RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 TMEM141Q96I45 108 aa11.05□□□□□ -0.64
GPN3-202ENST00000537466 ZNF561-AS1K7EIQ3 104 aa11.04□□□□□ -0.64
GPN3-202ENST00000537466 SNAPINO95295 136 aa11.04□□□□□ -0.64
GPN3-202ENST00000537466 MT-ND6P03923 174 aa11.04□□□□□ -0.64
GPN3-202ENST00000537466 ZC2HC1BQ5TFG8 222 aa11.04□□□□□ -0.64
GPN3-202ENST00000537466 PRSS3P2Q8NHM4 247 aa11.04□□□□□ -0.64
GPN3-202ENST00000537466 IGLV4-69A0A075B6H9 119 aa11.03□□□□□ -0.64
GPN3-202ENST00000537466 IGHV3OR16-9A0A0B4J2B5 98 aa11.03□□□□□ -0.64
GPN3-202ENST00000537466 FABP9Q0Z7S8 132 aa11.03□□□□□ -0.64
GPN3-202ENST00000537466 IGIPA6NJ69 53 aa11.02□□□□□ -0.65
GPN3-202ENST00000537466 LINC00173Q6ZV60 143 aa11.02□□□□□ -0.65
GPN3-202ENST00000537466 SPACA4Q8TDM5 124 aa11.02□□□□□ -0.65
GPN3-202ENST00000537466 CARD19Q96LW7 228 aa11.02□□□□□ -0.65
GPN3-202ENST00000537466 PLA2G1BP04054 148 aaKnown RBP11.01□□□□□ -0.65
GPN3-202ENST00000537466 SYCNQ0VAF6 134 aa11.01□□□□□ -0.65
GPN3-202ENST00000537466 LINC00242Q5T6M2 205 aa11.01□□□□□ -0.65
GPN3-202ENST00000537466 TEX43Q6ZNM6 134 aa11.01□□□□□ -0.65
GPN3-202ENST00000537466 AMELXQ99217 191 aa11□□□□□ -0.65
GPN3-202ENST00000537466 IGKV2-24A0A0C4DH68 120 aa11□□□□□ -0.65
GPN3-202ENST00000537466 APOMO95445 188 aa11□□□□□ -0.65
GPN3-202ENST00000537466 UBE2D1P51668 147 aa11□□□□□ -0.65
GPN3-202ENST00000537466 KRTAP10-4P60372 401 aaPredicted RBP11□□□□□ -0.65
GPN3-202ENST00000537466 LCE2DQ5TA82 110 aaPredicted RBP11□□□□□ -0.65
GPN3-202ENST00000537466 Q6ZRU5 148 aa11□□□□□ -0.65
GPN3-202ENST00000537466 TOMM6Q96B49 74 aa11□□□□□ -0.65
GPN3-202ENST00000537466 A0A087WYN8 130 aa10.99□□□□□ -0.65
GPN3-202ENST00000537466 A0A096LNI7 61 aa10.99□□□□□ -0.65
GPN3-202ENST00000537466 LINC01546A6NGU7 62 aa10.99□□□□□ -0.65
GPN3-202ENST00000537466 SPAG11BQ08648 103 aa10.99□□□□□ -0.65
GPN3-202ENST00000537466 Q6ZN92 141 aa10.99□□□□□ -0.65
GPN3-202ENST00000537466 DPH3Q96FX2 82 aa10.99□□□□□ -0.65
GPN3-202ENST00000537466 VCX2Q9H322 139 aa10.99□□□□□ -0.65
GPN3-202ENST00000537466 TRAPPC1Q9Y5R8 145 aa10.99□□□□□ -0.65
GPN3-202ENST00000537466 NPSP0C0P6 89 aa10.98□□□□□ -0.65
GPN3-202ENST00000537466 OR10D4PQ8NGN7 298 aa10.98□□□□□ -0.65
GPN3-202ENST00000537466 ORAOV1Q8WV07 137 aa10.98□□□□□ -0.65
GPN3-202ENST00000537466 CAMK2N2Q96S95 79 aa10.98□□□□□ -0.65
GPN3-202ENST00000537466 C2orf88Q9BSF0 95 aa10.98□□□□□ -0.65
GPN3-202ENST00000537466 G0S2P27469 103 aa10.97□□□□□ -0.65
GPN3-202ENST00000537466 MAJINQ3KP22 176 aa10.97□□□□□ -0.65
GPN3-202ENST00000537466 C2orf48Q96LS8 159 aa10.97□□□□□ -0.65
GPN3-202ENST00000537466 YPEL4Q96NS1 127 aa10.97□□□□□ -0.65
GPN3-202ENST00000537466 TIMM17AQ99595 171 aa10.97□□□□□ -0.65
GPN3-202ENST00000537466 FLG2Q5D862 2391 aaPredicted RBP10.96□□□□□ -0.65
GPN3-202ENST00000537466 A0A087WZ39 114 aa10.96□□□□□ -0.65
GPN3-202ENST00000537466 SLC7A5P1Q8MH63 180 aa10.96□□□□□ -0.65
GPN3-202ENST00000537466 FA2HQ7L5A8 372 aa10.95□□□□□ -0.66
GPN3-202ENST00000537466 ERASQ7Z444 233 aa10.95□□□□□ -0.66
GPN3-202ENST00000537466 PLAC8Q9NZF1 115 aa10.95□□□□□ -0.66
GPN3-202ENST00000537466 C18orf32Q8TCD1 76 aa10.94□□□□□ -0.66
GPN3-202ENST00000537466 SCGB3A1Q96QR1 104 aa10.94□□□□□ -0.66
GPN3-202ENST00000537466 MYCBP2O75592 4640 aa10.94□□□□□ -0.66
GPN3-202ENST00000537466 RPL37AP61513 92 aaKnown RBP10.93□□□□□ -0.66
GPN3-202ENST00000537466 FAM19A3Q7Z5A8 133 aa10.93□□□□□ -0.66
GPN3-202ENST00000537466 URB1-AS1Q96HZ7 61 aa10.93□□□□□ -0.66
GPN3-202ENST00000537466 SMCO4Q9NRQ5 59 aa10.93□□□□□ -0.66
GPN3-202ENST00000537466 A0A0J9YXV3 536 aa10.93□□□□□ -0.66
GPN3-202ENST00000537466 PAPPA-AS1Q5QFB9 102 aa10.93□□□□□ -0.66
GPN3-202ENST00000537466 STPG4Q8N801 248 aa10.93□□□□□ -0.66
GPN3-202ENST00000537466 LOC107984640A0A0U1RRK4 108 aa10.92□□□□□ -0.66
GPN3-202ENST00000537466 KIAA0087Q14695 138 aa10.92□□□□□ -0.66
GPN3-202ENST00000537466 C10orf25Q5T742 122 aa10.92□□□□□ -0.66
GPN3-202ENST00000537466 CBLN2Q8IUK8 224 aa10.92□□□□□ -0.66
GPN3-202ENST00000537466 PKIGQ9Y2B9 76 aa10.92□□□□□ -0.66
GPN3-202ENST00000537466 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.91□□□□□ -0.66
GPN3-202ENST00000537466 PTTG1IPP53801 180 aa10.91□□□□□ -0.66
GPN3-202ENST00000537466 GAGE2BQ13066 116 aa10.91□□□□□ -0.66
GPN3-202ENST00000537466 PKHD1L1Q86WI1 4243 aa10.9□□□□□ -0.66
GPN3-202ENST00000537466 A0A096LNJ9 63 aa10.9□□□□□ -0.66
GPN3-202ENST00000537466 UNQ6190/PRO20217Q6UXQ8 127 aa10.9□□□□□ -0.66
GPN3-202ENST00000537466 MRPL35Q9NZE8 188 aaKnown RBP10.9□□□□□ -0.66
GPN3-202ENST00000537466 LINC00474Q9P2X8 69 aa10.9□□□□□ -0.66
GPN3-202ENST00000537466 LINC01549A6NIU2 74 aa10.89□□□□□ -0.67
GPN3-202ENST00000537466 NDUFA1O15239 70 aa10.89□□□□□ -0.67
GPN3-202ENST00000537466 RNF151Q2KHN1 245 aa10.89□□□□□ -0.67
GPN3-202ENST00000537466 LINC01561Q8N1V8 128 aa10.89□□□□□ -0.67
GPN3-202ENST00000537466 F8WDY8 70 aa10.88□□□□□ -0.67
GPN3-202ENST00000537466 LINC00614P0C842 121 aa10.88□□□□□ -0.67
GPN3-202ENST00000537466 HERVK_113P63121 156 aa10.88□□□□□ -0.67
GPN3-202ENST00000537466 CDKN2A-AS1Q9UH64 79 aa10.88□□□□□ -0.67
GPN3-202ENST00000537466 HNRNPA3P51991 378 aaKnown RBP10.87□□□□□ -0.67
GPN3-202ENST00000537466 SEC11AP67812 179 aa10.87□□□□□ -0.67
GPN3-202ENST00000537466 RPL18AQ02543 176 aaKnown RBP10.87□□□□□ -0.67
GPN3-202ENST00000537466 PMCHL1Q16048 86 aa10.87□□□□□ -0.67
GPN3-202ENST00000537466 C2orf82Q6UX34 121 aa10.87□□□□□ -0.67
GPN3-202ENST00000537466 C6orf48Q9UBA6 75 aa10.87□□□□□ -0.67
GPN3-202ENST00000537466 CST9LQ9H4G1 147 aa10.87□□□□□ -0.67
GPN3-202ENST00000537466 GEMIN7Q9H840 131 aaKnown RBP10.87□□□□□ -0.67
GPN3-202ENST00000537466 PMVKQ15126 192 aa10.85□□□□□ -0.67
GPN3-202ENST00000537466 TOMM7Q9P0U1 55 aa10.85□□□□□ -0.67
GPN3-202ENST00000537466 TINCRA0A1B0GVN0 87 aa10.84□□□□□ -0.67
GPN3-202ENST00000537466 A0A1W2PNN7 141 aa10.84□□□□□ -0.67
GPN3-202ENST00000537466 HBDP02042 147 aa10.84□□□□□ -0.67
GPN3-202ENST00000537466 C7orf33Q8WU49 177 aa10.84□□□□□ -0.67
GPN3-202ENST00000537466 Q6ZRP5 223 aa10.83□□□□□ -0.68
GPN3-202ENST00000537466 LINC00469Q8N7U9 141 aa10.83□□□□□ -0.68
GPN3-202ENST00000537466 PRSS2P07478 247 aa10.82□□□□□ -0.68
GPN3-202ENST00000537466 TLX1NBP0CAT3 122 aa10.82□□□□□ -0.68
GPN3-202ENST00000537466 RAB5BP61020 215 aa10.82□□□□□ -0.68
GPN3-202ENST00000537466 PDZD11Q5EBL8 140 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms