RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 Q8N8P6 123 aa9.39□□□□□ -0.91
RAB40B-202ENST00000538809 SEC11CQ9BY50 192 aa9.39□□□□□ -0.91
RAB40B-202ENST00000538809 CTDSP1Q9GZU7 261 aa9.39□□□□□ -0.91
RAB40B-202ENST00000538809 MAP1LC3AQ9H492 121 aa9.39□□□□□ -0.91
RAB40B-202ENST00000538809 PKIGQ9Y2B9 76 aa9.39□□□□□ -0.91
RAB40B-202ENST00000538809 IGLV4-3A0A075B6K6 122 aa9.38□□□□□ -0.91
RAB40B-202ENST00000538809 LOC389332A0A1B0GUA5 103 aa9.38□□□□□ -0.91
RAB40B-202ENST00000538809 RAB5AP20339 215 aa9.38□□□□□ -0.91
RAB40B-202ENST00000538809 CAMK2N2Q96S95 79 aa9.38□□□□□ -0.91
RAB40B-202ENST00000538809 TRAV9-1A0A075B6T8 112 aa9.37□□□□□ -0.91
RAB40B-202ENST00000538809 IFI27P40305 119 aaPredicted RBP9.37□□□□□ -0.91
RAB40B-202ENST00000538809 PRR3P79522 188 aaKnown RBP9.37□□□□□ -0.91
RAB40B-202ENST00000538809 SPAG11BQ08648 103 aa9.37□□□□□ -0.91
RAB40B-202ENST00000538809 GAGE2BQ13066 116 aa9.37□□□□□ -0.91
RAB40B-202ENST00000538809 C2orf48Q96LS8 159 aa9.37□□□□□ -0.91
RAB40B-202ENST00000538809 LINC00474Q9P2X8 69 aa9.37□□□□□ -0.91
RAB40B-202ENST00000538809 LOC107984640A0A0U1RRK4 108 aa9.36□□□□□ -0.91
RAB40B-202ENST00000538809 IFITM10A6NMD0 228 aa9.36□□□□□ -0.91
RAB40B-202ENST00000538809 APOMO95445 188 aa9.36□□□□□ -0.91
RAB40B-202ENST00000538809 PTTG1IPP53801 180 aa9.36□□□□□ -0.91
RAB40B-202ENST00000538809 C10orf91Q5T1B1 145 aa9.36□□□□□ -0.91
RAB40B-202ENST00000538809 COMMD7Q86VX2 200 aa9.36□□□□□ -0.91
RAB40B-202ENST00000538809 HMCN2Q8NDA2 5059 aa9.36□□□□□ -0.91
RAB40B-202ENST00000538809 MT1HL1P0DM35 61 aa9.35□□□□□ -0.91
RAB40B-202ENST00000538809 SERTAD4-AS1Q5TG53 156 aa9.35□□□□□ -0.91
RAB40B-202ENST00000538809 C2orf66Q6UXQ4 117 aa9.35□□□□□ -0.91
RAB40B-202ENST00000538809 OR10D4PQ8NGN7 298 aa9.35□□□□□ -0.91
RAB40B-202ENST00000538809 A0A0J9YXV3 536 aa9.34□□□□□ -0.91
RAB40B-202ENST00000538809 K7EMI3 77 aa9.34□□□□□ -0.91
RAB40B-202ENST00000538809 LINC00242Q5T6M2 205 aa9.34□□□□□ -0.91
RAB40B-202ENST00000538809 LINC00173Q6ZV60 143 aa9.34□□□□□ -0.91
RAB40B-202ENST00000538809 ORAOV1Q8WV07 137 aa9.34□□□□□ -0.91
RAB40B-202ENST00000538809 TMEM141Q96I45 108 aa9.34□□□□□ -0.91
RAB40B-202ENST00000538809 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.33□□□□□ -0.92
RAB40B-202ENST00000538809 RPL18AQ02543 176 aaKnown RBP9.33□□□□□ -0.92
RAB40B-202ENST00000538809 ORMDL2Q53FV1 153 aa9.33□□□□□ -0.92
RAB40B-202ENST00000538809 AMELXQ99217 191 aa9.33□□□□□ -0.92
RAB40B-202ENST00000538809 NXT2Q9NPJ8 142 aaKnown RBP9.33□□□□□ -0.92
RAB40B-202ENST00000538809 CYSLTR1Q9Y271 337 aa9.33□□□□□ -0.92
RAB40B-202ENST00000538809 CARHSP1Q9Y2V2 147 aaKnown RBP9.33□□□□□ -0.92
RAB40B-202ENST00000538809 A0A087WZ39 114 aa9.32□□□□□ -0.92
RAB40B-202ENST00000538809 IGIPA6NJ69 53 aa9.32□□□□□ -0.92
RAB40B-202ENST00000538809 NPSP0C0P6 89 aa9.32□□□□□ -0.92
RAB40B-202ENST00000538809 UBE2D1P51668 147 aa9.32□□□□□ -0.92
RAB40B-202ENST00000538809 RNF151Q2KHN1 245 aa9.32□□□□□ -0.92
RAB40B-202ENST00000538809 KIAA1644Q3SXP7 199 aa9.32□□□□□ -0.92
RAB40B-202ENST00000538809 A0A1W2PNN7 141 aa9.31□□□□□ -0.92
RAB40B-202ENST00000538809 F8WDY8 70 aa9.31□□□□□ -0.92
RAB40B-202ENST00000538809 ZC2HC1BQ5TFG8 222 aa9.31□□□□□ -0.92
RAB40B-202ENST00000538809 TEX43Q6ZNM6 134 aa9.31□□□□□ -0.92
RAB40B-202ENST00000538809 GNB1LQ9BYB4 327 aa9.31□□□□□ -0.92
RAB40B-202ENST00000538809 TGIF2-C20orf24A0A0A6YYL0 155 aa9.3□□□□□ -0.92
RAB40B-202ENST00000538809 KIAA0087Q14695 138 aa9.3□□□□□ -0.92
RAB40B-202ENST00000538809 FAM19A3Q7Z5A8 133 aa9.3□□□□□ -0.92
RAB40B-202ENST00000538809 MRPL35Q9NZE8 188 aaKnown RBP9.3□□□□□ -0.92
RAB40B-202ENST00000538809 PLA2G2DQ9UNK4 145 aa9.3□□□□□ -0.92
RAB40B-202ENST00000538809 TNXBP22105 4242 aa9.3□□□□□ -0.92
RAB40B-202ENST00000538809 S100PP25815 95 aa9.29□□□□□ -0.92
RAB40B-202ENST00000538809 C9orf116Q5BN46 136 aaPredicted RBP9.29□□□□□ -0.92
RAB40B-202ENST00000538809 C10orf25Q5T742 122 aa9.29□□□□□ -0.92
RAB40B-202ENST00000538809 LINC01546A6NGU7 62 aa9.28□□□□□ -0.92
RAB40B-202ENST00000538809 NDUFA1O15239 70 aa9.28□□□□□ -0.92
RAB40B-202ENST00000538809 RHEBQ15382 184 aa9.28□□□□□ -0.92
RAB40B-202ENST00000538809 UNQ6190/PRO20217Q6UXQ8 127 aa9.28□□□□□ -0.92
RAB40B-202ENST00000538809 LINC01561Q8N1V8 128 aa9.28□□□□□ -0.92
RAB40B-202ENST00000538809 TOMM6Q96B49 74 aa9.28□□□□□ -0.92
RAB40B-202ENST00000538809 ALKBH7Q9BT30 221 aaPredicted RBP9.28□□□□□ -0.92
RAB40B-202ENST00000538809 COX19Q49B96 90 aa9.27□□□□□ -0.93
RAB40B-202ENST00000538809 Q6ZN92 141 aa9.27□□□□□ -0.93
RAB40B-202ENST00000538809 Q6ZRP5 223 aa9.27□□□□□ -0.93
RAB40B-202ENST00000538809 TIMM17AQ99595 171 aa9.27□□□□□ -0.93
RAB40B-202ENST00000538809 C2orf88Q9BSF0 95 aa9.27□□□□□ -0.93
RAB40B-202ENST00000538809 C6orf48Q9UBA6 75 aa9.27□□□□□ -0.93
RAB40B-202ENST00000538809 TLX1NBP0CAT3 122 aa9.26□□□□□ -0.93
RAB40B-202ENST00000538809 PHF5AQ7RTV0 110 aaKnown RBP9.26□□□□□ -0.93
RAB40B-202ENST00000538809 VCX2Q9H322 139 aa9.26□□□□□ -0.93
RAB40B-202ENST00000538809 RPS10P5Q9NQ39 176 aa9.26□□□□□ -0.93
RAB40B-202ENST00000538809 MT-ND6P03923 174 aa9.25□□□□□ -0.93
RAB40B-202ENST00000538809 G0S2P27469 103 aa9.25□□□□□ -0.93
RAB40B-202ENST00000538809 SPINK6Q6UWN8 80 aa9.24□□□□□ -0.93
RAB40B-202ENST00000538809 MRPL18Q9H0U6 180 aaKnown RBP9.24□□□□□ -0.93
RAB40B-202ENST00000538809 FAM168BA1KXE4 195 aa9.23□□□□□ -0.93
RAB40B-202ENST00000538809 ODF1Q14990 250 aa9.23□□□□□ -0.93
RAB40B-202ENST00000538809 C2orf82Q6UX34 121 aa9.23□□□□□ -0.93
RAB40B-202ENST00000538809 ERASQ7Z444 233 aa9.23□□□□□ -0.93
RAB40B-202ENST00000538809 LINC01600Q96MT4 127 aa9.23□□□□□ -0.93
RAB40B-202ENST00000538809 PSORS1C2Q9UIG4 136 aa9.23□□□□□ -0.93
RAB40B-202ENST00000538809 TRBV30A0A0K0K1B3 111 aa9.22□□□□□ -0.93
RAB40B-202ENST00000538809 SRSF9Q13242 221 aaKnown RBP eCLIP9.22□□□□□ -0.93
RAB40B-202ENST00000538809 GAGE2EQ4V326 116 aa9.22□□□□□ -0.93
RAB40B-202ENST00000538809 PAPPA-AS1Q5QFB9 102 aa9.22□□□□□ -0.93
RAB40B-202ENST00000538809 FAM19A5Q7Z5A7 132 aaPredicted RBP9.22□□□□□ -0.93
RAB40B-202ENST00000538809 GAGE2DQ9UEU5 116 aa9.22□□□□□ -0.93
RAB40B-202ENST00000538809 HERVK_113P63121 156 aa9.21□□□□□ -0.94
RAB40B-202ENST00000538809 FABP9Q0Z7S8 132 aa9.21□□□□□ -0.94
RAB40B-202ENST00000538809 REG3GQ6UW15 175 aa9.21□□□□□ -0.94
RAB40B-202ENST00000538809 SCGB3A1Q96QR1 104 aa9.21□□□□□ -0.94
RAB40B-202ENST00000538809 CDKN2A-AS1Q9UH64 79 aa9.21□□□□□ -0.94
RAB40B-202ENST00000538809 LINC01549A6NIU2 74 aa9.2□□□□□ -0.94
RAB40B-202ENST00000538809 SEC11AP67812 179 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms