RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 UBE2D2P62837 147 aa12.28□□□□□ -0.44
SCARB1-205ENST00000538291 PRM2P04554 102 aa12.28□□□□□ -0.44
SCARB1-205ENST00000538291 MUC7Q8TAX7 377 aa12.28□□□□□ -0.44
SCARB1-205ENST00000538291 POLR2KP53803 58 aaKnown RBP12.28□□□□□ -0.44
SCARB1-205ENST00000538291 PCDH15Q96QU1 1955 aa12.28□□□□□ -0.44
SCARB1-205ENST00000538291 IGF2RP11717 2491 aa12.27□□□□□ -0.45
SCARB1-205ENST00000538291 PRRC2AP48634 2157 aaKnown RBP12.27□□□□□ -0.45
SCARB1-205ENST00000538291 IGLV9-49A0A0B4J1Y8 123 aa12.27□□□□□ -0.45
SCARB1-205ENST00000538291 ZNF73O43830 326 aaPredicted RBP12.26□□□□□ -0.45
SCARB1-205ENST00000538291 Q8IZM0 81 aa12.26□□□□□ -0.45
SCARB1-205ENST00000538291 KRTAP10-9P60411 292 aa12.26□□□□□ -0.45
SCARB1-205ENST00000538291 ODF3L2Q3SX64 289 aa12.25□□□□□ -0.45
SCARB1-205ENST00000538291 WFDC13Q8IUB5 93 aa12.25□□□□□ -0.45
SCARB1-205ENST00000538291 UQCRQO14949 82 aa12.24□□□□□ -0.45
SCARB1-205ENST00000538291 SPTSSBQ8NFR3 76 aa12.24□□□□□ -0.45
SCARB1-205ENST00000538291 TP73-AS1Q9UF72 201 aa12.24□□□□□ -0.45
SCARB1-205ENST00000538291 PLXNB1O43157 2135 aa12.24□□□□□ -0.45
SCARB1-205ENST00000538291 CYSRT1A8MQ03 144 aa12.24□□□□□ -0.45
SCARB1-205ENST00000538291 BRK1Q8WUW1 75 aa12.24□□□□□ -0.45
SCARB1-205ENST00000538291 CDC42SE2Q9NRR3 84 aa12.24□□□□□ -0.45
SCARB1-205ENST00000538291 CHCHD7Q9BUK0 85 aa12.23□□□□□ -0.45
SCARB1-205ENST00000538291 FAM236DA0A1B0GTK5 79 aa12.23□□□□□ -0.45
SCARB1-205ENST00000538291 FAM236CP0DP71 79 aa12.23□□□□□ -0.45
SCARB1-205ENST00000538291 NDUFV3P56181 108 aaKnown RBP12.23□□□□□ -0.45
SCARB1-205ENST00000538291 PRR15LQ9BU68 103 aa12.23□□□□□ -0.45
SCARB1-205ENST00000538291 IGLV1-51P01701 117 aa12.22□□□□□ -0.45
SCARB1-205ENST00000538291 SMIM11BQ8TCY0 68 aa12.22□□□□□ -0.45
SCARB1-205ENST00000538291 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.21□□□□□ -0.45
SCARB1-205ENST00000538291 RPL28P46779 137 aaKnown RBP12.21□□□□□ -0.45
SCARB1-205ENST00000538291 MT-ATP8P03928 68 aa12.21□□□□□ -0.45
SCARB1-205ENST00000538291 MYO9AB2RTY4 2548 aa12.21□□□□□ -0.45
SCARB1-205ENST00000538291 RETNQ9HD89 108 aa12.2□□□□□ -0.46
SCARB1-205ENST00000538291 FAM19A3Q7Z5A8 133 aa12.2□□□□□ -0.46
SCARB1-205ENST00000538291 Q8N9L7 120 aa12.2□□□□□ -0.46
SCARB1-205ENST00000538291 MPLKIPQ8TAP9 179 aa12.2□□□□□ -0.46
SCARB1-205ENST00000538291 EGFEM1PQ0D2K5 195 aa12.19□□□□□ -0.46
SCARB1-205ENST00000538291 KIAA1549LQ6ZVL6 1849 aa12.19□□□□□ -0.46
SCARB1-205ENST00000538291 M0QXV9 152 aa12.19□□□□□ -0.46
SCARB1-205ENST00000538291 KIAA1549Q9HCM3 1950 aa12.18□□□□□ -0.46
SCARB1-205ENST00000538291 LST1O00453 97 aa12.18□□□□□ -0.46
SCARB1-205ENST00000538291 MRPS12O15235 138 aaKnown RBP12.18□□□□□ -0.46
SCARB1-205ENST00000538291 C10orf25Q5T742 122 aa12.18□□□□□ -0.46
SCARB1-205ENST00000538291 PIEZO2Q9H5I5 2752 aa12.17□□□□□ -0.46
SCARB1-205ENST00000538291 SERP1Q9Y6X1 66 aa12.17□□□□□ -0.46
SCARB1-205ENST00000538291 CNFNQ9BYD5 112 aa12.16□□□□□ -0.46
SCARB1-205ENST00000538291 UNQ6190/PRO20217Q6UXQ8 127 aa12.16□□□□□ -0.46
SCARB1-205ENST00000538291 BRI3O95415 125 aa12.16□□□□□ -0.46
SCARB1-205ENST00000538291 CRIP2P52943 208 aaPredicted RBP12.15□□□□□ -0.46
SCARB1-205ENST00000538291 C16orf95Q9H693 158 aa12.15□□□□□ -0.46
SCARB1-205ENST00000538291 IGLV5-52A0A0A0MRZ9 124 aa12.15□□□□□ -0.46
SCARB1-205ENST00000538291 POM121L12Q8N7R1 296 aa12.15□□□□□ -0.46
SCARB1-205ENST00000538291 EDN2P20800 178 aa12.15□□□□□ -0.46
SCARB1-205ENST00000538291 LINC00242Q5T6M2 205 aa12.14□□□□□ -0.47
SCARB1-205ENST00000538291 MRPL55Q7Z7F7 128 aaKnown RBP12.14□□□□□ -0.47
SCARB1-205ENST00000538291 PCNX3Q9H6A9 2034 aa12.14□□□□□ -0.47
SCARB1-205ENST00000538291 GAS8-AS1O95177 125 aa12.14□□□□□ -0.47
SCARB1-205ENST00000538291 Q6ZTC4 211 aa12.14□□□□□ -0.47
SCARB1-205ENST00000538291 V9GYY9 64 aa12.14□□□□□ -0.47
SCARB1-205ENST00000538291 NDUFC1O43677 76 aa12.13□□□□□ -0.47
SCARB1-205ENST00000538291 C6orf223Q8N319 242 aa12.13□□□□□ -0.47
SCARB1-205ENST00000538291 NDUFC2-KCTD14E9PQ53 114 aa12.13□□□□□ -0.47
SCARB1-205ENST00000538291 IGIPA6NJ69 53 aa12.12□□□□□ -0.47
SCARB1-205ENST00000538291 JMJD1CQ15652 2540 aa12.11□□□□□ -0.47
SCARB1-205ENST00000538291 FAM240AA0A1B0GVK7 77 aa12.11□□□□□ -0.47
SCARB1-205ENST00000538291 ATP5EP56381 51 aaPredicted RBP12.11□□□□□ -0.47
SCARB1-205ENST00000538291 TANC2Q9HCD6 1990 aa12.11□□□□□ -0.47
SCARB1-205ENST00000538291 NUP210LQ5VU65 1888 aa12.11□□□□□ -0.47
SCARB1-205ENST00000538291 REG3GQ6UW15 175 aa12.11□□□□□ -0.47
SCARB1-205ENST00000538291 FSHBP01225 129 aa12.09□□□□□ -0.47
SCARB1-205ENST00000538291 SERP2Q8N6R1 65 aa12.09□□□□□ -0.47
SCARB1-205ENST00000538291 C10orf142B7Z368 130 aa12.09□□□□□ -0.47
SCARB1-205ENST00000538291 CIRBP-AS1Q8TBR5 109 aa12.09□□□□□ -0.47
SCARB1-205ENST00000538291 IMUPQ9GZP8 106 aa12.09□□□□□ -0.47
SCARB1-205ENST00000538291 ZNF580Q9UK33 172 aa12.09□□□□□ -0.47
SCARB1-205ENST00000538291 FHL2Q14192 279 aa12.09□□□□□ -0.47
SCARB1-205ENST00000538291 YPEL4Q96NS1 127 aa12.09□□□□□ -0.47
SCARB1-205ENST00000538291 MUC22E2RYF6 1773 aaPredicted RBP12.09□□□□□ -0.47
SCARB1-205ENST00000538291 NTM-AS1Q6ZSK4 140 aa12.08□□□□□ -0.48
SCARB1-205ENST00000538291 SMIM1B2RUZ4 78 aa12.08□□□□□ -0.48
SCARB1-205ENST00000538291 TRBV10-3A0A0K0K1G6 114 aa12.08□□□□□ -0.48
SCARB1-205ENST00000538291 C2orf91Q6ZV80 131 aa12.08□□□□□ -0.48
SCARB1-205ENST00000538291 SNURFQ9Y675 71 aa12.07□□□□□ -0.48
SCARB1-205ENST00000538291 C9orf116Q5BN46 136 aaPredicted RBP12.07□□□□□ -0.48
SCARB1-205ENST00000538291 A0A1W2PPR1 153 aa12.06□□□□□ -0.48
SCARB1-205ENST00000538291 C1orf134Q5TEV5 83 aa12.06□□□□□ -0.48
SCARB1-205ENST00000538291 IGLV4-60A0A075B6I1 120 aa12.06□□□□□ -0.48
SCARB1-205ENST00000538291 PRR4Q16378 134 aa12.06□□□□□ -0.48
SCARB1-205ENST00000538291 C1orf137Q5JT78 98 aa12.06□□□□□ -0.48
SCARB1-205ENST00000538291 Q6ZVQ6 151 aa12.06□□□□□ -0.48
SCARB1-205ENST00000538291 CEP192Q8TEP8 1941 aa12.06□□□□□ -0.48
SCARB1-205ENST00000538291 F8WDY8 70 aa12.04□□□□□ -0.48
SCARB1-205ENST00000538291 ARHGAP32A7KAX9 2087 aa12.04□□□□□ -0.48
SCARB1-205ENST00000538291 FAM30AQ9NZY2 134 aa12.03□□□□□ -0.48
SCARB1-205ENST00000538291 TLN1Q9Y490 2541 aaKnown RBP12.03□□□□□ -0.48
SCARB1-205ENST00000538291 LINC01556Q5JQF7 62 aa12.03□□□□□ -0.48
SCARB1-205ENST00000538291 ESRGQ1W209 222 aa12.02□□□□□ -0.48
SCARB1-205ENST00000538291 Q6JHZ5 121 aa12.02□□□□□ -0.48
SCARB1-205ENST00000538291 CSDC2Q9Y534 153 aaKnown RBP12.02□□□□□ -0.49
SCARB1-205ENST00000538291 LINC00694P0DN24 101 aa12.02□□□□□ -0.49
SCARB1-205ENST00000538291 Q8N814 137 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms