RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 CRYGAP11844 174 aa7.07□□□□□ -1.28
SVIP-205ENST00000533774 POLR2KP53803 58 aaKnown RBP7.07□□□□□ -1.28
SVIP-205ENST00000533774 LINC00299Q6ZSB3 139 aa7.07□□□□□ -1.28
SVIP-205ENST00000533774 OR10D4PQ8NGN7 298 aa7.07□□□□□ -1.28
SVIP-205ENST00000533774 FAM213BQ8TBF2 198 aa7.07□□□□□ -1.28
SVIP-205ENST00000533774 ORAOV1Q8WV07 137 aa7.07□□□□□ -1.28
SVIP-205ENST00000533774 C7orf77A4D0Y5 90 aa7.06□□□□□ -1.28
SVIP-205ENST00000533774 NDUFA1O15239 70 aa7.06□□□□□ -1.28
SVIP-205ENST00000533774 CCL20P78556 96 aa7.06□□□□□ -1.28
SVIP-205ENST00000533774 Q6ZUT4 128 aa7.06□□□□□ -1.28
SVIP-205ENST00000533774 LINC00173Q6ZV60 143 aa7.06□□□□□ -1.28
SVIP-205ENST00000533774 UBE2D4Q9Y2X8 147 aa7.06□□□□□ -1.28
SVIP-205ENST00000533774 FAM104AQ969W3 186 aa7.05□□□□□ -1.28
SVIP-205ENST00000533774 CTDSP1Q9GZU7 261 aa7.05□□□□□ -1.28
SVIP-205ENST00000533774 TEX261Q6UWH6 196 aa7.04□□□□□ -1.28
SVIP-205ENST00000533774 LINC00304Q8N9R0 145 aa7.04□□□□□ -1.28
SVIP-205ENST00000533774 PPDPFQ9H3Y8 114 aa7.04□□□□□ -1.28
SVIP-205ENST00000533774 ST20Q9HBF5 79 aa7.04□□□□□ -1.28
SVIP-205ENST00000533774 IGHV3OR16-9A0A0B4J2B5 98 aa7.03□□□□□ -1.28
SVIP-205ENST00000533774 TRBV27A0A0K0K1C4 114 aa7.03□□□□□ -1.28
SVIP-205ENST00000533774 F8WDY8 70 aa7.03□□□□□ -1.28
SVIP-205ENST00000533774 GIPP09681 153 aaPredicted RBP7.03□□□□□ -1.28
SVIP-205ENST00000533774 GNG4P50150 75 aa7.03□□□□□ -1.28
SVIP-205ENST00000533774 KIAA0087Q14695 138 aa7.03□□□□□ -1.28
SVIP-205ENST00000533774 TMEM241Q24JQ0 296 aa7.03□□□□□ -1.28
SVIP-205ENST00000533774 ASB16-AS1Q495Z4 193 aa7.03□□□□□ -1.28
SVIP-205ENST00000533774 CSDC2Q9Y534 153 aaKnown RBP7.03□□□□□ -1.28
SVIP-205ENST00000533774 ATP6V1G1O75348 118 aa7.02□□□□□ -1.29
SVIP-205ENST00000533774 LINC00242Q5T6M2 205 aa7.02□□□□□ -1.29
SVIP-205ENST00000533774 KRTAP9-7A8MTY7 169 aa7.01□□□□□ -1.29
SVIP-205ENST00000533774 NUPR1O60356 82 aa7.01□□□□□ -1.29
SVIP-205ENST00000533774 C2orf82Q6UX34 121 aa7.01□□□□□ -1.29
SVIP-205ENST00000533774 SMIM12Q96EX1 92 aa7.01□□□□□ -1.29
SVIP-205ENST00000533774 GNG13Q9P2W3 67 aa7.01□□□□□ -1.29
SVIP-205ENST00000533774 C22orf24Q9Y442 160 aa7.01□□□□□ -1.29
SVIP-205ENST00000533774 K7EN84 100 aa7□□□□□ -1.29
SVIP-205ENST00000533774 LCE3BQ5TA77 95 aa7□□□□□ -1.29
SVIP-205ENST00000533774 SMIM15Q7Z3B0 74 aa7□□□□□ -1.29
SVIP-205ENST00000533774 NDUFA13Q9P0J0 144 aa7□□□□□ -1.29
SVIP-205ENST00000533774 NDUFC2-KCTD14E9PQ53 114 aa6.99□□□□□ -1.29
SVIP-205ENST00000533774 ARPC5O15511 151 aa6.99□□□□□ -1.29
SVIP-205ENST00000533774 KRTAP19-2Q3LHN2 52 aa6.99□□□□□ -1.29
SVIP-205ENST00000533774 KRTAP23-1A1A580 65 aa6.98□□□□□ -1.29
SVIP-205ENST00000533774 UMAD1C9J7I0 102 aa6.98□□□□□ -1.29
SVIP-205ENST00000533774 SMKR1H3BMG3 65 aa6.98□□□□□ -1.29
SVIP-205ENST00000533774 BCE1O60756 84 aa6.98□□□□□ -1.29
SVIP-205ENST00000533774 RPL28P46779 137 aaKnown RBP6.98□□□□□ -1.29
SVIP-205ENST00000533774 MANBALQ9NQG1 85 aa6.98□□□□□ -1.29
SVIP-205ENST00000533774 KRTAP13-3Q3SY46 172 aa6.97□□□□□ -1.29
SVIP-205ENST00000533774 TIMM21Q9BVV7 248 aa6.97□□□□□ -1.29
SVIP-205ENST00000533774 TRBV30A0A0K0K1B3 111 aa6.96□□□□□ -1.3
SVIP-205ENST00000533774 VCYO14598 125 aa6.96□□□□□ -1.3
SVIP-205ENST00000533774 RAB4AP20338 218 aa6.96□□□□□ -1.3
SVIP-205ENST00000533774 FCER1GP30273 86 aa6.96□□□□□ -1.3
SVIP-205ENST00000533774 RPL39P62891 51 aaKnown RBP6.96□□□□□ -1.3
SVIP-205ENST00000533774 MT1HP80294 61 aa6.96□□□□□ -1.3
SVIP-205ENST00000533774 KRTAP13-1Q8IUC0 172 aa6.96□□□□□ -1.3
SVIP-205ENST00000533774 OCC1Q8TAD7 63 aa6.96□□□□□ -1.3
SVIP-205ENST00000533774 BIN3Q9NQY0 253 aa6.96□□□□□ -1.3
SVIP-205ENST00000533774 MED9Q9NWA0 146 aa6.96□□□□□ -1.3
SVIP-205ENST00000533774 FAM229BQ4G0N7 80 aa6.95□□□□□ -1.3
SVIP-205ENST00000533774 AMN1Q8IY45 258 aa6.95□□□□□ -1.3
SVIP-205ENST00000533774 NRACQ8N912 160 aa6.95□□□□□ -1.3
SVIP-205ENST00000533774 XAGE1AQ9HD64 81 aa6.95□□□□□ -1.3
SVIP-205ENST00000533774 BATF3Q9NR55 127 aa6.95□□□□□ -1.3
SVIP-205ENST00000533774 SMLR1H3BR10 107 aa6.94□□□□□ -1.3
SVIP-205ENST00000533774 KRTAP3-1Q9BYR8 98 aa6.94□□□□□ -1.3
SVIP-205ENST00000533774 TMEM191AQ9H0A3 160 aa6.94□□□□□ -1.3
SVIP-205ENST00000533774 CHTOPQ9Y3Y2 248 aaKnown RBP6.94□□□□□ -1.3
SVIP-205ENST00000533774 LBHQ53QV2 105 aaPredicted RBP6.93□□□□□ -1.3
SVIP-205ENST00000533774 PACRGQ96M98 296 aaPredicted RBP6.93□□□□□ -1.3
SVIP-205ENST00000533774 RPL37AP8A6NKH3 93 aa6.92□□□□□ -1.3
SVIP-205ENST00000533774 ZNF727A8MUV8 499 aa6.92□□□□□ -1.3
SVIP-205ENST00000533774 PDE6DO43924 150 aa6.92□□□□□ -1.3
SVIP-205ENST00000533774 SUMO2P61956 95 aaKnown RBP6.92□□□□□ -1.3
SVIP-205ENST00000533774 SMAGPQ0VAQ4 97 aa6.92□□□□□ -1.3
SVIP-205ENST00000533774 MRPL55Q7Z7F7 128 aaKnown RBP6.92□□□□□ -1.3
SVIP-205ENST00000533774 C3orf22Q8N5N4 141 aa6.92□□□□□ -1.3
SVIP-205ENST00000533774 LINC00337Q8N6G1 96 aa6.92□□□□□ -1.3
SVIP-205ENST00000533774 LINC00167Q96N53 147 aa6.92□□□□□ -1.3
SVIP-205ENST00000533774 IFITM10A6NMD0 228 aa6.91□□□□□ -1.3
SVIP-205ENST00000533774 GATCO43716 136 aaKnown RBP6.91□□□□□ -1.3
SVIP-205ENST00000533774 TP73-AS1Q9UF72 201 aa6.91□□□□□ -1.3
SVIP-205ENST00000533774 IGKV2D-26A0A0A0MRZ7 120 aa6.9□□□□□ -1.3
SVIP-205ENST00000533774 KRTAP10-6P60371 365 aaPredicted RBP6.9□□□□□ -1.3
SVIP-205ENST00000533774 SEC61BP60468 96 aaKnown RBP6.9□□□□□ -1.3
SVIP-205ENST00000533774 FP248Q71RG6 208 aaPredicted RBP6.9□□□□□ -1.3
SVIP-205ENST00000533774 KIR2DL4Q99706 377 aa6.9□□□□□ -1.3
SVIP-205ENST00000533774 TGIF2-C20orf24A0A0A6YYL0 155 aa6.89□□□□□ -1.31
SVIP-205ENST00000533774 A8MWL6 223 aa6.89□□□□□ -1.31
SVIP-205ENST00000533774 MRPS36P82909 103 aaKnown RBP6.89□□□□□ -1.31
SVIP-205ENST00000533774 A0A1B0GUT8 65 aa6.88□□□□□ -1.31
SVIP-205ENST00000533774 GAGE10A6NGK3 116 aa6.88□□□□□ -1.31
SVIP-205ENST00000533774 HBBP68871 147 aa6.88□□□□□ -1.31
SVIP-205ENST00000533774 ZNF345Q14585 488 aa6.88□□□□□ -1.31
SVIP-205ENST00000533774 TMEM18Q96B42 140 aa6.88□□□□□ -1.31
SVIP-205ENST00000533774 SPANXA1Q9NS26 97 aa6.88□□□□□ -1.31
SVIP-205ENST00000533774 HIGD1CA8MV81 97 aa6.87□□□□□ -1.31
SVIP-205ENST00000533774 FAM231DQ6ZW35 169 aa6.87□□□□□ -1.31
SVIP-205ENST00000533774 CFC1BP0CG36 223 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms