RNA–Protein interactions for RNA: ENST00000533943.1

MRPL49-208, Transcript of mitochondrial ribosomal protein L49, humanhuman

TSL 3

Gene MRPL49, Length 688 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-208ENST00000533943 LINC00474Q9P2X8 69 aa10.21□□□□□ -0.77
MRPL49-208ENST00000533943 LRP1Q07954 4544 aaKnown RBP10.21□□□□□ -0.78
MRPL49-208ENST00000533943 IGHV3OR16-9A0A0B4J2B5 98 aa10.2□□□□□ -0.78
MRPL49-208ENST00000533943 IGKV2-24A0A0C4DH68 120 aa10.2□□□□□ -0.78
MRPL49-208ENST00000533943 IFITM10A6NMD0 228 aa10.2□□□□□ -0.78
MRPL49-208ENST00000533943 KRTAP29-1A8MX34 341 aaPredicted RBP10.2□□□□□ -0.78
MRPL49-208ENST00000533943 K7EMI3 77 aa10.2□□□□□ -0.78
MRPL49-208ENST00000533943 MAJINQ3KP22 176 aa10.2□□□□□ -0.78
MRPL49-208ENST00000533943 C2orf48Q96LS8 159 aa10.2□□□□□ -0.78
MRPL49-208ENST00000533943 IGLV4-3A0A075B6K6 122 aa10.19□□□□□ -0.78
MRPL49-208ENST00000533943 A0A096LNI7 61 aa10.19□□□□□ -0.78
MRPL49-208ENST00000533943 J3QL48 77 aa10.18□□□□□ -0.78
MRPL49-208ENST00000533943 ORMDL2Q53FV1 153 aa10.18□□□□□ -0.78
MRPL49-208ENST00000533943 C10orf91Q5T1B1 145 aa10.18□□□□□ -0.78
MRPL49-208ENST00000533943 OR10D4PQ8NGN7 298 aa10.18□□□□□ -0.78
MRPL49-208ENST00000533943 TMEM141Q96I45 108 aa10.18□□□□□ -0.78
MRPL49-208ENST00000533943 NXT2Q9NPJ8 142 aaKnown RBP10.18□□□□□ -0.78
MRPL49-208ENST00000533943 CYSLTR1Q9Y271 337 aa10.18□□□□□ -0.78
MRPL49-208ENST00000533943 S100PP25815 95 aa10.17□□□□□ -0.78
MRPL49-208ENST00000533943 C2orf66Q6UXQ4 117 aa10.17□□□□□ -0.78
MRPL49-208ENST00000533943 Q6ZRU5 148 aa10.17□□□□□ -0.78
MRPL49-208ENST00000533943 STPG4Q8N801 248 aa10.17□□□□□ -0.78
MRPL49-208ENST00000533943 CAMK2N2Q96S95 79 aa10.17□□□□□ -0.78
MRPL49-208ENST00000533943 NPSP0C0P6 89 aa10.16□□□□□ -0.78
MRPL49-208ENST00000533943 SPAG11BQ08648 103 aa10.16□□□□□ -0.78
MRPL49-208ENST00000533943 GNB1LQ9BYB4 327 aa10.16□□□□□ -0.78
MRPL49-208ENST00000533943 CARHSP1Q9Y2V2 147 aaKnown RBP10.16□□□□□ -0.78
MRPL49-208ENST00000533943 LOC107984640A0A0U1RRK4 108 aa10.15□□□□□ -0.78
MRPL49-208ENST00000533943 F8WDY8 70 aa10.15□□□□□ -0.78
MRPL49-208ENST00000533943 KIAA1644Q3SXP7 199 aa10.15□□□□□ -0.78
MRPL49-208ENST00000533943 LINC00242Q5T6M2 205 aa10.15□□□□□ -0.78
MRPL49-208ENST00000533943 TEX43Q6ZNM6 134 aa10.15□□□□□ -0.78
MRPL49-208ENST00000533943 C7orf33Q8WU49 177 aa10.15□□□□□ -0.78
MRPL49-208ENST00000533943 TGIF2-C20orf24A0A0A6YYL0 155 aa10.14□□□□□ -0.79
MRPL49-208ENST00000533943 IGIPA6NJ69 53 aa10.14□□□□□ -0.79
MRPL49-208ENST00000533943 OXTP01178 125 aa10.14□□□□□ -0.79
MRPL49-208ENST00000533943 G0S2P27469 103 aa10.14□□□□□ -0.79
MRPL49-208ENST00000533943 HNRNPA3P51991 378 aaKnown RBP10.14□□□□□ -0.79
MRPL49-208ENST00000533943 PTTG1IPP53801 180 aa10.14□□□□□ -0.79
MRPL49-208ENST00000533943 RHEBQ15382 184 aa10.14□□□□□ -0.79
MRPL49-208ENST00000533943 RNF151Q2KHN1 245 aa10.14□□□□□ -0.79
MRPL49-208ENST00000533943 Q6ZN92 141 aa10.14□□□□□ -0.79
MRPL49-208ENST00000533943 ORAOV1Q8WV07 137 aa10.14□□□□□ -0.79
MRPL49-208ENST00000533943 A0A087WZ39 114 aa10.13□□□□□ -0.79
MRPL49-208ENST00000533943 UBE2D1P51668 147 aa10.13□□□□□ -0.79
MRPL49-208ENST00000533943 COX19Q49B96 90 aa10.13□□□□□ -0.79
MRPL49-208ENST00000533943 AMELXQ99217 191 aa10.13□□□□□ -0.79
MRPL49-208ENST00000533943 C2orf88Q9BSF0 95 aa10.13□□□□□ -0.79
MRPL49-208ENST00000533943 VCX2Q9H322 139 aa10.13□□□□□ -0.79
MRPL49-208ENST00000533943 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.12□□□□□ -0.79
MRPL49-208ENST00000533943 GAGE2BQ13066 116 aa10.12□□□□□ -0.79
MRPL49-208ENST00000533943 LINC00173Q6ZV60 143 aa10.12□□□□□ -0.79
MRPL49-208ENST00000533943 MRPL35Q9NZE8 188 aaKnown RBP10.12□□□□□ -0.79
MRPL49-208ENST00000533943 RPS10P5Q9NQ39 176 aa10.11□□□□□ -0.79
MRPL49-208ENST00000533943 MT-ND6P03923 174 aa10.1□□□□□ -0.79
MRPL49-208ENST00000533943 PAPPA-AS1Q5QFB9 102 aa10.1□□□□□ -0.79
MRPL49-208ENST00000533943 ZC2HC1BQ5TFG8 222 aa10.1□□□□□ -0.79
MRPL49-208ENST00000533943 LINC01561Q8N1V8 128 aa10.1□□□□□ -0.79
MRPL49-208ENST00000533943 TOMM6Q96B49 74 aa10.1□□□□□ -0.79
MRPL49-208ENST00000533943 ALKBH7Q9BT30 221 aaPredicted RBP10.1□□□□□ -0.79
MRPL49-208ENST00000533943 NDUFA1O15239 70 aa10.09□□□□□ -0.79
MRPL49-208ENST00000533943 KIAA0087Q14695 138 aa10.09□□□□□ -0.79
MRPL49-208ENST00000533943 FAM19A3Q7Z5A8 133 aa10.09□□□□□ -0.79
MRPL49-208ENST00000533943 TIMM17AQ99595 171 aa10.09□□□□□ -0.79
MRPL49-208ENST00000533943 A0A0J9YXV3 536 aa10.08□□□□□ -0.8
MRPL49-208ENST00000533943 LINC01546A6NGU7 62 aa10.08□□□□□ -0.8
MRPL49-208ENST00000533943 PRR3P79522 188 aaKnown RBP10.07□□□□□ -0.8
MRPL49-208ENST00000533943 RPL18AQ02543 176 aaKnown RBP10.07□□□□□ -0.8
MRPL49-208ENST00000533943 FABP9Q0Z7S8 132 aa10.07□□□□□ -0.8
MRPL49-208ENST00000533943 C10orf25Q5T742 122 aa10.07□□□□□ -0.8
MRPL49-208ENST00000533943 UNQ6190/PRO20217Q6UXQ8 127 aa10.07□□□□□ -0.8
MRPL49-208ENST00000533943 ERASQ7Z444 233 aa10.07□□□□□ -0.8
MRPL49-208ENST00000533943 MRPL18Q9H0U6 180 aaKnown RBP10.07□□□□□ -0.8
MRPL49-208ENST00000533943 A0A1W2PNN7 141 aa10.06□□□□□ -0.8
MRPL49-208ENST00000533943 LINC01549A6NIU2 74 aa10.06□□□□□ -0.8
MRPL49-208ENST00000533943 TLX1NBP0CAT3 122 aa10.06□□□□□ -0.8
MRPL49-208ENST00000533943 SEC11AP67812 179 aa10.06□□□□□ -0.8
MRPL49-208ENST00000533943 C6orf48Q9UBA6 75 aa10.06□□□□□ -0.8
MRPL49-208ENST00000533943 SCGB3A1Q96QR1 104 aa10.05□□□□□ -0.8
MRPL49-208ENST00000533943 APOC3P02656 99 aa10.04□□□□□ -0.8
MRPL49-208ENST00000533943 HERVK_113P63121 156 aa10.04□□□□□ -0.8
MRPL49-208ENST00000533943 NDUFA5Q16718 116 aa10.04□□□□□ -0.8
MRPL49-208ENST00000533943 C9orf116Q5BN46 136 aaPredicted RBP10.04□□□□□ -0.8
MRPL49-208ENST00000533943 TRBV30A0A0K0K1B3 111 aa10.03□□□□□ -0.8
MRPL49-208ENST00000533943 SNAPINO95295 136 aa10.03□□□□□ -0.8
MRPL49-208ENST00000533943 FA2HQ7L5A8 372 aa10.03□□□□□ -0.8
MRPL49-208ENST00000533943 SVBPQ8N300 66 aa10.03□□□□□ -0.8
MRPL49-208ENST00000533943 Q6ZRP5 223 aa10.02□□□□□ -0.81
MRPL49-208ENST00000533943 GEMIN7Q9H840 131 aaKnown RBP10.02□□□□□ -0.81
MRPL49-208ENST00000533943 SMCO4Q9NRQ5 59 aa10.02□□□□□ -0.81
MRPL49-208ENST00000533943 PRSS2P07478 247 aa10.01□□□□□ -0.81
MRPL49-208ENST00000533943 C2orf82Q6UX34 121 aa10.01□□□□□ -0.81
MRPL49-208ENST00000533943 PACRGQ96M98 296 aaPredicted RBP10.01□□□□□ -0.81
MRPL49-208ENST00000533943 CDKN2A-AS1Q9UH64 79 aa10.01□□□□□ -0.81
MRPL49-208ENST00000533943 TRAPPC1Q9Y5R8 145 aa10.01□□□□□ -0.81
MRPL49-208ENST00000533943 Q8IZM0 81 aa10□□□□□ -0.81
MRPL49-208ENST00000533943 C6orf226Q5I0X4 101 aa9.99□□□□□ -0.81
MRPL49-208ENST00000533943 CST9LQ9H4G1 147 aa9.99□□□□□ -0.81
MRPL49-208ENST00000533943 TOMM7Q9P0U1 55 aa9.99□□□□□ -0.81
MRPL49-208ENST00000533943 TINCRA0A1B0GVN0 87 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms