RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 EDN2P20800 178 aa8.23□□□□□ -1.09
SEMA4D-221ENST00000537934 RNASE13Q5GAN3 156 aaKnown RBP8.23□□□□□ -1.09
SEMA4D-221ENST00000537934 LINC00846Q9NV44 126 aa8.23□□□□□ -1.09
SEMA4D-221ENST00000537934 EPM2AB3EWF7 344 aa8.23□□□□□ -1.09
SEMA4D-221ENST00000537934 G3V318 75 aa8.23□□□□□ -1.09
SEMA4D-221ENST00000537934 IGHV4-59P01825 116 aa8.23□□□□□ -1.09
SEMA4D-221ENST00000537934 Q9HAA7 133 aa8.23□□□□□ -1.09
SEMA4D-221ENST00000537934 NACAE9PAV3 2078 aa8.22□□□□□ -1.09
SEMA4D-221ENST00000537934 FAM223BA6NKX1 122 aa8.22□□□□□ -1.09
SEMA4D-221ENST00000537934 UBE2D4Q9Y2X8 147 aa8.22□□□□□ -1.09
SEMA4D-221ENST00000537934 A6NDX4 124 aa8.22□□□□□ -1.09
SEMA4D-221ENST00000537934 FSHBP01225 129 aa8.22□□□□□ -1.09
SEMA4D-221ENST00000537934 PSMB8P28062 276 aa8.22□□□□□ -1.09
SEMA4D-221ENST00000537934 SOSTDC1Q6X4U4 206 aa8.22□□□□□ -1.09
SEMA4D-221ENST00000537934 LINC00336Q6ZUF6 198 aa8.22□□□□□ -1.09
SEMA4D-221ENST00000537934 OBSCN-AS1Q96MR7 158 aa8.22□□□□□ -1.09
SEMA4D-221ENST00000537934 BLCAPP62952 87 aa8.21□□□□□ -1.09
SEMA4D-221ENST00000537934 HIST2H2BDQ6DRA6 164 aa8.21□□□□□ -1.1
SEMA4D-221ENST00000537934 C14orf132Q9NPU4 83 aa8.21□□□□□ -1.1
SEMA4D-221ENST00000537934 UNQ9165/PRO28630Q6UXU0 137 aa8.2□□□□□ -1.1
SEMA4D-221ENST00000537934 OVOL2Q9BRP0 275 aa8.2□□□□□ -1.1
SEMA4D-221ENST00000537934 CDKN2A-AS1Q9UH64 79 aa8.2□□□□□ -1.1
SEMA4D-221ENST00000537934 PKIGQ9Y2B9 76 aa8.2□□□□□ -1.1
SEMA4D-221ENST00000537934 IGLV5-45A0A087WSX0 123 aa8.2□□□□□ -1.1
SEMA4D-221ENST00000537934 IGHG2P01859 326 aa8.2□□□□□ -1.1
SEMA4D-221ENST00000537934 RPL28P46779 137 aaKnown RBP8.2□□□□□ -1.1
SEMA4D-221ENST00000537934 Q9H8V8 135 aa8.2□□□□□ -1.1
SEMA4D-221ENST00000537934 TRAV12-2A0A075B6T6 113 aa8.19□□□□□ -1.1
SEMA4D-221ENST00000537934 TMEM243Q9BU79 118 aa8.19□□□□□ -1.1
SEMA4D-221ENST00000537934 SERP1Q9Y6X1 66 aa8.19□□□□□ -1.1
SEMA4D-221ENST00000537934 FAM236DA0A1B0GTK5 79 aa8.19□□□□□ -1.1
SEMA4D-221ENST00000537934 NDUFA4O00483 81 aa8.19□□□□□ -1.1
SEMA4D-221ENST00000537934 FAM236CP0DP71 79 aa8.19□□□□□ -1.1
SEMA4D-221ENST00000537934 KRTAP1-1Q07627 177 aa8.19□□□□□ -1.1
SEMA4D-221ENST00000537934 C9orf129Q5T035 196 aaKnown RBP8.19□□□□□ -1.1
SEMA4D-221ENST00000537934 C1orf43Q9BWL3 253 aa8.19□□□□□ -1.1
SEMA4D-221ENST00000537934 PF4P02776 101 aa8.18□□□□□ -1.1
SEMA4D-221ENST00000537934 FAM223AQ8IWN6 122 aa8.18□□□□□ -1.1
SEMA4D-221ENST00000537934 A0A0U1RRA0 63 aa8.18□□□□□ -1.1
SEMA4D-221ENST00000537934 IGLV5-39A0A0G2JS06 123 aa8.17□□□□□ -1.1
SEMA4D-221ENST00000537934 GHRHP01286 108 aa8.17□□□□□ -1.1
SEMA4D-221ENST00000537934 TRBV12-3P01733 135 aa8.17□□□□□ -1.1
SEMA4D-221ENST00000537934 RBMY1BA6NDE4 496 aaKnown RBP8.17□□□□□ -1.1
SEMA4D-221ENST00000537934 RBMY1EA6NEQ0 496 aaKnown RBP8.17□□□□□ -1.1
SEMA4D-221ENST00000537934 RBMY1DP0C7P1 496 aaKnown RBP8.17□□□□□ -1.1
SEMA4D-221ENST00000537934 RBMY1A1P0DJD3 496 aaKnown RBP8.17□□□□□ -1.1
SEMA4D-221ENST00000537934 RBMY1CP0DJD4 496 aa8.17□□□□□ -1.1
SEMA4D-221ENST00000537934 RPL35AP18077 110 aaKnown RBP8.17□□□□□ -1.1
SEMA4D-221ENST00000537934 HOXD3P31249 432 aaPredicted RBP8.17□□□□□ -1.1
SEMA4D-221ENST00000537934 RBMY1FQ15415 496 aaKnown RBP8.17□□□□□ -1.1
SEMA4D-221ENST00000537934 ZNF625Q96I27 306 aaPredicted RBP8.17□□□□□ -1.1
SEMA4D-221ENST00000537934 CHCHD7Q9BUK0 85 aa8.17□□□□□ -1.1
SEMA4D-221ENST00000537934 IGKV3-7A0A075B6H7 116 aa8.16□□□□□ -1.1
SEMA4D-221ENST00000537934 TRAV13-2A0A0B4J235 113 aa8.16□□□□□ -1.1
SEMA4D-221ENST00000537934 Q6YL49 198 aa8.16□□□□□ -1.1
SEMA4D-221ENST00000537934 C19orf54Q5BKX5 351 aa8.16□□□□□ -1.1
SEMA4D-221ENST00000537934 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.16□□□□□ -1.1
SEMA4D-221ENST00000537934 SMR3AQ99954 134 aa8.16□□□□□ -1.1
SEMA4D-221ENST00000537934 ANK3Q12955 4377 aaKnown RBP8.15□□□□□ -1.1
SEMA4D-221ENST00000537934 XCL1P47992 114 aa8.15□□□□□ -1.1
SEMA4D-221ENST00000537934 XCL2Q9UBD3 114 aa8.15□□□□□ -1.1
SEMA4D-221ENST00000537934 HIVEP2P31629 2446 aa8.15□□□□□ -1.11
SEMA4D-221ENST00000537934 HIVEP1P15822 2718 aa8.15□□□□□ -1.11
SEMA4D-221ENST00000537934 IGHV1OR15-1A0A075B7D0 117 aa8.15□□□□□ -1.11
SEMA4D-221ENST00000537934 S100A7L2Q5SY68 101 aa8.15□□□□□ -1.11
SEMA4D-221ENST00000537934 ATP5EP2Q5VTU8 51 aa8.15□□□□□ -1.11
SEMA4D-221ENST00000537934 TMEM86BQ8N661 226 aa8.15□□□□□ -1.11
SEMA4D-221ENST00000537934 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.14□□□□□ -1.11
SEMA4D-221ENST00000537934 A0A087WYN8 130 aa8.14□□□□□ -1.11
SEMA4D-221ENST00000537934 IGKV2-29A2NJV5 120 aaPredicted RBP8.14□□□□□ -1.11
SEMA4D-221ENST00000537934 HILS1P60008 231 aa8.14□□□□□ -1.11
SEMA4D-221ENST00000537934 C20orf197Q8N268 126 aa8.14□□□□□ -1.11
SEMA4D-221ENST00000537934 RHPN1-AS1Q9BWJ2 59 aa8.14□□□□□ -1.11
SEMA4D-221ENST00000537934 COX6A2Q02221 97 aa8.14□□□□□ -1.11
SEMA4D-221ENST00000537934 SETXQ7Z333 2677 aaKnown RBP8.13□□□□□ -1.11
SEMA4D-221ENST00000537934 C16orf95Q9H693 158 aa8.13□□□□□ -1.11
SEMA4D-221ENST00000537934 H0YGX0 51 aa8.13□□□□□ -1.11
SEMA4D-221ENST00000537934 CRPP02741 224 aa8.13□□□□□ -1.11
SEMA4D-221ENST00000537934 LINC00467Q9BRT7 94 aa8.13□□□□□ -1.11
SEMA4D-221ENST00000537934 NIPBLQ6KC79 2804 aaeCLIP8.12□□□□□ -1.11
SEMA4D-221ENST00000537934 TRAV23DV6A0A075B6W5 121 aa8.12□□□□□ -1.11
SEMA4D-221ENST00000537934 CCKP06307 115 aa8.12□□□□□ -1.11
SEMA4D-221ENST00000537934 PIK3CD-AS1Q5SR53 167 aa8.12□□□□□ -1.11
SEMA4D-221ENST00000537934 C10orf99Q6UWK7 81 aa8.12□□□□□ -1.11
SEMA4D-221ENST00000537934 H7BZZ5 65 aa8.12□□□□□ -1.11
SEMA4D-221ENST00000537934 NCR3O14931 201 aa8.12□□□□□ -1.11
SEMA4D-221ENST00000537934 SMIM26A0A096LP01 95 aa8.11□□□□□ -1.11
SEMA4D-221ENST00000537934 PROK1P58294 105 aa8.11□□□□□ -1.11
SEMA4D-221ENST00000537934 NSD1Q96L73 2696 aaPredicted RBP8.11□□□□□ -1.11
SEMA4D-221ENST00000537934 IGHV3-73A0A0B4J1V6 119 aa8.11□□□□□ -1.11
SEMA4D-221ENST00000537934 SMIM1B2RUZ4 78 aa8.11□□□□□ -1.11
SEMA4D-221ENST00000537934 IGHV3-11P01762 117 aa8.1□□□□□ -1.11
SEMA4D-221ENST00000537934 LINC00242Q5T6M2 205 aa8.1□□□□□ -1.11
SEMA4D-221ENST00000537934 LYPD5Q6UWN5 251 aa8.1□□□□□ -1.11
SEMA4D-221ENST00000537934 LINC00337Q8N6G1 96 aa8.1□□□□□ -1.11
SEMA4D-221ENST00000537934 TRBV10-3A0A0K0K1G6 114 aa8.1□□□□□ -1.11
SEMA4D-221ENST00000537934 KNCNA6PVL3 124 aa8.1□□□□□ -1.11
SEMA4D-221ENST00000537934 BCE1O60756 84 aa8.1□□□□□ -1.11
SEMA4D-221ENST00000537934 CFHR3Q02985 330 aa8.1□□□□□ -1.11
SEMA4D-221ENST00000537934 SMIM11BQ8TCY0 68 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms