RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 LINC00173Q6ZV60 143 aa10.6□□□□□ -0.71
ATL3-202ENST00000535789 MRPL52Q86TS9 123 aaKnown RBP10.6□□□□□ -0.71
ATL3-202ENST00000535789 TMEM18Q96B42 140 aa10.6□□□□□ -0.71
ATL3-202ENST00000535789 IGIPA6NJ69 53 aa10.59□□□□□ -0.71
ATL3-202ENST00000535789 FGF6P10767 208 aa10.59□□□□□ -0.71
ATL3-202ENST00000535789 C14orf177Q52M58 125 aa10.59□□□□□ -0.71
ATL3-202ENST00000535789 FAM104AQ969W3 186 aa10.59□□□□□ -0.71
ATL3-202ENST00000535789 TIMM17AQ99595 171 aa10.59□□□□□ -0.71
ATL3-202ENST00000535789 TIMM21Q9BVV7 248 aa10.59□□□□□ -0.71
ATL3-202ENST00000535789 PYGO1Q9Y3Y4 419 aa10.59□□□□□ -0.71
ATL3-202ENST00000535789 TRAV8-4A0A0B4J246 113 aa10.58□□□□□ -0.72
ATL3-202ENST00000535789 LEPROTL1O95214 131 aa10.58□□□□□ -0.72
ATL3-202ENST00000535789 S100A2P29034 98 aa10.58□□□□□ -0.72
ATL3-202ENST00000535789 ERASQ7Z444 233 aa10.58□□□□□ -0.72
ATL3-202ENST00000535789 SCGB3A1Q96QR1 104 aa10.58□□□□□ -0.72
ATL3-202ENST00000535789 SPANXA1Q9NS26 97 aa10.58□□□□□ -0.72
ATL3-202ENST00000535789 IGKV3OR2-268A0A0C4DH90 116 aa10.57□□□□□ -0.72
ATL3-202ENST00000535789 SLPIP03973 132 aa10.57□□□□□ -0.72
ATL3-202ENST00000535789 FABP4P15090 132 aa10.57□□□□□ -0.72
ATL3-202ENST00000535789 C15orf56Q8N910 161 aa10.57□□□□□ -0.72
ATL3-202ENST00000535789 CSDC2Q9Y534 153 aaKnown RBP10.57□□□□□ -0.72
ATL3-202ENST00000535789 IGLV4-3A0A075B6K6 122 aa10.56□□□□□ -0.72
ATL3-202ENST00000535789 PANO1I0J062 215 aa10.56□□□□□ -0.72
ATL3-202ENST00000535789 NPSP0C0P6 89 aa10.56□□□□□ -0.72
ATL3-202ENST00000535789 ZNF25P17030 456 aaPredicted RBP10.56□□□□□ -0.72
ATL3-202ENST00000535789 CIRBP-AS1Q8TBR5 109 aa10.56□□□□□ -0.72
ATL3-202ENST00000535789 TMEM141Q96I45 108 aa10.56□□□□□ -0.72
ATL3-202ENST00000535789 OPRPNQ99935 248 aaPredicted RBP10.56□□□□□ -0.72
ATL3-202ENST00000535789 HSPB8Q9UJY1 196 aa10.56□□□□□ -0.72
ATL3-202ENST00000535789 GAGE12HA6NDE8 117 aa10.55□□□□□ -0.72
ATL3-202ENST00000535789 ATP5LO75964 103 aa10.55□□□□□ -0.72
ATL3-202ENST00000535789 INAFM2P0DMQ5 153 aa10.55□□□□□ -0.72
ATL3-202ENST00000535789 KRTAP10-4P60372 401 aaPredicted RBP10.55□□□□□ -0.72
ATL3-202ENST00000535789 MRPS36P82909 103 aaKnown RBP10.55□□□□□ -0.72
ATL3-202ENST00000535789 SMAGPQ0VAQ4 97 aa10.55□□□□□ -0.72
ATL3-202ENST00000535789 AMMECR1LQ6DCA0 310 aa10.55□□□□□ -0.72
ATL3-202ENST00000535789 Q6ZUT4 128 aa10.55□□□□□ -0.72
ATL3-202ENST00000535789 LINC00528Q8N1L1 170 aa10.55□□□□□ -0.72
ATL3-202ENST00000535789 C9orf163Q8N9P6 203 aa10.55□□□□□ -0.72
ATL3-202ENST00000535789 IFI27L1Q96BM0 104 aa10.55□□□□□ -0.72
ATL3-202ENST00000535789 CHAC1Q9BUX1 264 aa10.55□□□□□ -0.72
ATL3-202ENST00000535789 LRP1Q07954 4544 aaKnown RBP10.54□□□□□ -0.72
ATL3-202ENST00000535789 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.54□□□□□ -0.72
ATL3-202ENST00000535789 CHCHD10Q8WYQ3 142 aaPredicted RBP10.54□□□□□ -0.72
ATL3-202ENST00000535789 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.54□□□□□ -0.72
ATL3-202ENST00000535789 FAT3Q8TDW7 4589 aa10.53□□□□□ -0.72
ATL3-202ENST00000535789 CNBPP62633 177 aaKnown RBP10.53□□□□□ -0.72
ATL3-202ENST00000535789 OR5A1Q8NGJ0 315 aa10.53□□□□□ -0.72
ATL3-202ENST00000535789 CDC42SE2Q9NRR3 84 aa10.53□□□□□ -0.72
ATL3-202ENST00000535789 hDV102S1A0JD36 115 aa10.52□□□□□ -0.73
ATL3-202ENST00000535789 RNASE13Q5GAN3 156 aaKnown RBP10.52□□□□□ -0.73
ATL3-202ENST00000535789 DGAT2L7PQ6IED9 249 aa10.52□□□□□ -0.73
ATL3-202ENST00000535789 ZNF664Q8N3J9 261 aa10.52□□□□□ -0.73
ATL3-202ENST00000535789 TMEM101Q96IK0 257 aa10.52□□□□□ -0.73
ATL3-202ENST00000535789 AMELXQ99217 191 aa10.52□□□□□ -0.73
ATL3-202ENST00000535789 FAM229AH3BQW9 127 aa10.51□□□□□ -0.73
ATL3-202ENST00000535789 C3orf79P0CE67 100 aa10.51□□□□□ -0.73
ATL3-202ENST00000535789 FOXI1Q12951 378 aa10.51□□□□□ -0.73
ATL3-202ENST00000535789 ZC2HC1BQ5TFG8 222 aa10.51□□□□□ -0.73
ATL3-202ENST00000535789 Q6ZN92 141 aa10.51□□□□□ -0.73
ATL3-202ENST00000535789 DMBT1Q9UGM3 2413 aaPredicted RBP10.5□□□□□ -0.73
ATL3-202ENST00000535789 SDIM1Q6ZPB5 146 aa10.5□□□□□ -0.73
ATL3-202ENST00000535789 OR10D4PQ8NGN7 298 aa10.5□□□□□ -0.73
ATL3-202ENST00000535789 MAP1LC3CQ9BXW4 147 aa10.5□□□□□ -0.73
ATL3-202ENST00000535789 TRAV12-1A0A0B4J245 112 aa10.49□□□□□ -0.73
ATL3-202ENST00000535789 LINC00959A0A1B0GUT2 108 aa10.49□□□□□ -0.73
ATL3-202ENST00000535789 LOC105371267A0A1B0GV96 52 aa10.49□□□□□ -0.73
ATL3-202ENST00000535789 SYS1-DBNDD2H3BUS1 97 aa10.49□□□□□ -0.73
ATL3-202ENST00000535789 HIGD2BQ4VC39 106 aa10.49□□□□□ -0.73
ATL3-202ENST00000535789 PAPPA-AS1Q5QFB9 102 aa10.49□□□□□ -0.73
ATL3-202ENST00000535789 KRTDAPP60985 99 aa10.48□□□□□ -0.73
ATL3-202ENST00000535789 PMVKQ15126 192 aa10.48□□□□□ -0.73
ATL3-202ENST00000535789 TEX43Q6ZNM6 134 aa10.48□□□□□ -0.73
ATL3-202ENST00000535789 VCX2Q9H322 139 aa10.48□□□□□ -0.73
ATL3-202ENST00000535789 CST9LQ9H4G1 147 aa10.48□□□□□ -0.73
ATL3-202ENST00000535789 GVQW2A0A096LPI5 108 aaPredicted RBP10.47□□□□□ -0.73
ATL3-202ENST00000535789 H0Y8G0 127 aa10.47□□□□□ -0.73
ATL3-202ENST00000535789 CCL25O15444 150 aa10.47□□□□□ -0.73
ATL3-202ENST00000535789 XCL1P47992 114 aa10.47□□□□□ -0.73
ATL3-202ENST00000535789 CIRBPQ14011 172 aaKnown RBP10.47□□□□□ -0.73
ATL3-202ENST00000535789 ODF1Q14990 250 aa10.47□□□□□ -0.73
ATL3-202ENST00000535789 CHTF8P0CG12 524 aa10.46□□□□□ -0.73
ATL3-202ENST00000535789 PET117Q6UWS5 81 aa10.46□□□□□ -0.73
ATL3-202ENST00000535789 UBE2D1P51668 147 aa10.45□□□□□ -0.74
ATL3-202ENST00000535789 LINC01545Q5VT33 79 aa10.45□□□□□ -0.74
ATL3-202ENST00000535789 IGLV4-69A0A075B6H9 119 aa10.44□□□□□ -0.74
ATL3-202ENST00000535789 FAM19A3Q7Z5A8 133 aa10.44□□□□□ -0.74
ATL3-202ENST00000535789 LINC00526Q96FQ7 95 aa10.44□□□□□ -0.74
ATL3-202ENST00000535789 C2orf88Q9BSF0 95 aa10.44□□□□□ -0.74
ATL3-202ENST00000535789 MRPL35Q9NZE8 188 aaKnown RBP10.44□□□□□ -0.74
ATL3-202ENST00000535789 CHTOPQ9Y3Y2 248 aaKnown RBP10.44□□□□□ -0.74
ATL3-202ENST00000535789 PLA2G1BP04054 148 aaKnown RBP10.43□□□□□ -0.74
ATL3-202ENST00000535789 IGHV3-64A0A075B6Q5 118 aa10.42□□□□□ -0.74
ATL3-202ENST00000535789 TRAV13-1A0A0B4J241 112 aa10.42□□□□□ -0.74
ATL3-202ENST00000535789 F8VRH5 84 aa10.42□□□□□ -0.74
ATL3-202ENST00000535789 IGLC3P0DOY3 106 aa10.42□□□□□ -0.74
ATL3-202ENST00000535789 SPACA4Q8TDM5 124 aa10.42□□□□□ -0.74
ATL3-202ENST00000535789 PMCHL2Q9BQD1 86 aa10.42□□□□□ -0.74
ATL3-202ENST00000535789 A0A0J9YXV3 536 aa10.41□□□□□ -0.74
ATL3-202ENST00000535789 AKR1D1P51857 326 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms