RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 CKS2P33552 79 aa10.27□□□□□ -0.77
CAPRIN1-216ENST00000534042 RPL32P62910 135 aaKnown RBP10.27□□□□□ -0.77
CAPRIN1-216ENST00000534042 IGHV3OR16-9A0A0B4J2B5 98 aa10.26□□□□□ -0.77
CAPRIN1-216ENST00000534042 RPL23P62829 140 aaKnown RBP10.26□□□□□ -0.77
CAPRIN1-216ENST00000534042 FAM74A3Q4VXF1 159 aa10.26□□□□□ -0.77
CAPRIN1-216ENST00000534042 PRR26Q8N8Z3 221 aa10.26□□□□□ -0.77
CAPRIN1-216ENST00000534042 SPANXA1Q9NS26 97 aa10.26□□□□□ -0.77
CAPRIN1-216ENST00000534042 SMIM27A0A1W2PRY6 76 aa10.25□□□□□ -0.77
CAPRIN1-216ENST00000534042 TNFRSF6BO95407 300 aa10.25□□□□□ -0.77
CAPRIN1-216ENST00000534042 ADIRFQ15847 76 aa10.25□□□□□ -0.77
CAPRIN1-216ENST00000534042 C10orf25Q5T742 122 aa10.25□□□□□ -0.77
CAPRIN1-216ENST00000534042 FAM104AQ969W3 186 aa10.25□□□□□ -0.77
CAPRIN1-216ENST00000534042 SMIM2Q9BVW6 85 aa10.25□□□□□ -0.77
CAPRIN1-216ENST00000534042 A0A1B0GW15 77 aa10.24□□□□□ -0.77
CAPRIN1-216ENST00000534042 FAM168BA1KXE4 195 aa10.24□□□□□ -0.77
CAPRIN1-216ENST00000534042 IFITM10A6NMD0 228 aa10.24□□□□□ -0.77
CAPRIN1-216ENST00000534042 TLX1NBP0CAT3 122 aa10.24□□□□□ -0.77
CAPRIN1-216ENST00000534042 HBBP68871 147 aa10.24□□□□□ -0.77
CAPRIN1-216ENST00000534042 MRPS36P82909 103 aaKnown RBP10.24□□□□□ -0.77
CAPRIN1-216ENST00000534042 UNQ6190/PRO20217Q6UXQ8 127 aa10.24□□□□□ -0.77
CAPRIN1-216ENST00000534042 H0Y9J4 135 aa10.23□□□□□ -0.77
CAPRIN1-216ENST00000534042 GAGE2EQ4V326 116 aa10.23□□□□□ -0.77
CAPRIN1-216ENST00000534042 FAM19A5Q7Z5A7 132 aaPredicted RBP10.23□□□□□ -0.77
CAPRIN1-216ENST00000534042 C6orf48Q9UBA6 75 aa10.23□□□□□ -0.77
CAPRIN1-216ENST00000534042 GAGE2DQ9UEU5 116 aa10.23□□□□□ -0.77
CAPRIN1-216ENST00000534042 D6R8Y8 96 aa10.22□□□□□ -0.77
CAPRIN1-216ENST00000534042 KRTAP11-1Q8IUC1 163 aa10.22□□□□□ -0.77
CAPRIN1-216ENST00000534042 NAT8Q9UHE5 227 aa10.22□□□□□ -0.77
CAPRIN1-216ENST00000534042 hCG_2014768A0A024R1R8 64 aa10.21□□□□□ -0.77
CAPRIN1-216ENST00000534042 TGIF2-C20orf24A0A0A6YYL0 155 aa10.21□□□□□ -0.77
CAPRIN1-216ENST00000534042 F8W036 122 aa10.21□□□□□ -0.77
CAPRIN1-216ENST00000534042 NPYP01303 97 aa10.21□□□□□ -0.77
CAPRIN1-216ENST00000534042 S100A8P05109 93 aa10.21□□□□□ -0.77
CAPRIN1-216ENST00000534042 SMDT1Q9H4I9 107 aa10.21□□□□□ -0.77
CAPRIN1-216ENST00000534042 MRPL54Q6P161 138 aaKnown RBP10.2□□□□□ -0.78
CAPRIN1-216ENST00000534042 IGLV1-50A0A075B6I6 118 aa10.19□□□□□ -0.78
CAPRIN1-216ENST00000534042 M0QXV9 152 aa10.18□□□□□ -0.78
CAPRIN1-216ENST00000534042 PPBPP02775 128 aa10.18□□□□□ -0.78
CAPRIN1-216ENST00000534042 RAB5AP20339 215 aa10.18□□□□□ -0.78
CAPRIN1-216ENST00000534042 IFI27P40305 119 aaPredicted RBP10.18□□□□□ -0.78
CAPRIN1-216ENST00000534042 UBE2BP63146 152 aa10.18□□□□□ -0.78
CAPRIN1-216ENST00000534042 KIAA0087Q14695 138 aa10.18□□□□□ -0.78
CAPRIN1-216ENST00000534042 C9JQL5 133 aa10.17□□□□□ -0.78
CAPRIN1-216ENST00000534042 KRTAP7-1Q8IUC3 87 aa10.17□□□□□ -0.78
CAPRIN1-216ENST00000534042 TRBV30A0A0K0K1B3 111 aa10.16□□□□□ -0.78
CAPRIN1-216ENST00000534042 A0A1B0GXF2 115 aa10.16□□□□□ -0.78
CAPRIN1-216ENST00000534042 LINC00242Q5T6M2 205 aa10.16□□□□□ -0.78
CAPRIN1-216ENST00000534042 PACRGQ96M98 296 aaPredicted RBP10.16□□□□□ -0.78
CAPRIN1-216ENST00000534042 PYGO1Q9Y3Y4 419 aa10.16□□□□□ -0.78
CAPRIN1-216ENST00000534042 KRTAP1-4P0C5Y4 121 aa10.15□□□□□ -0.78
CAPRIN1-216ENST00000534042 UBE2D1P51668 147 aa10.15□□□□□ -0.78
CAPRIN1-216ENST00000534042 PEA15Q15121 130 aa10.15□□□□□ -0.78
CAPRIN1-216ENST00000534042 ORMDL3Q8N138 153 aa10.15□□□□□ -0.78
CAPRIN1-216ENST00000534042 IGLV4-3A0A075B6K6 122 aa10.14□□□□□ -0.79
CAPRIN1-216ENST00000534042 NDUFC2-KCTD14E9PQ53 114 aa10.14□□□□□ -0.79
CAPRIN1-216ENST00000534042 C2orf82Q6UX34 121 aa10.14□□□□□ -0.79
CAPRIN1-216ENST00000534042 TMEM136Q6ZRR5 245 aa10.14□□□□□ -0.79
CAPRIN1-216ENST00000534042 TMEM141Q96I45 108 aa10.14□□□□□ -0.79
CAPRIN1-216ENST00000534042 PRELID3AQ96N28 172 aa10.14□□□□□ -0.79
CAPRIN1-216ENST00000534042 SRSF3P84103 164 aaKnown RBP10.13□□□□□ -0.79
CAPRIN1-216ENST00000534042 LPAP08519 4548 aa10.12□□□□□ -0.79
CAPRIN1-216ENST00000534042 RPL13AP40429 203 aaKnown RBP10.12□□□□□ -0.79
CAPRIN1-216ENST00000534042 C9orf129Q5T035 196 aaKnown RBP10.12□□□□□ -0.79
CAPRIN1-216ENST00000534042 TEX43Q6ZNM6 134 aa10.12□□□□□ -0.79
CAPRIN1-216ENST00000534042 PRR4Q16378 134 aa10.11□□□□□ -0.79
CAPRIN1-216ENST00000534042 LINC01561Q8N1V8 128 aa10.11□□□□□ -0.79
CAPRIN1-216ENST00000534042 C2orf88Q9BSF0 95 aa10.11□□□□□ -0.79
CAPRIN1-216ENST00000534042 ATP5L2Q7Z4Y8 100 aa10.1□□□□□ -0.79
CAPRIN1-216ENST00000534042 LOC389332A0A1B0GUA5 103 aa10.09□□□□□ -0.79
CAPRIN1-216ENST00000534042 PRSS2P07478 247 aa10.09□□□□□ -0.79
CAPRIN1-216ENST00000534042 Q6ZN92 141 aa10.09□□□□□ -0.79
CAPRIN1-216ENST00000534042 CARHSP1Q9Y2V2 147 aaKnown RBP10.09□□□□□ -0.79
CAPRIN1-216ENST00000534042 PRSS47A8MTI9 375 aa10.08□□□□□ -0.8
CAPRIN1-216ENST00000534042 CKS1BP61024 79 aa10.08□□□□□ -0.8
CAPRIN1-216ENST00000534042 MAP1LC3AQ9H492 121 aa10.08□□□□□ -0.8
CAPRIN1-216ENST00000534042 TOMM7Q9P0U1 55 aa10.08□□□□□ -0.8
CAPRIN1-216ENST00000534042 CYSLTR1Q9Y271 337 aa10.08□□□□□ -0.8
CAPRIN1-216ENST00000534042 LAMTOR2Q9Y2Q5 125 aa10.08□□□□□ -0.8
CAPRIN1-216ENST00000534042 ZNF861PO60384 105 aa10.07□□□□□ -0.8
CAPRIN1-216ENST00000534042 ZC2HC1BQ5TFG8 222 aa10.07□□□□□ -0.8
CAPRIN1-216ENST00000534042 C2orf66Q6UXQ4 117 aa10.07□□□□□ -0.8
CAPRIN1-216ENST00000534042 VCX2Q9H322 139 aa10.07□□□□□ -0.8
CAPRIN1-216ENST00000534042 C6orf226Q5I0X4 101 aa10.06□□□□□ -0.8
CAPRIN1-216ENST00000534042 LINC00173Q6ZV60 143 aa10.06□□□□□ -0.8
CAPRIN1-216ENST00000534042 LINC00469Q8N7U9 141 aa10.06□□□□□ -0.8
CAPRIN1-216ENST00000534042 AMELXQ99217 191 aa10.06□□□□□ -0.8
CAPRIN1-216ENST00000534042 NUPR1O60356 82 aa10.05□□□□□ -0.8
CAPRIN1-216ENST00000534042 LBHQ53QV2 105 aaPredicted RBP10.05□□□□□ -0.8
CAPRIN1-216ENST00000534042 Q8N8P6 123 aa10.05□□□□□ -0.8
CAPRIN1-216ENST00000534042 C22orf24Q9Y442 160 aa10.05□□□□□ -0.8
CAPRIN1-216ENST00000534042 Q8IZM0 81 aa10.04□□□□□ -0.8
CAPRIN1-216ENST00000534042 ALKBH7Q9BT30 221 aaPredicted RBP10.04□□□□□ -0.8
CAPRIN1-216ENST00000534042 XAGE1AQ9HD64 81 aa10.04□□□□□ -0.8
CAPRIN1-216ENST00000534042 ORMDL2Q53FV1 153 aa10.03□□□□□ -0.8
CAPRIN1-216ENST00000534042 CTDSP1Q9GZU7 261 aa10.03□□□□□ -0.8
CAPRIN1-216ENST00000534042 NPSP0C0P6 89 aa10.02□□□□□ -0.81
CAPRIN1-216ENST00000534042 IGIPA6NJ69 53 aa10.01□□□□□ -0.81
CAPRIN1-216ENST00000534042 TSPAN13O95857 204 aa10.01□□□□□ -0.81
CAPRIN1-216ENST00000534042 SEC11AP67812 179 aa10.01□□□□□ -0.81
CAPRIN1-216ENST00000534042 FAM19A3Q7Z5A8 133 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 282 ms