RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 TIMM21Q9BVV7 248 aa8.89□□□□□ -0.99
CTSB-230ENST00000534149 IGHV3OR16-9A0A0B4J2B5 98 aa8.88□□□□□ -0.99
CTSB-230ENST00000534149 TMEM241Q24JQ0 296 aa8.88□□□□□ -0.99
CTSB-230ENST00000534149 TMEM18Q96B42 140 aa8.88□□□□□ -0.99
CTSB-230ENST00000534149 TMEM250H0YL14 139 aa8.87□□□□□ -0.99
CTSB-230ENST00000534149 CEBPGP53567 150 aa8.87□□□□□ -0.99
CTSB-230ENST00000534149 RPL39P62891 51 aaKnown RBP8.87□□□□□ -0.99
CTSB-230ENST00000534149 FAM104AQ969W3 186 aa8.87□□□□□ -0.99
CTSB-230ENST00000534149 CARHSP1Q9Y2V2 147 aaKnown RBP8.87□□□□□ -0.99
CTSB-230ENST00000534149 PPP1R17O96001 155 aa8.86□□□□□ -0.99
CTSB-230ENST00000534149 PPP1R2P9O14990 202 aa8.85□□□□□ -0.99
CTSB-230ENST00000534149 MUC17Q685J3 4493 aa8.84□□□□□ -0.99
CTSB-230ENST00000534149 RIGQ13278 110 aa8.84□□□□□ -0.99
CTSB-230ENST00000534149 C9orf129Q5T035 196 aaKnown RBP8.84□□□□□ -0.99
CTSB-230ENST00000534149 IFITM10A6NMD0 228 aa8.83□□□□□ -1
CTSB-230ENST00000534149 ZNF861PO60384 105 aa8.83□□□□□ -1
CTSB-230ENST00000534149 KIAA0087Q14695 138 aa8.83□□□□□ -1
CTSB-230ENST00000534149 MRPL51Q4U2R6 128 aaKnown RBP8.83□□□□□ -1
CTSB-230ENST00000534149 LINC01551Q86U37 167 aa8.83□□□□□ -1
CTSB-230ENST00000534149 SLC51BQ86UW2 128 aa8.83□□□□□ -1
CTSB-230ENST00000534149 HBBP68871 147 aa8.82□□□□□ -1
CTSB-230ENST00000534149 C2orf82Q6UX34 121 aa8.82□□□□□ -1
CTSB-230ENST00000534149 SMIM7Q9BQ49 75 aa8.82□□□□□ -1
CTSB-230ENST00000534149 OSTCQ9NRP0 149 aa8.82□□□□□ -1
CTSB-230ENST00000534149 SPANXA1Q9NS26 97 aa8.82□□□□□ -1
CTSB-230ENST00000534149 TGIF2-C20orf24A0A0A6YYL0 155 aa8.81□□□□□ -1
CTSB-230ENST00000534149 TRBV30A0A0K0K1B3 111 aa8.81□□□□□ -1
CTSB-230ENST00000534149 NDUFC2-KCTD14E9PQ53 114 aa8.81□□□□□ -1
CTSB-230ENST00000534149 MRPS36P82909 103 aaKnown RBP8.81□□□□□ -1
CTSB-230ENST00000534149 A0A087X002 238 aa8.8□□□□□ -1
CTSB-230ENST00000534149 FAM104BQ5XKR9 115 aa8.8□□□□□ -1
CTSB-230ENST00000534149 C20orf78Q9BR46 151 aa8.8□□□□□ -1
CTSB-230ENST00000534149 V9GYV3 84 aa8.8□□□□□ -1
CTSB-230ENST00000534149 TCAPO15273 167 aa8.79□□□□□ -1
CTSB-230ENST00000534149 RPL32P62910 135 aaKnown RBP8.79□□□□□ -1
CTSB-230ENST00000534149 PACRGQ96M98 296 aaPredicted RBP8.79□□□□□ -1
CTSB-230ENST00000534149 SMIM2Q9BVW6 85 aa8.79□□□□□ -1
CTSB-230ENST00000534149 TRBV24-1A0A075B6N3 115 aa8.78□□□□□ -1
CTSB-230ENST00000534149 CKS2P33552 79 aa8.78□□□□□ -1
CTSB-230ENST00000534149 LINC00862A6NCI5 91 aa8.77□□□□□ -1.01
CTSB-230ENST00000534149 ZNF727A8MUV8 499 aa8.77□□□□□ -1.01
CTSB-230ENST00000534149 NUPR1O60356 82 aa8.77□□□□□ -1.01
CTSB-230ENST00000534149 TNFRSF6BO95407 300 aa8.77□□□□□ -1.01
CTSB-230ENST00000534149 LINC00242Q5T6M2 205 aa8.77□□□□□ -1.01
CTSB-230ENST00000534149 TYMSOSQ8TAI1 123 aa8.77□□□□□ -1.01
CTSB-230ENST00000534149 CTDSP1Q9GZU7 261 aa8.77□□□□□ -1.01
CTSB-230ENST00000534149 NAT8BQ9UHF3 227 aa8.77□□□□□ -1.01
CTSB-230ENST00000534149 C22orf24Q9Y442 160 aa8.77□□□□□ -1.01
CTSB-230ENST00000534149 BLOC1S1P78537 153 aa8.76□□□□□ -1.01
CTSB-230ENST00000534149 LINC00469Q8N7U9 141 aa8.76□□□□□ -1.01
CTSB-230ENST00000534149 RETNLBQ9BQ08 111 aa8.76□□□□□ -1.01
CTSB-230ENST00000534149 CRYGAP11844 174 aa8.75□□□□□ -1.01
CTSB-230ENST00000534149 ALKAL2Q6UX46 152 aa8.75□□□□□ -1.01
CTSB-230ENST00000534149 EIF5A2Q9GZV4 153 aaKnown RBP8.75□□□□□ -1.01
CTSB-230ENST00000534149 D6R8Y8 96 aa8.74□□□□□ -1.01
CTSB-230ENST00000534149 NPYP01303 97 aa8.74□□□□□ -1.01
CTSB-230ENST00000534149 IFI27P40305 119 aaPredicted RBP8.74□□□□□ -1.01
CTSB-230ENST00000534149 TCTE3Q8IZS6 198 aa8.74□□□□□ -1.01
CTSB-230ENST00000534149 IGLV4-3A0A075B6K6 122 aa8.73□□□□□ -1.01
CTSB-230ENST00000534149 RPL28P46779 137 aaKnown RBP8.73□□□□□ -1.01
CTSB-230ENST00000534149 FAM74A3Q4VXF1 159 aa8.73□□□□□ -1.01
CTSB-230ENST00000534149 XAGE1AQ9HD64 81 aa8.73□□□□□ -1.01
CTSB-230ENST00000534149 ANAPC11Q9NYG5 84 aa8.73□□□□□ -1.01
CTSB-230ENST00000534149 SRP19P09132 144 aaKnown RBP8.72□□□□□ -1.01
CTSB-230ENST00000534149 LBHQ53QV2 105 aaPredicted RBP8.72□□□□□ -1.01
CTSB-230ENST00000534149 TOMM7Q9P0U1 55 aa8.72□□□□□ -1.01
CTSB-230ENST00000534149 BCE1O60756 84 aa8.71□□□□□ -1.02
CTSB-230ENST00000534149 PRSS2P07478 247 aa8.71□□□□□ -1.02
CTSB-230ENST00000534149 TMEM141Q96I45 108 aa8.71□□□□□ -1.02
CTSB-230ENST00000534149 CDIP1Q9H305 208 aa8.71□□□□□ -1.02
CTSB-230ENST00000534149 A0A1B0GW15 77 aa8.7□□□□□ -1.02
CTSB-230ENST00000534149 SMIM27A0A1W2PRY6 76 aa8.7□□□□□ -1.02
CTSB-230ENST00000534149 CKS1BP61024 79 aa8.7□□□□□ -1.02
CTSB-230ENST00000534149 RPL23P62829 140 aaKnown RBP8.7□□□□□ -1.02
CTSB-230ENST00000534149 KRTAP13-2Q52LG2 175 aa8.7□□□□□ -1.02
CTSB-230ENST00000534149 ZC2HC1BQ5TFG8 222 aa8.7□□□□□ -1.02
CTSB-230ENST00000534149 MRPL55Q7Z7F7 128 aaKnown RBP8.7□□□□□ -1.02
CTSB-230ENST00000534149 LINC01561Q8N1V8 128 aa8.7□□□□□ -1.02
CTSB-230ENST00000534149 PYGO1Q9Y3Y4 419 aa8.7□□□□□ -1.02
CTSB-230ENST00000534149 RAB5AP20339 215 aa8.69□□□□□ -1.02
CTSB-230ENST00000534149 ADIRFQ15847 76 aa8.69□□□□□ -1.02
CTSB-230ENST00000534149 MRPL54Q6P161 138 aaKnown RBP8.69□□□□□ -1.02
CTSB-230ENST00000534149 TEX43Q6ZNM6 134 aa8.69□□□□□ -1.02
CTSB-230ENST00000534149 TPRXLQ17RH7 258 aa8.68□□□□□ -1.02
CTSB-230ENST00000534149 C6orf226Q5I0X4 101 aa8.68□□□□□ -1.02
CTSB-230ENST00000534149 Q6ZN92 141 aa8.68□□□□□ -1.02
CTSB-230ENST00000534149 TP73-AS1Q9UF72 201 aa8.68□□□□□ -1.02
CTSB-230ENST00000534149 RPL37AP8A6NKH3 93 aa8.67□□□□□ -1.02
CTSB-230ENST00000534149 F8W036 122 aa8.67□□□□□ -1.02
CTSB-230ENST00000534149 Q8IZM0 81 aa8.67□□□□□ -1.02
CTSB-230ENST00000534149 LINC00304Q8N9R0 145 aa8.67□□□□□ -1.02
CTSB-230ENST00000534149 C2orf88Q9BSF0 95 aa8.67□□□□□ -1.02
CTSB-230ENST00000534149 PPBPP02775 128 aa8.66□□□□□ -1.02
CTSB-230ENST00000534149 LINC00173Q6ZV60 143 aa8.66□□□□□ -1.02
CTSB-230ENST00000534149 ALKBH7Q9BT30 221 aaPredicted RBP8.66□□□□□ -1.02
CTSB-230ENST00000534149 IGLV7-46A0A075B6I9 117 aa8.65□□□□□ -1.02
CTSB-230ENST00000534149 A0A1B0GXF2 115 aa8.65□□□□□ -1.02
CTSB-230ENST00000534149 S100A8P05109 93 aa8.65□□□□□ -1.02
CTSB-230ENST00000534149 ORMDL3Q8N138 153 aa8.65□□□□□ -1.02
CTSB-230ENST00000534149 LINC00167Q96N53 147 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms