RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 COX7BP24311 80 aa5.68□□□□□ -1.5
CTNND1-230ENST00000532245 FOXI1Q12951 378 aa5.68□□□□□ -1.5
CTNND1-230ENST00000532245 COA6Q5JTJ3 125 aaKnown RBP5.68□□□□□ -1.5
CTNND1-230ENST00000532245 POLR2KP53803 58 aaKnown RBP5.67□□□□□ -1.5
CTNND1-230ENST00000532245 LOC107984640A0A0U1RRK4 108 aa5.67□□□□□ -1.5
CTNND1-230ENST00000532245 FUSP35637 526 aaKnown RBP eCLIP5.67□□□□□ -1.5
CTNND1-230ENST00000532245 Q6ZSN1 163 aa5.67□□□□□ -1.5
CTNND1-230ENST00000532245 C9orf118A6NHY6 69 aa5.67□□□□□ -1.5
CTNND1-230ENST00000532245 USP24Q9UPU5 2620 aa5.67□□□□□ -1.5
CTNND1-230ENST00000532245 H0YGX0 51 aa5.67□□□□□ -1.5
CTNND1-230ENST00000532245 A0A0J9YXY3 114 aa5.66□□□□□ -1.5
CTNND1-230ENST00000532245 UBE2D1P51668 147 aa5.66□□□□□ -1.5
CTNND1-230ENST00000532245 SPATA3Q8NHX4 192 aa5.66□□□□□ -1.5
CTNND1-230ENST00000532245 UBL5Q9BZL1 73 aa5.66□□□□□ -1.5
CTNND1-230ENST00000532245 XIRP2A4UGR9 3374 aa5.66□□□□□ -1.5
CTNND1-230ENST00000532245 PYGO1Q9Y3Y4 419 aa5.66□□□□□ -1.5
CTNND1-230ENST00000532245 CDC42SE2Q9NRR3 84 aa5.66□□□□□ -1.5
CTNND1-230ENST00000532245 IGLV4-60A0A075B6I1 120 aa5.66□□□□□ -1.5
CTNND1-230ENST00000532245 MUC7Q8TAX7 377 aa5.66□□□□□ -1.5
CTNND1-230ENST00000532245 TMEM223A0PJW6 202 aa5.65□□□□□ -1.5
CTNND1-230ENST00000532245 RPL37AP8A6NKH3 93 aa5.65□□□□□ -1.5
CTNND1-230ENST00000532245 MGAM2Q2M2H8 2515 aa5.65□□□□□ -1.5
CTNND1-230ENST00000532245 USP17L23D6RBM5 183 aa5.65□□□□□ -1.5
CTNND1-230ENST00000532245 H3BMG7 143 aa5.65□□□□□ -1.5
CTNND1-230ENST00000532245 CDPF1Q6NVV7 123 aa5.65□□□□□ -1.5
CTNND1-230ENST00000532245 KRTAP10-3P60369 221 aa5.65□□□□□ -1.5
CTNND1-230ENST00000532245 WFDC9Q8NEX5 89 aa5.65□□□□□ -1.5
CTNND1-230ENST00000532245 WWC2-AS2Q96NR7 200 aa5.65□□□□□ -1.5
CTNND1-230ENST00000532245 CENPEQ02224 2701 aa5.65□□□□□ -1.51
CTNND1-230ENST00000532245 LINC00694P0DN24 101 aa5.65□□□□□ -1.51
CTNND1-230ENST00000532245 FLNAP21333 2647 aaKnown RBP5.65□□□□□ -1.51
CTNND1-230ENST00000532245 KRTAP1-1Q07627 177 aa5.65□□□□□ -1.51
CTNND1-230ENST00000532245 CYSRT1A8MQ03 144 aa5.64□□□□□ -1.51
CTNND1-230ENST00000532245 IBA57-AS1B1ANH7 110 aa5.64□□□□□ -1.51
CTNND1-230ENST00000532245 CHCHD7Q9BUK0 85 aa5.64□□□□□ -1.51
CTNND1-230ENST00000532245 PPDPFQ9H3Y8 114 aa5.64□□□□□ -1.51
CTNND1-230ENST00000532245 SPANXCQ9NY87 97 aa5.64□□□□□ -1.51
CTNND1-230ENST00000532245 ITPR3Q14573 2671 aa5.64□□□□□ -1.51
CTNND1-230ENST00000532245 LINC00474Q9P2X8 69 aa5.64□□□□□ -1.51
CTNND1-230ENST00000532245 SZT2Q5T011 3432 aa5.64□□□□□ -1.51
CTNND1-230ENST00000532245 KRTAP10-11P60412 298 aa5.64□□□□□ -1.51
CTNND1-230ENST00000532245 A0A1W2PPM0 123 aa5.63□□□□□ -1.51
CTNND1-230ENST00000532245 FXYD2P54710 66 aa5.63□□□□□ -1.51
CTNND1-230ENST00000532245 CNFNQ9BYD5 112 aa5.63□□□□□ -1.51
CTNND1-230ENST00000532245 MGAQ8IWI9 3026 aa5.63□□□□□ -1.51
CTNND1-230ENST00000532245 TRACP01848 142 aa5.63□□□□□ -1.51
CTNND1-230ENST00000532245 MRPS36P82909 103 aaKnown RBP5.63□□□□□ -1.51
CTNND1-230ENST00000532245 K7EIL1 84 aa5.63□□□□□ -1.51
CTNND1-230ENST00000532245 CLEC2BQ92478 149 aa5.63□□□□□ -1.51
CTNND1-230ENST00000532245 WDFY4Q6ZS81 3184 aa5.63□□□□□ -1.51
CTNND1-230ENST00000532245 POM121L12Q8N7R1 296 aa5.63□□□□□ -1.51
CTNND1-230ENST00000532245 X6R8D5 127 aa5.63□□□□□ -1.51
CTNND1-230ENST00000532245 C6orf223Q8N319 242 aa5.63□□□□□ -1.51
CTNND1-230ENST00000532245 ANAPC13Q9BS18 74 aa5.63□□□□□ -1.51
CTNND1-230ENST00000532245 AGRNO00468 2067 aa5.62□□□□□ -1.51
CTNND1-230ENST00000532245 UNQ6190/PRO20217Q6UXQ8 127 aa5.62□□□□□ -1.51
CTNND1-230ENST00000532245 ETDBQ3ZM63 59 aa5.62□□□□□ -1.51
CTNND1-230ENST00000532245 C11orf72Q8NBR9 251 aa5.62□□□□□ -1.51
CTNND1-230ENST00000532245 ESRGQ1W209 222 aa5.62□□□□□ -1.51
CTNND1-230ENST00000532245 ANKRD29Q8N6D5 301 aa5.62□□□□□ -1.51
CTNND1-230ENST00000532245 PLAC8L1A1L4L8 177 aa5.61□□□□□ -1.51
CTNND1-230ENST00000532245 UBE2V1Q13404 147 aa5.61□□□□□ -1.51
CTNND1-230ENST00000532245 NTN5Q8WTR8 489 aaPredicted RBP5.61□□□□□ -1.51
CTNND1-230ENST00000532245 NDUFB1O75438 58 aa5.61□□□□□ -1.51
CTNND1-230ENST00000532245 NPSP0C0P6 89 aa5.61□□□□□ -1.51
CTNND1-230ENST00000532245 PCP4P48539 62 aa5.61□□□□□ -1.51
CTNND1-230ENST00000532245 C9orf116Q5BN46 136 aaPredicted RBP5.61□□□□□ -1.51
CTNND1-230ENST00000532245 MRPL52Q86TS9 123 aaKnown RBP5.61□□□□□ -1.51
CTNND1-230ENST00000532245 SPANXDQ9BXN6 97 aa5.61□□□□□ -1.51
CTNND1-230ENST00000532245 LINC00308Q8TCZ7 52 aa5.61□□□□□ -1.51
CTNND1-230ENST00000532245 COX6A2Q02221 97 aa5.6□□□□□ -1.51
CTNND1-230ENST00000532245 SPATA12Q7Z6I5 190 aa5.6□□□□□ -1.51
CTNND1-230ENST00000532245 SPANXB1Q9NS25 103 aaPredicted RBP5.6□□□□□ -1.51
CTNND1-230ENST00000532245 M0QXV9 152 aa5.6□□□□□ -1.51
CTNND1-230ENST00000532245 LINC00242Q5T6M2 205 aa5.6□□□□□ -1.51
CTNND1-230ENST00000532245 K7EP34 96 aa5.6□□□□□ -1.51
CTNND1-230ENST00000532245 C5orf47Q569G3 176 aa5.6□□□□□ -1.51
CTNND1-230ENST00000532245 Q8IZM0 81 aa5.59□□□□□ -1.51
CTNND1-230ENST00000532245 HIGD1BQ9P298 99 aa5.59□□□□□ -1.51
CTNND1-230ENST00000532245 TRAV23DV6A0A075B6W5 121 aa5.59□□□□□ -1.51
CTNND1-230ENST00000532245 M0R378 163 aa5.59□□□□□ -1.51
CTNND1-230ENST00000532245 HRCT1Q6UXD1 115 aa5.59□□□□□ -1.51
CTNND1-230ENST00000532245 H0Y9J4 135 aa5.59□□□□□ -1.52
CTNND1-230ENST00000532245 DLEU1O43261 78 aa5.59□□□□□ -1.52
CTNND1-230ENST00000532245 C6orf99Q4VX62 202 aa5.59□□□□□ -1.52
CTNND1-230ENST00000532245 Q8NAQ8 132 aa5.59□□□□□ -1.52
CTNND1-230ENST00000532245 SIGMAR1Q99720 223 aa5.59□□□□□ -1.52
CTNND1-230ENST00000532245 ATRQ13535 2644 aa5.59□□□□□ -1.52
CTNND1-230ENST00000532245 NREPQ16612 68 aa5.58□□□□□ -1.52
CTNND1-230ENST00000532245 COX8CQ7Z4L0 72 aa5.58□□□□□ -1.52
CTNND1-230ENST00000532245 PPDPFLQ8WWR9 84 aa5.58□□□□□ -1.52
CTNND1-230ENST00000532245 AKAP13Q12802 2813 aa5.58□□□□□ -1.52
CTNND1-230ENST00000532245 IGKV2D-26A0A0A0MRZ7 120 aa5.58□□□□□ -1.52
CTNND1-230ENST00000532245 F8W1H4 67 aa5.58□□□□□ -1.52
CTNND1-230ENST00000532245 IGLV9-49A0A0B4J1Y8 123 aa5.57□□□□□ -1.52
CTNND1-230ENST00000532245 IGIPA6NJ69 53 aa5.57□□□□□ -1.52
CTNND1-230ENST00000532245 RBM3P98179 157 aaKnown RBP5.57□□□□□ -1.52
CTNND1-230ENST00000532245 MAPKAPK5-AS1Q8N8E1 139 aa5.57□□□□□ -1.52
CTNND1-230ENST00000532245 SVIPQ8NHG7 77 aa5.57□□□□□ -1.52
CTNND1-230ENST00000532245 SLPIP03973 132 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms