RNA–Protein interactions for RNA: ENST00000533341.2

GRAMD1B-209, Transcript of GRAM domain containing 1B, humanhuman

TSL 2 BASIC

Gene GRAMD1B, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-209ENST00000533341 PRR3P79522 188 aaKnown RBP12.37□□□□□ -0.43
GRAMD1B-209ENST00000533341 COX19Q49B96 90 aa12.37□□□□□ -0.43
GRAMD1B-209ENST00000533341 SMIM2Q9BVW6 85 aa12.37□□□□□ -0.43
GRAMD1B-209ENST00000533341 CSDC2Q9Y534 153 aaKnown RBP12.37□□□□□ -0.43
GRAMD1B-209ENST00000533341 IGLV4-69A0A075B6H9 119 aa12.36□□□□□ -0.43
GRAMD1B-209ENST00000533341 PRSS47A8MTI9 375 aa12.35□□□□□ -0.43
GRAMD1B-209ENST00000533341 RAB5AP20339 215 aa12.35□□□□□ -0.43
GRAMD1B-209ENST00000533341 GAGE2BQ13066 116 aa12.35□□□□□ -0.43
GRAMD1B-209ENST00000533341 CAMK2N2Q96S95 79 aa12.35□□□□□ -0.43
GRAMD1B-209ENST00000533341 LOC107984640A0A0U1RRK4 108 aa12.34□□□□□ -0.43
GRAMD1B-209ENST00000533341 APOMO95445 188 aa12.34□□□□□ -0.43
GRAMD1B-209ENST00000533341 NPYP01303 97 aa12.34□□□□□ -0.43
GRAMD1B-209ENST00000533341 SVBPQ8N300 66 aa12.34□□□□□ -0.43
GRAMD1B-209ENST00000533341 TIMM21Q9BVV7 248 aa12.34□□□□□ -0.43
GRAMD1B-209ENST00000533341 RPS10P5Q9NQ39 176 aa12.34□□□□□ -0.43
GRAMD1B-209ENST00000533341 SNAPINO95295 136 aa12.33□□□□□ -0.44
GRAMD1B-209ENST00000533341 Q6ZUT4 128 aa12.33□□□□□ -0.44
GRAMD1B-209ENST00000533341 C5orf38Q86SI9 138 aa12.33□□□□□ -0.44
GRAMD1B-209ENST00000533341 MAP1LC3AQ9H492 121 aa12.33□□□□□ -0.44
GRAMD1B-209ENST00000533341 K7EMI3 77 aa12.32□□□□□ -0.44
GRAMD1B-209ENST00000533341 PTTG1IPP53801 180 aa12.32□□□□□ -0.44
GRAMD1B-209ENST00000533341 GNB1LQ9BYB4 327 aa12.32□□□□□ -0.44
GRAMD1B-209ENST00000533341 APOC3P02656 99 aa12.3□□□□□ -0.44
GRAMD1B-209ENST00000533341 MT-ND6P03923 174 aa12.3□□□□□ -0.44
GRAMD1B-209ENST00000533341 G0S2P27469 103 aa12.3□□□□□ -0.44
GRAMD1B-209ENST00000533341 Q6ZRP5 223 aa12.3□□□□□ -0.44
GRAMD1B-209ENST00000533341 RPL39P62891 51 aaKnown RBP12.29□□□□□ -0.44
GRAMD1B-209ENST00000533341 SPINK6Q6UWN8 80 aa12.29□□□□□ -0.44
GRAMD1B-209ENST00000533341 C2orf48Q96LS8 159 aa12.29□□□□□ -0.44
GRAMD1B-209ENST00000533341 NXT2Q9NPJ8 142 aaKnown RBP12.29□□□□□ -0.44
GRAMD1B-209ENST00000533341 SPANXA1Q9NS26 97 aa12.29□□□□□ -0.44
GRAMD1B-209ENST00000533341 RPL18AQ02543 176 aaKnown RBP12.28□□□□□ -0.44
GRAMD1B-209ENST00000533341 SPAG11BQ08648 103 aa12.28□□□□□ -0.44
GRAMD1B-209ENST00000533341 REG3GQ6UW15 175 aa12.28□□□□□ -0.44
GRAMD1B-209ENST00000533341 LINC01600Q96MT4 127 aa12.28□□□□□ -0.44
GRAMD1B-209ENST00000533341 Q8N8P6 123 aa12.27□□□□□ -0.45
GRAMD1B-209ENST00000533341 UBR4Q5T4S7 5183 aa12.27□□□□□ -0.45
GRAMD1B-209ENST00000533341 ORMDL2Q53FV1 153 aa12.26□□□□□ -0.45
GRAMD1B-209ENST00000533341 LOC389332A0A1B0GUA5 103 aa12.25□□□□□ -0.45
GRAMD1B-209ENST00000533341 MRPS36P82909 103 aaKnown RBP12.25□□□□□ -0.45
GRAMD1B-209ENST00000533341 ORAOV1Q8WV07 137 aa12.25□□□□□ -0.45
GRAMD1B-209ENST00000533341 OPRPNQ99935 248 aaPredicted RBP12.25□□□□□ -0.45
GRAMD1B-209ENST00000533341 A0A0J9YXV3 536 aa12.24□□□□□ -0.45
GRAMD1B-209ENST00000533341 A0A1W2PNN7 141 aa12.24□□□□□ -0.45
GRAMD1B-209ENST00000533341 IFITM10A6NMD0 228 aa12.24□□□□□ -0.45
GRAMD1B-209ENST00000533341 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.24□□□□□ -0.45
GRAMD1B-209ENST00000533341 OR10D4PQ8NGN7 298 aa12.24□□□□□ -0.45
GRAMD1B-209ENST00000533341 PYGO1Q9Y3Y4 419 aa12.24□□□□□ -0.45
GRAMD1B-209ENST00000533341 IFI27P40305 119 aaPredicted RBP12.23□□□□□ -0.45
GRAMD1B-209ENST00000533341 C9orf116Q5BN46 136 aaPredicted RBP12.23□□□□□ -0.45
GRAMD1B-209ENST00000533341 LINC01549A6NIU2 74 aa12.22□□□□□ -0.45
GRAMD1B-209ENST00000533341 NPSP0C0P6 89 aa12.22□□□□□ -0.45
GRAMD1B-209ENST00000533341 CYSLTR1Q9Y271 337 aa12.22□□□□□ -0.45
GRAMD1B-209ENST00000533341 FABP9Q0Z7S8 132 aa12.21□□□□□ -0.45
GRAMD1B-209ENST00000533341 RNF151Q2KHN1 245 aa12.21□□□□□ -0.45
GRAMD1B-209ENST00000533341 NDUFA1O15239 70 aa12.2□□□□□ -0.46
GRAMD1B-209ENST00000533341 SRSF9Q13242 221 aaKnown RBP eCLIP12.2□□□□□ -0.46
GRAMD1B-209ENST00000533341 KIAA1644Q3SXP7 199 aa12.2□□□□□ -0.46
GRAMD1B-209ENST00000533341 TGIF2-C20orf24A0A0A6YYL0 155 aa12.19□□□□□ -0.46
GRAMD1B-209ENST00000533341 IGHV3OR16-9A0A0B4J2B5 98 aa12.19□□□□□ -0.46
GRAMD1B-209ENST00000533341 F8WDY8 70 aa12.19□□□□□ -0.46
GRAMD1B-209ENST00000533341 PAPPA-AS1Q5QFB9 102 aa12.19□□□□□ -0.46
GRAMD1B-209ENST00000533341 MRPL18Q9H0U6 180 aaKnown RBP12.19□□□□□ -0.46
GRAMD1B-209ENST00000533341 MRPL35Q9NZE8 188 aaKnown RBP12.19□□□□□ -0.46
GRAMD1B-209ENST00000533341 TNXBP22105 4242 aa12.19□□□□□ -0.46
GRAMD1B-209ENST00000533341 Q6ZN92 141 aa12.18□□□□□ -0.46
GRAMD1B-209ENST00000533341 PHF5AQ7RTV0 110 aaKnown RBP12.18□□□□□ -0.46
GRAMD1B-209ENST00000533341 FAM104AQ969W3 186 aa12.18□□□□□ -0.46
GRAMD1B-209ENST00000533341 ALKBH7Q9BT30 221 aaPredicted RBP12.18□□□□□ -0.46
GRAMD1B-209ENST00000533341 C2orf66Q6UXQ4 117 aa12.17□□□□□ -0.46
GRAMD1B-209ENST00000533341 TMEM141Q96I45 108 aa12.17□□□□□ -0.46
GRAMD1B-209ENST00000533341 PSORS1C2Q9UIG4 136 aa12.17□□□□□ -0.46
GRAMD1B-209ENST00000533341 TRAPPC1Q9Y5R8 145 aa12.17□□□□□ -0.46
GRAMD1B-209ENST00000533341 C1orf137Q5JT78 98 aa12.16□□□□□ -0.46
GRAMD1B-209ENST00000533341 KRTAP10-8P60410 259 aa12.15□□□□□ -0.46
GRAMD1B-209ENST00000533341 ODF1Q14990 250 aa12.15□□□□□ -0.46
GRAMD1B-209ENST00000533341 UNQ6190/PRO20217Q6UXQ8 127 aa12.15□□□□□ -0.46
GRAMD1B-209ENST00000533341 C2orf88Q9BSF0 95 aa12.15□□□□□ -0.46
GRAMD1B-209ENST00000533341 C10orf25Q5T742 122 aa12.14□□□□□ -0.47
GRAMD1B-209ENST00000533341 TEX43Q6ZNM6 134 aa12.14□□□□□ -0.47
GRAMD1B-209ENST00000533341 VCX2Q9H322 139 aa12.14□□□□□ -0.47
GRAMD1B-209ENST00000533341 SMCO4Q9NRQ5 59 aa12.14□□□□□ -0.47
GRAMD1B-209ENST00000533341 IGLV4-3A0A075B6K6 122 aa12.13□□□□□ -0.47
GRAMD1B-209ENST00000533341 GAGE2EQ4V326 116 aa12.13□□□□□ -0.47
GRAMD1B-209ENST00000533341 FA2HQ7L5A8 372 aa12.13□□□□□ -0.47
GRAMD1B-209ENST00000533341 GAGE2DQ9UEU5 116 aa12.13□□□□□ -0.47
GRAMD1B-209ENST00000533341 A0A087WZ39 114 aa12.12□□□□□ -0.47
GRAMD1B-209ENST00000533341 LINC01546A6NGU7 62 aa12.12□□□□□ -0.47
GRAMD1B-209ENST00000533341 LINC00242Q5T6M2 205 aa12.12□□□□□ -0.47
GRAMD1B-209ENST00000533341 TOMM6Q96B49 74 aa12.12□□□□□ -0.47
GRAMD1B-209ENST00000533341 C6orf48Q9UBA6 75 aa12.12□□□□□ -0.47
GRAMD1B-209ENST00000533341 FAM19A5Q7Z5A7 132 aaPredicted RBP12.11□□□□□ -0.47
GRAMD1B-209ENST00000533341 SLC7A5P1Q8MH63 180 aa12.11□□□□□ -0.47
GRAMD1B-209ENST00000533341 TIMM17AQ99595 171 aa12.11□□□□□ -0.47
GRAMD1B-209ENST00000533341 FAM168BA1KXE4 195 aa12.1□□□□□ -0.47
GRAMD1B-209ENST00000533341 IGIPA6NJ69 53 aa12.1□□□□□ -0.47
GRAMD1B-209ENST00000533341 TLX1NBP0CAT3 122 aa12.1□□□□□ -0.47
GRAMD1B-209ENST00000533341 RAB5BP61020 215 aa12.1□□□□□ -0.47
GRAMD1B-209ENST00000533341 SEC11AP67812 179 aa12.1□□□□□ -0.47
GRAMD1B-209ENST00000533341 ERASQ7Z444 233 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms