RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	LINC00694	P0DN24	101 aa		7.6	□□□□□ -1.19
CTNND1-238	ENST00000534647	RPL39L	Q96EH5	51 aa	Known RBP	7.6	□□□□□ -1.19
CTNND1-238	ENST00000534647	MAP1LC3C	Q9BXW4	147 aa		7.6	□□□□□ -1.19
CTNND1-238	ENST00000534647	IGHV3-73	A0A0B4J1V6	119 aa		7.59	□□□□□ -1.19
CTNND1-238	ENST00000534647	GAGE12J	A6NER3	117 aa		7.59	□□□□□ -1.19
CTNND1-238	ENST00000534647	C3orf79	P0CE67	100 aa		7.59	□□□□□ -1.19
CTNND1-238	ENST00000534647	FCER1G	P30273	86 aa		7.59	□□□□□ -1.19
CTNND1-238	ENST00000534647	RPL32	P62910	135 aa	Known RBP	7.59	□□□□□ -1.19
CTNND1-238	ENST00000534647	ORMDL2	Q53FV1	153 aa		7.59	□□□□□ -1.19
CTNND1-238	ENST00000534647	PAPPA-AS1	Q5QFB9	102 aa		7.59	□□□□□ -1.19
CTNND1-238	ENST00000534647	KIR2DL4	Q99706	377 aa		7.59	□□□□□ -1.19
CTNND1-238	ENST00000534647	TRBV6-5	A0A0K0K1A5	114 aa		7.58	□□□□□ -1.2
CTNND1-238	ENST00000534647		M0QY20	66 aa		7.58	□□□□□ -1.2
CTNND1-238	ENST00000534647	G0S2	P27469	103 aa		7.58	□□□□□ -1.2
CTNND1-238	ENST00000534647	KRTAP10-4	P60372	401 aa	Predicted RBP	7.58	□□□□□ -1.2
CTNND1-238	ENST00000534647		Q8N976	141 aa		7.58	□□□□□ -1.2
CTNND1-238	ENST00000534647	SDHAF1	A6NFY7	115 aa		7.57	□□□□□ -1.2
CTNND1-238	ENST00000534647	TCAP	O15273	167 aa		7.57	□□□□□ -1.2
CTNND1-238	ENST00000534647	OXT	P01178	125 aa		7.57	□□□□□ -1.2
CTNND1-238	ENST00000534647	UFSP1	Q6NVU6	142 aa		7.57	□□□□□ -1.2
CTNND1-238	ENST00000534647	DAZ4	Q86SG3	579 aa	Known RBP	7.57	□□□□□ -1.2
CTNND1-238	ENST00000534647		Q8N3U1	123 aa		7.57	□□□□□ -1.2
CTNND1-238	ENST00000534647	RMI2	Q96E14	147 aa		7.57	□□□□□ -1.2
CTNND1-238	ENST00000534647	CHAC1	Q9BUX1	264 aa		7.57	□□□□□ -1.2
CTNND1-238	ENST00000534647	DAZ3	Q9NR90	486 aa	Known RBP	7.57	□□□□□ -1.2
CTNND1-238	ENST00000534647	SYS1-DBNDD2	H3BUS1	97 aa		7.56	□□□□□ -1.2
CTNND1-238	ENST00000534647	SCX	Q7RTU7	201 aa		7.56	□□□□□ -1.2
CTNND1-238	ENST00000534647	BAALC	Q8WXS3	180 aa		7.56	□□□□□ -1.2
CTNND1-238	ENST00000534647	DNAJC30	Q96LL9	226 aa		7.56	□□□□□ -1.2
CTNND1-238	ENST00000534647	LINC01549	A6NIU2	74 aa		7.55	□□□□□ -1.2
CTNND1-238	ENST00000534647	LECT2	O14960	151 aa		7.55	□□□□□ -1.2
CTNND1-238	ENST00000534647	ATP5L	O75964	103 aa		7.55	□□□□□ -1.2
CTNND1-238	ENST00000534647	POLR2K	P53803	58 aa	Known RBP	7.55	□□□□□ -1.2
CTNND1-238	ENST00000534647	GAGE1	Q13065	139 aa		7.55	□□□□□ -1.2
CTNND1-238	ENST00000534647	GAGE4	Q13068	117 aa		7.55	□□□□□ -1.2
CTNND1-238	ENST00000534647	GAGE5	Q13069	117 aa		7.55	□□□□□ -1.2
CTNND1-238	ENST00000534647	LINC00173	Q6ZV60	143 aa		7.55	□□□□□ -1.2
CTNND1-238	ENST00000534647	IFI27L1	Q96BM0	104 aa		7.55	□□□□□ -1.2
CTNND1-238	ENST00000534647	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	7.54	□□□□□ -1.2
CTNND1-238	ENST00000534647		A0A096LNJ9	63 aa		7.54	□□□□□ -1.2
CTNND1-238	ENST00000534647		I3L3M4	83 aa		7.54	□□□□□ -1.2
CTNND1-238	ENST00000534647	CIRBP-AS1	Q8TBR5	109 aa		7.54	□□□□□ -1.2
CTNND1-238	ENST00000534647	CHCHD7	Q9BUK0	85 aa		7.54	□□□□□ -1.2
CTNND1-238	ENST00000534647	VAMP8	Q9BV40	100 aa		7.54	□□□□□ -1.2
CTNND1-238	ENST00000534647		Q9UF83	564 aa		7.54	□□□□□ -1.2
CTNND1-238	ENST00000534647	TRBV27	A0A0K0K1C4	114 aa		7.53	□□□□□ -1.2
CTNND1-238	ENST00000534647	TSTD3	H0UI37	97 aa		7.53	□□□□□ -1.2
CTNND1-238	ENST00000534647	TEX43	Q6ZNM6	134 aa		7.53	□□□□□ -1.2
CTNND1-238	ENST00000534647	CYSLTR1	Q9Y271	337 aa		7.53	□□□□□ -1.2
CTNND1-238	ENST00000534647	TRBV10-1	A0A0K0K1A3	114 aa		7.52	□□□□□ -1.21
CTNND1-238	ENST00000534647	PRSS1	P07477	247 aa		7.52	□□□□□ -1.21
CTNND1-238	ENST00000534647	SEC61G	P60059	68 aa		7.52	□□□□□ -1.21
CTNND1-238	ENST00000534647	PKIA	P61925	76 aa		7.52	□□□□□ -1.21
CTNND1-238	ENST00000534647	RPL36A	P83881	106 aa	Known RBP	7.52	□□□□□ -1.21
CTNND1-238	ENST00000534647	FOXI1	Q12951	378 aa		7.52	□□□□□ -1.21
CTNND1-238	ENST00000534647	LINC01620	Q4KN68	170 aa		7.52	□□□□□ -1.21
CTNND1-238	ENST00000534647	C2orf66	Q6UXQ4	117 aa		7.52	□□□□□ -1.21
CTNND1-238	ENST00000534647		Q6ZN92	141 aa		7.52	□□□□□ -1.21
CTNND1-238	ENST00000534647	RPL36AL	Q969Q0	106 aa	Known RBP	7.52	□□□□□ -1.21
CTNND1-238	ENST00000534647	TOMM6	Q96B49	74 aa		7.52	□□□□□ -1.21
CTNND1-238	ENST00000534647	SCGB3A1	Q96QR1	104 aa		7.52	□□□□□ -1.21
CTNND1-238	ENST00000534647	HSBP1L1	C9JCN9	74 aa		7.51	□□□□□ -1.21
CTNND1-238	ENST00000534647	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	7.51	□□□□□ -1.21
CTNND1-238	ENST00000534647	NEXN-AS1	Q8NBZ9	246 aa		7.51	□□□□□ -1.21
CTNND1-238	ENST00000534647	KLK12	Q9UKR0	248 aa		7.51	□□□□□ -1.21
CTNND1-238	ENST00000534647	IGKV2D-24	A0A075B6R9	120 aa		7.5	□□□□□ -1.21
CTNND1-238	ENST00000534647	C14orf177	Q52M58	125 aa		7.5	□□□□□ -1.21
CTNND1-238	ENST00000534647	LINC01545	Q5VT33	79 aa		7.5	□□□□□ -1.21
CTNND1-238	ENST00000534647		A0A087WX48	190 aa		7.49	□□□□□ -1.21
CTNND1-238	ENST00000534647	hDV102S1	A0JD36	115 aa		7.49	□□□□□ -1.21
CTNND1-238	ENST00000534647	TSHB	P01222	138 aa		7.49	□□□□□ -1.21
CTNND1-238	ENST00000534647	COTL1	Q14019	142 aa		7.49	□□□□□ -1.21
CTNND1-238	ENST00000534647	ATOH7	Q8N100	152 aa		7.49	□□□□□ -1.21
CTNND1-238	ENST00000534647	UBE2W	Q96B02	151 aa		7.49	□□□□□ -1.21
CTNND1-238	ENST00000534647	TMEM141	Q96I45	108 aa		7.49	□□□□□ -1.21
CTNND1-238	ENST00000534647	PRO1933	Q9H354	126 aa		7.49	□□□□□ -1.21
CTNND1-238	ENST00000534647	TRBV7-3	A0A075B6L6	115 aa		7.48	□□□□□ -1.21
CTNND1-238	ENST00000534647	UBE2D3	P61077	147 aa		7.48	□□□□□ -1.21
CTNND1-238	ENST00000534647	UBE2D2	P62837	147 aa		7.48	□□□□□ -1.21
CTNND1-238	ENST00000534647	SPATA45	Q537H7	98 aa		7.48	□□□□□ -1.21
CTNND1-238	ENST00000534647	ZNF664	Q8N3J9	261 aa		7.48	□□□□□ -1.21
CTNND1-238	ENST00000534647	C20orf203	Q8NBC4	194 aa		7.47	□□□□□ -1.21
CTNND1-238	ENST00000534647	TIMM17A	Q99595	171 aa		7.47	□□□□□ -1.21
CTNND1-238	ENST00000534647	PMCHL2	Q9BQD1	86 aa		7.47	□□□□□ -1.21
CTNND1-238	ENST00000534647	TRAV12-1	A0A0B4J245	112 aa		7.46	□□□□□ -1.22
CTNND1-238	ENST00000534647	SMAGP	Q0VAQ4	97 aa		7.46	□□□□□ -1.22
CTNND1-238	ENST00000534647	ENHO	Q6UWT2	76 aa		7.46	□□□□□ -1.22
CTNND1-238	ENST00000534647	DNAH8	Q96JB1	4490 aa		7.45	□□□□□ -1.22
CTNND1-238	ENST00000534647	TRBV6-8	A0A0A6YYG3	113 aa		7.45	□□□□□ -1.22
CTNND1-238	ENST00000534647	DPM2	O94777	84 aa		7.45	□□□□□ -1.22
CTNND1-238	ENST00000534647	IGKC	P01834	107 aa		7.45	□□□□□ -1.22
CTNND1-238	ENST00000534647	RPL39	P62891	51 aa	Known RBP	7.45	□□□□□ -1.22
CTNND1-238	ENST00000534647	GEMIN7	Q9H840	131 aa	Known RBP	7.45	□□□□□ -1.22
CTNND1-238	ENST00000534647	PLN	P26678	52 aa		7.44	□□□□□ -1.22
CTNND1-238	ENST00000534647	RPL37A	P61513	92 aa	Known RBP	7.44	□□□□□ -1.22
CTNND1-238	ENST00000534647	TMEM97	Q5BJF2	176 aa		7.44	□□□□□ -1.22
CTNND1-238	ENST00000534647	C9orf163	Q8N9P6	203 aa		7.44	□□□□□ -1.22
CTNND1-238	ENST00000534647	LRP1	Q07954	4544 aa	Known RBP	7.44	□□□□□ -1.22
CTNND1-238	ENST00000534647	IGIP	A6NJ69	53 aa		7.43	□□□□□ -1.22
CTNND1-238	ENST00000534647	TMEM262	E9PQX1	116 aa		7.43	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms