FRAS1Q86XX4 4008 aa15.61■□□□□ 0.09
TMEM260-202ENST00000538838 SYS1-DBNDD2H3BUS1 97 aa15.6■□□□□ 0.09
TMEM260-202ENST00000538838 RTL8CO15255 209 aa15.6■□□□□ 0.09
TMEM260-202ENST00000538838 ODF1Q14990 250 aa15.6■□□□□ 0.09
TMEM260-202ENST00000538838 SPATA12Q7Z6I5 190 aa15.6■□□□□ 0.09
TMEM260-202ENST00000538838 RYR3Q15413 4870 aa15.59■□□□□ 0.09
TMEM260-202ENST00000538838 MRPL35Q9NZE8 188 aaKnown RBP15.59■□□□□ 0.09
TMEM260-202ENST00000538838 IGHV3OR16-9A0A0B4J2B5 98 aa15.57■□□□□ 0.08
TMEM260-202ENST00000538838 TINCRA0A1B0GVN0 87 aa15.57■□□□□ 0.08
TMEM260-202ENST00000538838 F8VRH5 84 aa15.57■□□□□ 0.08
TMEM260-202ENST00000538838 IGLC3P0DOY3 106 aa15.57■□□□□ 0.08
TMEM260-202ENST00000538838 SEC11AP67812 179 aa15.57■□□□□ 0.08
TMEM260-202ENST00000538838 PMCHL2Q9BQD1 86 aa15.57■□□□□ 0.08
TMEM260-202ENST00000538838 CHAC1Q9BUX1 264 aa15.57■□□□□ 0.08
TMEM260-202ENST00000538838 GEMIN7Q9H840 131 aaKnown RBP15.57■□□□□ 0.08
TMEM260-202ENST00000538838 HERVK_113P63121 156 aa15.57■□□□□ 0.08
TMEM260-202ENST00000538838 C5orf38Q86SI9 138 aa15.57■□□□□ 0.08
TMEM260-202ENST00000538838 C11orf86A6NJI1 115 aa15.56■□□□□ 0.08
TMEM260-202ENST00000538838 COX7A2LO14548 114 aa15.54■□□□□ 0.08
TMEM260-202ENST00000538838 LECT2O14960 151 aa15.54■□□□□ 0.08
TMEM260-202ENST00000538838 PET117Q6UWS5 81 aa15.54■□□□□ 0.08
TMEM260-202ENST00000538838 LINC00469Q8N7U9 141 aa15.54■□□□□ 0.08
TMEM260-202ENST00000538838 CDKN2A-AS1Q9UH64 79 aa15.54■□□□□ 0.08
TMEM260-202ENST00000538838 WFDC2Q14508 124 aa15.54■□□□□ 0.08
TMEM260-202ENST00000538838 LINC01545Q5VT33 79 aa15.53■□□□□ 0.08
TMEM260-202ENST00000538838 DNAH17Q9UFH2 4485 aa15.52■□□□□ 0.08
TMEM260-202ENST00000538838 IGLV5-45A0A087WSX0 123 aa15.52■□□□□ 0.08
TMEM260-202ENST00000538838 OR10D4PQ8NGN7 298 aa15.52■□□□□ 0.08
TMEM260-202ENST00000538838 LRCOL1A6NCL2 159 aa15.51■□□□□ 0.07
TMEM260-202ENST00000538838 ZNF22P17026 224 aaPredicted RBP15.51■□□□□ 0.07
TMEM260-202ENST00000538838 A0A087WZ39 114 aa15.5■□□□□ 0.07
TMEM260-202ENST00000538838 USP17L23D6RBM5 183 aa15.5■□□□□ 0.07
TMEM260-202ENST00000538838 MALP21145 153 aa15.5■□□□□ 0.07
TMEM260-202ENST00000538838 TNP2Q05952 138 aa15.5■□□□□ 0.07
TMEM260-202ENST00000538838 DPM2O94777 84 aa15.5■□□□□ 0.07
TMEM260-202ENST00000538838 C15orf56Q8N910 161 aa15.5■□□□□ 0.07
TMEM260-202ENST00000538838 PLNP26678 52 aa15.49■□□□□ 0.07
TMEM260-202ENST00000538838 TMEM170BQ5T4T1 132 aa15.48■□□□□ 0.07
TMEM260-202ENST00000538838 IGKCP01834 107 aa15.47■□□□□ 0.07
TMEM260-202ENST00000538838 A0A087WTM6 91 aa15.46■□□□□ 0.07
TMEM260-202ENST00000538838 C20orf202A1L168 122 aa15.46■□□□□ 0.07
TMEM260-202ENST00000538838 IGHV1-58A0A0C4DH39 117 aa15.46■□□□□ 0.06
TMEM260-202ENST00000538838 SPINK8P0C7L1 97 aa15.46■□□□□ 0.06
TMEM260-202ENST00000538838 SMIM1B2RUZ4 78 aa15.45■□□□□ 0.06
TMEM260-202ENST00000538838 H3BRM9 83 aa15.45■□□□□ 0.06
TMEM260-202ENST00000538838 HIGD2BQ4VC39 106 aa15.45■□□□□ 0.06
TMEM260-202ENST00000538838 APOMO95445 188 aa15.44■□□□□ 0.06
TMEM260-202ENST00000538838 CFAP161Q6P656 301 aa15.44■□□□□ 0.06
TMEM260-202ENST00000538838 LINC01561Q8N1V8 128 aa15.44■□□□□ 0.06
TMEM260-202ENST00000538838 ORAOV1Q8WV07 137 aa15.44■□□□□ 0.06
TMEM260-202ENST00000538838 FAT2Q9NYQ8 4349 aa15.44■□□□□ 0.06
TMEM260-202ENST00000538838 IGHV3-64A0A075B6Q5 118 aa15.43■□□□□ 0.06
TMEM260-202ENST00000538838 LINC00336Q6ZUF6 198 aa15.43■□□□□ 0.06
TMEM260-202ENST00000538838 GVQW2A0A096LPI5 108 aaPredicted RBP15.42■□□□□ 0.06
TMEM260-202ENST00000538838 hDV102S1A0JD36 115 aa15.41■□□□□ 0.06
TMEM260-202ENST00000538838 TMEM223A0PJW6 202 aa15.41■□□□□ 0.06
TMEM260-202ENST00000538838 ATOH7Q8N100 152 aa15.41■□□□□ 0.06
TMEM260-202ENST00000538838 LINC00526Q96FQ7 95 aa15.41■□□□□ 0.06
TMEM260-202ENST00000538838 SPAG11BQ08648 103 aa15.4■□□□□ 0.06
TMEM260-202ENST00000538838 Q8N814 137 aa15.4■□□□□ 0.06
TMEM260-202ENST00000538838 C14orf177Q52M58 125 aa15.39■□□□□ 0.05
TMEM260-202ENST00000538838 SCGB1D1O95968 90 aa15.39■□□□□ 0.05
TMEM260-202ENST00000538838 TOMM7Q9P0U1 55 aa15.39■□□□□ 0.05
TMEM260-202ENST00000538838 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.38■□□□□ 0.05
TMEM260-202ENST00000538838 IGLV5-39A0A0G2JS06 123 aa15.37■□□□□ 0.05
TMEM260-202ENST00000538838 EREGO14944 169 aa15.37■□□□□ 0.05
TMEM260-202ENST00000538838 ZNF561-AS1K7EIQ3 104 aa15.36■□□□□ 0.05
TMEM260-202ENST00000538838 KIAA0087Q14695 138 aa15.35■□□□□ 0.05
TMEM260-202ENST00000538838 STPG4Q8N801 248 aa15.35■□□□□ 0.05
TMEM260-202ENST00000538838 COX7B2Q8TF08 81 aa15.35■□□□□ 0.05
TMEM260-202ENST00000538838 DNAH11Q96DT5 4516 aa15.35■□□□□ 0.05
TMEM260-202ENST00000538838 PKD1P98161 4303 aa15.34■□□□□ 0.05
TMEM260-202ENST00000538838 PRSS2P07478 247 aa15.34■□□□□ 0.05
TMEM260-202ENST00000538838 AKR1D1P51857 326 aa15.34■□□□□ 0.05
TMEM260-202ENST00000538838 Q8IZM0 81 aa15.34■□□□□ 0.05
TMEM260-202ENST00000538838 FUSP35637 526 aaKnown RBP eCLIP15.33■□□□□ 0.04
TMEM260-202ENST00000538838 HERVK_113P61574 105 aa15.33■□□□□ 0.04
TMEM260-202ENST00000538838 SLPIP03973 132 aa15.32■□□□□ 0.04
TMEM260-202ENST00000538838 JOSD1Q15040 202 aaPredicted RBP15.32■□□□□ 0.04
TMEM260-202ENST00000538838 NTN5Q8WTR8 489 aaPredicted RBP15.32■□□□□ 0.04
TMEM260-202ENST00000538838 C2orf82Q6UX34 121 aa15.31■□□□□ 0.04
TMEM260-202ENST00000538838 KRTAP10-2P60368 255 aa15.3■□□□□ 0.04
TMEM260-202ENST00000538838 MAJINQ3KP22 176 aa15.3■□□□□ 0.04
TMEM260-202ENST00000538838 C6orf226Q5I0X4 101 aa15.3■□□□□ 0.04
TMEM260-202ENST00000538838 CAMK2N2Q96S95 79 aa15.3■□□□□ 0.04
TMEM260-202ENST00000538838 HECTD4Q9Y4D8 3996 aa15.29■□□□□ 0.04
TMEM260-202ENST00000538838 TSPEAR-AS2P59090 65 aa15.29■□□□□ 0.04
TMEM260-202ENST00000538838 PYY3Q5JQD4 70 aa15.29■□□□□ 0.04
TMEM260-202ENST00000538838 C2orf48Q96LS8 159 aa15.29■□□□□ 0.04
TMEM260-202ENST00000538838 A0A1B0GVY2 172 aa15.28■□□□□ 0.04
TMEM260-202ENST00000538838 LEPROTO15243 131 aa15.28■□□□□ 0.04
TMEM260-202ENST00000538838 E9PLD3 99 aa15.28■□□□□ 0.04
TMEM260-202ENST00000538838 CNBPP62633 177 aaKnown RBP15.28■□□□□ 0.04
TMEM260-202ENST00000538838 Q6ZRU5 148 aa15.28■□□□□ 0.04
TMEM260-202ENST00000538838 LOC105371267A0A1B0GV96 52 aa15.27■□□□□ 0.03
TMEM260-202ENST00000538838 CKS1BP61024 79 aa15.27■□□□□ 0.03
TMEM260-202ENST00000538838 SYCNQ0VAF6 134 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms