RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 SVBPQ8N300 66 aa8.84□□□□□ -0.99
SF3B2-215ENST00000534307 SPANXA1Q9NS26 97 aa8.84□□□□□ -0.99
SF3B2-215ENST00000534307 ZNF561-AS1K7EIQ3 104 aa8.83□□□□□ -1
SF3B2-215ENST00000534307 SNAPINO95295 136 aa8.83□□□□□ -1
SF3B2-215ENST00000534307 MRPS36P82909 103 aaKnown RBP8.83□□□□□ -1
SF3B2-215ENST00000534307 SYCNQ0VAF6 134 aa8.83□□□□□ -1
SF3B2-215ENST00000534307 TMEM136Q6ZRR5 245 aa8.83□□□□□ -1
SF3B2-215ENST00000534307 IGLV4-69A0A075B6H9 119 aa8.82□□□□□ -1
SF3B2-215ENST00000534307 PRSS47A8MTI9 375 aa8.82□□□□□ -1
SF3B2-215ENST00000534307 MALP21145 153 aa8.82□□□□□ -1
SF3B2-215ENST00000534307 COX19Q49B96 90 aa8.82□□□□□ -1
SF3B2-215ENST00000534307 STPG4Q8N801 248 aa8.82□□□□□ -1
SF3B2-215ENST00000534307 PRELID3AQ96N28 172 aa8.82□□□□□ -1
SF3B2-215ENST00000534307 OPRPNQ99935 248 aaPredicted RBP8.82□□□□□ -1
SF3B2-215ENST00000534307 LINC00474Q9P2X8 69 aa8.82□□□□□ -1
SF3B2-215ENST00000534307 PKIGQ9Y2B9 76 aa8.82□□□□□ -1
SF3B2-215ENST00000534307 APOC3P02656 99 aa8.81□□□□□ -1
SF3B2-215ENST00000534307 Q6ZRU5 148 aa8.81□□□□□ -1
SF3B2-215ENST00000534307 C5orf38Q86SI9 138 aa8.81□□□□□ -1
SF3B2-215ENST00000534307 RPS10P5Q9NQ39 176 aa8.81□□□□□ -1
SF3B2-215ENST00000534307 LAMTOR2Q9Y2Q5 125 aa8.81□□□□□ -1
SF3B2-215ENST00000534307 IGHV3OR16-9A0A0B4J2B5 98 aa8.8□□□□□ -1
SF3B2-215ENST00000534307 C7orf33Q8WU49 177 aa8.8□□□□□ -1
SF3B2-215ENST00000534307 PTTG1IPP53801 180 aa8.79□□□□□ -1
SF3B2-215ENST00000534307 C2orf48Q96LS8 159 aa8.79□□□□□ -1
SF3B2-215ENST00000534307 PYGO1Q9Y3Y4 419 aa8.79□□□□□ -1
SF3B2-215ENST00000534307 MT1HL1P0DM35 61 aa8.78□□□□□ -1
SF3B2-215ENST00000534307 RAB5AP20339 215 aa8.78□□□□□ -1
SF3B2-215ENST00000534307 PRR3P79522 188 aaKnown RBP8.78□□□□□ -1
SF3B2-215ENST00000534307 CAMK2N2Q96S95 79 aa8.78□□□□□ -1
SF3B2-215ENST00000534307 IGLV4-3A0A075B6K6 122 aa8.77□□□□□ -1.01
SF3B2-215ENST00000534307 LOC107984640A0A0U1RRK4 108 aa8.77□□□□□ -1.01
SF3B2-215ENST00000534307 IFITM10A6NMD0 228 aa8.77□□□□□ -1.01
SF3B2-215ENST00000534307 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.77□□□□□ -1.01
SF3B2-215ENST00000534307 APOMO95445 188 aa8.77□□□□□ -1.01
SF3B2-215ENST00000534307 SPAG11BQ08648 103 aa8.77□□□□□ -1.01
SF3B2-215ENST00000534307 OR10D4PQ8NGN7 298 aa8.77□□□□□ -1.01
SF3B2-215ENST00000534307 MAP1LC3AQ9H492 121 aa8.77□□□□□ -1.01
SF3B2-215ENST00000534307 MT-ND6P03923 174 aa8.76□□□□□ -1.01
SF3B2-215ENST00000534307 IFI27P40305 119 aaPredicted RBP8.76□□□□□ -1.01
SF3B2-215ENST00000534307 Q8N8P6 123 aa8.76□□□□□ -1.01
SF3B2-215ENST00000534307 GNB1LQ9BYB4 327 aa8.76□□□□□ -1.01
SF3B2-215ENST00000534307 LOC389332A0A1B0GUA5 103 aa8.75□□□□□ -1.01
SF3B2-215ENST00000534307 RNF151Q2KHN1 245 aa8.75□□□□□ -1.01
SF3B2-215ENST00000534307 A0A1W2PNN7 141 aa8.74□□□□□ -1.01
SF3B2-215ENST00000534307 F8WDY8 70 aa8.74□□□□□ -1.01
SF3B2-215ENST00000534307 GAGE2BQ13066 116 aa8.74□□□□□ -1.01
SF3B2-215ENST00000534307 LINC00242Q5T6M2 205 aa8.74□□□□□ -1.01
SF3B2-215ENST00000534307 ORAOV1Q8WV07 137 aa8.74□□□□□ -1.01
SF3B2-215ENST00000534307 TMEM141Q96I45 108 aa8.74□□□□□ -1.01
SF3B2-215ENST00000534307 MRPL35Q9NZE8 188 aaKnown RBP8.74□□□□□ -1.01
SF3B2-215ENST00000534307 A0A087WZ39 114 aa8.73□□□□□ -1.01
SF3B2-215ENST00000534307 A0A0J9YXV3 536 aa8.73□□□□□ -1.01
SF3B2-215ENST00000534307 K7EMI3 77 aa8.73□□□□□ -1.01
SF3B2-215ENST00000534307 KIAA1644Q3SXP7 199 aa8.73□□□□□ -1.01
SF3B2-215ENST00000534307 C2orf66Q6UXQ4 117 aa8.73□□□□□ -1.01
SF3B2-215ENST00000534307 LINC00173Q6ZV60 143 aa8.73□□□□□ -1.01
SF3B2-215ENST00000534307 UBE2D1P51668 147 aa8.72□□□□□ -1.01
SF3B2-215ENST00000534307 KIAA0087Q14695 138 aa8.72□□□□□ -1.01
SF3B2-215ENST00000534307 C10orf25Q5T742 122 aa8.72□□□□□ -1.01
SF3B2-215ENST00000534307 SLC7A5P1Q8MH63 180 aa8.72□□□□□ -1.01
SF3B2-215ENST00000534307 AMELXQ99217 191 aa8.72□□□□□ -1.01
SF3B2-215ENST00000534307 CYSLTR1Q9Y271 337 aa8.72□□□□□ -1.01
SF3B2-215ENST00000534307 TGIF2-C20orf24A0A0A6YYL0 155 aa8.71□□□□□ -1.02
SF3B2-215ENST00000534307 IGIPA6NJ69 53 aa8.71□□□□□ -1.02
SF3B2-215ENST00000534307 ORMDL2Q53FV1 153 aa8.71□□□□□ -1.02
SF3B2-215ENST00000534307 C9orf116Q5BN46 136 aaPredicted RBP8.71□□□□□ -1.02
SF3B2-215ENST00000534307 NDUFA1O15239 70 aa8.7□□□□□ -1.02
SF3B2-215ENST00000534307 NPSP0C0P6 89 aa8.7□□□□□ -1.02
SF3B2-215ENST00000534307 TLX1NBP0CAT3 122 aa8.7□□□□□ -1.02
SF3B2-215ENST00000534307 G0S2P27469 103 aa8.7□□□□□ -1.02
SF3B2-215ENST00000534307 RPL18AQ02543 176 aaKnown RBP8.7□□□□□ -1.02
SF3B2-215ENST00000534307 SRSF9Q13242 221 aaKnown RBP eCLIP8.7□□□□□ -1.02
SF3B2-215ENST00000534307 ZC2HC1BQ5TFG8 222 aa8.7□□□□□ -1.02
SF3B2-215ENST00000534307 UNQ6190/PRO20217Q6UXQ8 127 aa8.7□□□□□ -1.02
SF3B2-215ENST00000534307 TEX43Q6ZNM6 134 aa8.7□□□□□ -1.02
SF3B2-215ENST00000534307 NXT2Q9NPJ8 142 aaKnown RBP8.7□□□□□ -1.02
SF3B2-215ENST00000534307 SMCO4Q9NRQ5 59 aa8.7□□□□□ -1.02
SF3B2-215ENST00000534307 Q6ZRP5 223 aa8.69□□□□□ -1.02
SF3B2-215ENST00000534307 FAM19A3Q7Z5A8 133 aa8.69□□□□□ -1.02
SF3B2-215ENST00000534307 LINC01561Q8N1V8 128 aa8.69□□□□□ -1.02
SF3B2-215ENST00000534307 C6orf48Q9UBA6 75 aa8.69□□□□□ -1.02
SF3B2-215ENST00000534307 SPINK6Q6UWN8 80 aa8.68□□□□□ -1.02
SF3B2-215ENST00000534307 LINC01600Q96MT4 127 aa8.68□□□□□ -1.02
SF3B2-215ENST00000534307 C2orf88Q9BSF0 95 aa8.68□□□□□ -1.02
SF3B2-215ENST00000534307 MRPL18Q9H0U6 180 aaKnown RBP8.68□□□□□ -1.02
SF3B2-215ENST00000534307 FABP9Q0Z7S8 132 aa8.67□□□□□ -1.02
SF3B2-215ENST00000534307 Q6ZN92 141 aa8.67□□□□□ -1.02
SF3B2-215ENST00000534307 ALKBH7Q9BT30 221 aaPredicted RBP8.67□□□□□ -1.02
SF3B2-215ENST00000534307 VCX2Q9H322 139 aa8.67□□□□□ -1.02
SF3B2-215ENST00000534307 TRAPPC1Q9Y5R8 145 aa8.67□□□□□ -1.02
SF3B2-215ENST00000534307 TOMM6Q96B49 74 aa8.66□□□□□ -1.02
SF3B2-215ENST00000534307 YPEL4Q96NS1 127 aa8.66□□□□□ -1.02
SF3B2-215ENST00000534307 TIMM17AQ99595 171 aa8.66□□□□□ -1.02
SF3B2-215ENST00000534307 TRBV30A0A0K0K1B3 111 aa8.65□□□□□ -1.02
SF3B2-215ENST00000534307 LINC01546A6NGU7 62 aa8.65□□□□□ -1.02
SF3B2-215ENST00000534307 LINC01549A6NIU2 74 aa8.65□□□□□ -1.02
SF3B2-215ENST00000534307 C2orf82Q6UX34 121 aa8.65□□□□□ -1.02
SF3B2-215ENST00000534307 PHF5AQ7RTV0 110 aaKnown RBP8.65□□□□□ -1.02
SF3B2-215ENST00000534307 PSORS1C2Q9UIG4 136 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms