RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 MRPS36P82909 103 aaKnown RBP9.66□□□□□ -0.86
CPSF1-211ENST00000533492 SPAG11BQ08648 103 aa9.66□□□□□ -0.86
CPSF1-211ENST00000533492 PNRC1Q12796 327 aaPredicted RBP9.66□□□□□ -0.86
CPSF1-211ENST00000533492 IFI27P40305 119 aaPredicted RBP9.65□□□□□ -0.86
CPSF1-211ENST00000533492 OR10D4PQ8NGN7 298 aa9.65□□□□□ -0.86
CPSF1-211ENST00000533492 ANAPC16Q96DE5 110 aa9.65□□□□□ -0.86
CPSF1-211ENST00000533492 LOC389332A0A1B0GUA5 103 aa9.64□□□□□ -0.87
CPSF1-211ENST00000533492 MT1HL1P0DM35 61 aa9.64□□□□□ -0.87
CPSF1-211ENST00000533492 ORAOV1Q8WV07 137 aa9.64□□□□□ -0.87
CPSF1-211ENST00000533492 FAM104AQ969W3 186 aa9.64□□□□□ -0.87
CPSF1-211ENST00000533492 IGHV3OR16-9A0A0B4J2B5 98 aa9.63□□□□□ -0.87
CPSF1-211ENST00000533492 RPL18AQ02543 176 aaKnown RBP9.63□□□□□ -0.87
CPSF1-211ENST00000533492 Q6ZRP5 223 aa9.63□□□□□ -0.87
CPSF1-211ENST00000533492 MAP1LC3AQ9H492 121 aa9.63□□□□□ -0.87
CPSF1-211ENST00000533492 LAMTOR2Q9Y2Q5 125 aa9.63□□□□□ -0.87
CPSF1-211ENST00000533492 TGIF2-C20orf24A0A0A6YYL0 155 aa9.62□□□□□ -0.87
CPSF1-211ENST00000533492 A0A0J9YXV3 536 aa9.62□□□□□ -0.87
CPSF1-211ENST00000533492 F8WDY8 70 aa9.62□□□□□ -0.87
CPSF1-211ENST00000533492 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.62□□□□□ -0.87
CPSF1-211ENST00000533492 RNF151Q2KHN1 245 aa9.62□□□□□ -0.87
CPSF1-211ENST00000533492 PYGO1Q9Y3Y4 419 aa9.62□□□□□ -0.87
CPSF1-211ENST00000533492 A0A1W2PNN7 141 aa9.61□□□□□ -0.87
CPSF1-211ENST00000533492 PRSS47A8MTI9 375 aa9.6□□□□□ -0.87
CPSF1-211ENST00000533492 NDUFA1O15239 70 aa9.6□□□□□ -0.87
CPSF1-211ENST00000533492 C9orf116Q5BN46 136 aaPredicted RBP9.6□□□□□ -0.87
CPSF1-211ENST00000533492 SPINK6Q6UWN8 80 aa9.6□□□□□ -0.87
CPSF1-211ENST00000533492 TMEM141Q96I45 108 aa9.6□□□□□ -0.87
CPSF1-211ENST00000533492 IMMP2LQ96T52 175 aa9.6□□□□□ -0.87
CPSF1-211ENST00000533492 MRPL35Q9NZE8 188 aaKnown RBP9.6□□□□□ -0.87
CPSF1-211ENST00000533492 IGLV4-3A0A075B6K6 122 aa9.59□□□□□ -0.87
CPSF1-211ENST00000533492 REG3GQ6UW15 175 aa9.59□□□□□ -0.87
CPSF1-211ENST00000533492 TEX43Q6ZNM6 134 aa9.59□□□□□ -0.87
CPSF1-211ENST00000533492 Q8N8P6 123 aa9.59□□□□□ -0.87
CPSF1-211ENST00000533492 LINC00242Q5T6M2 205 aa9.58□□□□□ -0.88
CPSF1-211ENST00000533492 LINC01600Q96MT4 127 aa9.58□□□□□ -0.88
CPSF1-211ENST00000533492 C2orf88Q9BSF0 95 aa9.58□□□□□ -0.88
CPSF1-211ENST00000533492 CTDSP1Q9GZU7 261 aa9.58□□□□□ -0.88
CPSF1-211ENST00000533492 CYSLTR1Q9Y271 337 aa9.58□□□□□ -0.88
CPSF1-211ENST00000533492 A0A087WZ39 114 aa9.57□□□□□ -0.88
CPSF1-211ENST00000533492 ORMDL2Q53FV1 153 aa9.57□□□□□ -0.88
CPSF1-211ENST00000533492 CLLU1Q5K131 121 aa9.57□□□□□ -0.88
CPSF1-211ENST00000533492 C2orf66Q6UXQ4 117 aa9.57□□□□□ -0.88
CPSF1-211ENST00000533492 UNQ6190/PRO20217Q6UXQ8 127 aa9.57□□□□□ -0.88
CPSF1-211ENST00000533492 Q6ZN92 141 aa9.57□□□□□ -0.88
CPSF1-211ENST00000533492 SRSF9Q13242 221 aaKnown RBP eCLIP9.56□□□□□ -0.88
CPSF1-211ENST00000533492 C10orf25Q5T742 122 aa9.56□□□□□ -0.88
CPSF1-211ENST00000533492 VCX2Q9H322 139 aa9.56□□□□□ -0.88
CPSF1-211ENST00000533492 MT-ND6P03923 174 aa9.55□□□□□ -0.88
CPSF1-211ENST00000533492 PHF5AQ7RTV0 110 aaKnown RBP9.55□□□□□ -0.88
CPSF1-211ENST00000533492 K7EMI3 77 aa9.54□□□□□ -0.88
CPSF1-211ENST00000533492 TLX1NBP0CAT3 122 aa9.54□□□□□ -0.88
CPSF1-211ENST00000533492 UBE2D1P51668 147 aa9.54□□□□□ -0.88
CPSF1-211ENST00000533492 GAGE2EQ4V326 116 aa9.54□□□□□ -0.88
CPSF1-211ENST00000533492 NXT2Q9NPJ8 142 aaKnown RBP9.54□□□□□ -0.88
CPSF1-211ENST00000533492 C6orf48Q9UBA6 75 aa9.54□□□□□ -0.88
CPSF1-211ENST00000533492 GAGE2DQ9UEU5 116 aa9.54□□□□□ -0.88
CPSF1-211ENST00000533492 PSORS1C2Q9UIG4 136 aa9.54□□□□□ -0.88
CPSF1-211ENST00000533492 HMCN2Q8NDA2 5059 aa9.54□□□□□ -0.88
CPSF1-211ENST00000533492 G0S2P27469 103 aa9.53□□□□□ -0.88
CPSF1-211ENST00000533492 KIAA0087Q14695 138 aa9.53□□□□□ -0.88
CPSF1-211ENST00000533492 ZC2HC1BQ5TFG8 222 aa9.53□□□□□ -0.88
CPSF1-211ENST00000533492 PACRGQ96M98 296 aaPredicted RBP9.53□□□□□ -0.88
CPSF1-211ENST00000533492 C1orf137Q5JT78 98 aa9.52□□□□□ -0.89
CPSF1-211ENST00000533492 UQCC3Q6UW78 93 aa9.52□□□□□ -0.89
CPSF1-211ENST00000533492 LINC01561Q8N1V8 128 aa9.52□□□□□ -0.89
CPSF1-211ENST00000533492 AMELXQ99217 191 aa9.52□□□□□ -0.89
CPSF1-211ENST00000533492 TRBV30A0A0K0K1B3 111 aa9.51□□□□□ -0.89
CPSF1-211ENST00000533492 PRSS2P07478 247 aa9.51□□□□□ -0.89
CPSF1-211ENST00000533492 NPSP0C0P6 89 aa9.51□□□□□ -0.89
CPSF1-211ENST00000533492 KIAA1644Q3SXP7 199 aa9.51□□□□□ -0.89
CPSF1-211ENST00000533492 PAPPA-AS1Q5QFB9 102 aa9.51□□□□□ -0.89
CPSF1-211ENST00000533492 FAM168BA1KXE4 195 aa9.5□□□□□ -0.89
CPSF1-211ENST00000533492 TMEM218A2RU14 115 aa9.5□□□□□ -0.89
CPSF1-211ENST00000533492 IGIPA6NJ69 53 aa9.5□□□□□ -0.89
CPSF1-211ENST00000533492 C2orf82Q6UX34 121 aa9.5□□□□□ -0.89
CPSF1-211ENST00000533492 LINC00173Q6ZV60 143 aa9.5□□□□□ -0.89
CPSF1-211ENST00000533492 FAM19A5Q7Z5A7 132 aaPredicted RBP9.5□□□□□ -0.89
CPSF1-211ENST00000533492 TOMM7Q9P0U1 55 aa9.5□□□□□ -0.89
CPSF1-211ENST00000533492 KRTAP10-8P60410 259 aa9.49□□□□□ -0.89
CPSF1-211ENST00000533492 SEC11AP67812 179 aa9.49□□□□□ -0.89
CPSF1-211ENST00000533492 TRAV9-1A0A075B6T8 112 aa9.48□□□□□ -0.89
CPSF1-211ENST00000533492 ADCYAP1P18509 176 aa9.48□□□□□ -0.89
CPSF1-211ENST00000533492 S100PP25815 95 aa9.48□□□□□ -0.89
CPSF1-211ENST00000533492 CKS1BP61024 79 aa9.48□□□□□ -0.89
CPSF1-211ENST00000533492 C6orf226Q5I0X4 101 aa9.48□□□□□ -0.89
CPSF1-211ENST00000533492 NDUFC2-KCTD14E9PQ53 114 aa9.47□□□□□ -0.89
CPSF1-211ENST00000533492 HERVK_113P63121 156 aa9.47□□□□□ -0.89
CPSF1-211ENST00000533492 TIMM17AQ99595 171 aa9.47□□□□□ -0.89
CPSF1-211ENST00000533492 GEMIN7Q9H840 131 aaKnown RBP9.47□□□□□ -0.89
CPSF1-211ENST00000533492 FAM19A3Q7Z5A8 133 aa9.46□□□□□ -0.9
CPSF1-211ENST00000533492 TOMM6Q96B49 74 aa9.46□□□□□ -0.9
CPSF1-211ENST00000533492 SCGB3A1Q96QR1 104 aa9.46□□□□□ -0.9
CPSF1-211ENST00000533492 ALKBH7Q9BT30 221 aaPredicted RBP9.46□□□□□ -0.9
CPSF1-211ENST00000533492 SEC11CQ9BY50 192 aa9.46□□□□□ -0.9
CPSF1-211ENST00000533492 IGLV7-43P04211 117 aa9.45□□□□□ -0.9
CPSF1-211ENST00000533492 UBE2BP63146 152 aa9.45□□□□□ -0.9
CPSF1-211ENST00000533492 IFITM2Q01629 132 aa9.45□□□□□ -0.9
CPSF1-211ENST00000533492 ODF1Q14990 250 aa9.45□□□□□ -0.9
CPSF1-211ENST00000533492 Q8IZM0 81 aa9.45□□□□□ -0.9
CPSF1-211ENST00000533492 DIRC1Q969H9 104 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms