RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 HIST1H2BJP06899 126 aa8.55□□□□□ -1.04
TMEM258-202ENST00000535042 HIST1H2BOP23527 126 aa8.55□□□□□ -1.04
TMEM258-202ENST00000535042 HIST1H2BBP33778 126 aa8.55□□□□□ -1.04
TMEM258-202ENST00000535042 HIST1H2BDP58876 126 aa8.55□□□□□ -1.04
TMEM258-202ENST00000535042 HIST1H2BCP62807 126 aa8.55□□□□□ -1.04
TMEM258-202ENST00000535042 HIST2H2BEQ16778 126 aa8.55□□□□□ -1.04
TMEM258-202ENST00000535042 HIGD2BQ4VC39 106 aa8.55□□□□□ -1.04
TMEM258-202ENST00000535042 PAPPA-AS1Q5QFB9 102 aa8.55□□□□□ -1.04
TMEM258-202ENST00000535042 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.55□□□□□ -1.04
TMEM258-202ENST00000535042 FAM19A2Q8N3H0 131 aa8.55□□□□□ -1.04
TMEM258-202ENST00000535042 HIST1H2BHQ93079 126 aa8.55□□□□□ -1.04
TMEM258-202ENST00000535042 HIST1H2BNQ99877 126 aa8.55□□□□□ -1.04
TMEM258-202ENST00000535042 HIST1H2BMQ99879 126 aa8.55□□□□□ -1.04
TMEM258-202ENST00000535042 C2orf88Q9BSF0 95 aa8.55□□□□□ -1.04
TMEM258-202ENST00000535042 DYNC1H1Q14204 4646 aaKnown RBP8.54□□□□□ -1.04
TMEM258-202ENST00000535042 BIRC6Q9NR09 4857 aa8.54□□□□□ -1.04
TMEM258-202ENST00000535042 hDV102S1A0JD36 115 aa8.54□□□□□ -1.04
TMEM258-202ENST00000535042 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.54□□□□□ -1.04
TMEM258-202ENST00000535042 COX7A2LO14548 114 aa8.54□□□□□ -1.04
TMEM258-202ENST00000535042 HSBP1O75506 76 aa8.54□□□□□ -1.04
TMEM258-202ENST00000535042 KRTAP10-1P60331 282 aa8.54□□□□□ -1.04
TMEM258-202ENST00000535042 LINC01620Q4KN68 170 aa8.54□□□□□ -1.04
TMEM258-202ENST00000535042 CFAP161Q6P656 301 aa8.54□□□□□ -1.04
TMEM258-202ENST00000535042 FAM19A3Q7Z5A8 133 aa8.54□□□□□ -1.04
TMEM258-202ENST00000535042 CST9LQ9H4G1 147 aa8.54□□□□□ -1.04
TMEM258-202ENST00000535042 GVQW2A0A096LPI5 108 aaPredicted RBP8.53□□□□□ -1.04
TMEM258-202ENST00000535042 IGHV1-58A0A0C4DH39 117 aa8.53□□□□□ -1.04
TMEM258-202ENST00000535042 A0A0J9YXV3 536 aa8.53□□□□□ -1.04
TMEM258-202ENST00000535042 PMVKQ15126 192 aa8.53□□□□□ -1.04
TMEM258-202ENST00000535042 LINC00526Q96FQ7 95 aa8.53□□□□□ -1.04
TMEM258-202ENST00000535042 ATP5LO75964 103 aa8.52□□□□□ -1.05
TMEM258-202ENST00000535042 MALP21145 153 aa8.52□□□□□ -1.05
TMEM258-202ENST00000535042 GCSHP23434 173 aa8.52□□□□□ -1.05
TMEM258-202ENST00000535042 DNAH5Q8TE73 4624 aa8.51□□□□□ -1.05
TMEM258-202ENST00000535042 PKHD1P08F94 4074 aa8.5□□□□□ -1.05
TMEM258-202ENST00000535042 A0A087WZ39 114 aa8.5□□□□□ -1.05
TMEM258-202ENST00000535042 NDUFA6P56556 154 aa8.5□□□□□ -1.05
TMEM258-202ENST00000535042 CNBPP62633 177 aaKnown RBP8.5□□□□□ -1.05
TMEM258-202ENST00000535042 IGHV3-64A0A075B6Q5 118 aa8.49□□□□□ -1.05
TMEM258-202ENST00000535042 HERVK_113P63121 156 aa8.49□□□□□ -1.05
TMEM258-202ENST00000535042 IFI27L1Q96BM0 104 aa8.49□□□□□ -1.05
TMEM258-202ENST00000535042 CDKN2A-AS1Q9UH64 79 aa8.49□□□□□ -1.05
TMEM258-202ENST00000535042 IGLV4-69A0A075B6H9 119 aa8.48□□□□□ -1.05
TMEM258-202ENST00000535042 TINCRA0A1B0GVN0 87 aa8.48□□□□□ -1.05
TMEM258-202ENST00000535042 APOMO95445 188 aa8.48□□□□□ -1.05
TMEM258-202ENST00000535042 SEC11AP67812 179 aa8.48□□□□□ -1.05
TMEM258-202ENST00000535042 C9orf163Q8N9P6 203 aa8.48□□□□□ -1.05
TMEM258-202ENST00000535042 ORAOV1Q8WV07 137 aa8.48□□□□□ -1.05
TMEM258-202ENST00000535042 GEMIN7Q9H840 131 aaKnown RBP8.48□□□□□ -1.05
TMEM258-202ENST00000535042 FAM30AQ9NZY2 134 aa8.48□□□□□ -1.05
TMEM258-202ENST00000535042 LRP1BQ9NZR2 4599 aa8.47□□□□□ -1.05
TMEM258-202ENST00000535042 IGLV5-45A0A087WSX0 123 aa8.47□□□□□ -1.05
TMEM258-202ENST00000535042 ZNF561-AS1K7EIQ3 104 aa8.47□□□□□ -1.05
TMEM258-202ENST00000535042 LEPROTL1O95214 131 aa8.47□□□□□ -1.05
TMEM258-202ENST00000535042 FABP4P15090 132 aa8.47□□□□□ -1.05
TMEM258-202ENST00000535042 SPAG11BQ08648 103 aa8.47□□□□□ -1.05
TMEM258-202ENST00000535042 COA6Q5JTJ3 125 aaKnown RBP8.47□□□□□ -1.05
TMEM258-202ENST00000535042 LINC01561Q8N1V8 128 aa8.47□□□□□ -1.05
TMEM258-202ENST00000535042 IGLC3P0DOY3 106 aa8.46□□□□□ -1.06
TMEM258-202ENST00000535042 KIAA0087Q14695 138 aa8.46□□□□□ -1.06
TMEM258-202ENST00000535042 LINC00469Q8N7U9 141 aa8.46□□□□□ -1.06
TMEM258-202ENST00000535042 OR10D4PQ8NGN7 298 aa8.46□□□□□ -1.06
TMEM258-202ENST00000535042 SDIM1Q6ZPB5 146 aa8.45□□□□□ -1.06
TMEM258-202ENST00000535042 Q6ZRU5 148 aa8.45□□□□□ -1.06
TMEM258-202ENST00000535042 CHAC1Q9BUX1 264 aa8.45□□□□□ -1.06
TMEM258-202ENST00000535042 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.44□□□□□ -1.06
TMEM258-202ENST00000535042 TRAV12-1A0A0B4J245 112 aa8.44□□□□□ -1.06
TMEM258-202ENST00000535042 C11orf86A6NJI1 115 aa8.44□□□□□ -1.06
TMEM258-202ENST00000535042 ZNF22P17026 224 aaPredicted RBP8.44□□□□□ -1.06
TMEM258-202ENST00000535042 XGP55808 180 aa8.44□□□□□ -1.06
TMEM258-202ENST00000535042 SYCNQ0VAF6 134 aa8.44□□□□□ -1.06
TMEM258-202ENST00000535042 C2orf48Q96LS8 159 aa8.44□□□□□ -1.06
TMEM258-202ENST00000535042 CHTOPQ9Y3Y2 248 aaKnown RBP8.44□□□□□ -1.06
TMEM258-202ENST00000535042 SMIM1B2RUZ4 78 aa8.43□□□□□ -1.06
TMEM258-202ENST00000535042 HAMPP81172 84 aa8.43□□□□□ -1.06
TMEM258-202ENST00000535042 C10orf25Q5T742 122 aa8.43□□□□□ -1.06
TMEM258-202ENST00000535042 Q6ZSA8 131 aa8.43□□□□□ -1.06
TMEM258-202ENST00000535042 CARD19Q96LW7 228 aa8.43□□□□□ -1.06
TMEM258-202ENST00000535042 CAMK2N2Q96S95 79 aa8.43□□□□□ -1.06
TMEM258-202ENST00000535042 MRPL35Q9NZE8 188 aaKnown RBP8.43□□□□□ -1.06
TMEM258-202ENST00000535042 HSPB8Q9UJY1 196 aa8.43□□□□□ -1.06
TMEM258-202ENST00000535042 H0Y8G0 127 aa8.42□□□□□ -1.06
TMEM258-202ENST00000535042 PANO1I0J062 215 aa8.42□□□□□ -1.06
TMEM258-202ENST00000535042 CDK2AP2O75956 126 aa8.42□□□□□ -1.06
TMEM258-202ENST00000535042 SPINK8P0C7L1 97 aa8.42□□□□□ -1.06
TMEM258-202ENST00000535042 ODF1Q14990 250 aa8.42□□□□□ -1.06
TMEM258-202ENST00000535042 UNQ6190/PRO20217Q6UXQ8 127 aa8.42□□□□□ -1.06
TMEM258-202ENST00000535042 PACRGQ96M98 296 aaPredicted RBP8.42□□□□□ -1.06
TMEM258-202ENST00000535042 TOMM7Q9P0U1 55 aa8.42□□□□□ -1.06
TMEM258-202ENST00000535042 KIAA1109Q2LD37 5005 aa8.41□□□□□ -1.06
TMEM258-202ENST00000535042 F8VRH5 84 aa8.41□□□□□ -1.06
TMEM258-202ENST00000535042 C2orf82Q6UX34 121 aa8.41□□□□□ -1.06
TMEM258-202ENST00000535042 KRTAP17-1Q9BYP8 105 aa8.41□□□□□ -1.06
TMEM258-202ENST00000535042 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.41□□□□□ -1.06
TMEM258-202ENST00000535042 CHTF8P0CG12 524 aa8.4□□□□□ -1.06
TMEM258-202ENST00000535042 Q8IZM0 81 aa8.4□□□□□ -1.06
TMEM258-202ENST00000535042 F8WDY8 70 aa8.39□□□□□ -1.07
TMEM258-202ENST00000535042 H3BRM9 83 aa8.39□□□□□ -1.07
TMEM258-202ENST00000535042 NDUFA1O15239 70 aa8.39□□□□□ -1.07
TMEM258-202ENST00000535042 TMEM170BQ5T4T1 132 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms