RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 KIR2DL4Q99706 377 aa5.42□□□□□ -1.54
USF1-210ENST00000531842 LINC00862A6NCI5 91 aa5.41□□□□□ -1.54
USF1-210ENST00000531842 APOMO95445 188 aa5.41□□□□□ -1.54
USF1-210ENST00000531842 RPL32P62910 135 aaKnown RBP5.41□□□□□ -1.54
USF1-210ENST00000531842 HBBP68871 147 aa5.41□□□□□ -1.54
USF1-210ENST00000531842 RPL18AQ02543 176 aaKnown RBP5.41□□□□□ -1.54
USF1-210ENST00000531842 C5orf38Q86SI9 138 aa5.41□□□□□ -1.54
USF1-210ENST00000531842 TMEM18Q96B42 140 aa5.41□□□□□ -1.54
USF1-210ENST00000531842 UBE2D4Q9Y2X8 147 aa5.41□□□□□ -1.54
USF1-210ENST00000531842 A0A1B0GW15 77 aa5.4□□□□□ -1.54
USF1-210ENST00000531842 TMEM218A2RU14 115 aa5.4□□□□□ -1.54
USF1-210ENST00000531842 CKS2P33552 79 aa5.4□□□□□ -1.54
USF1-210ENST00000531842 RAB14P61106 215 aa5.4□□□□□ -1.54
USF1-210ENST00000531842 RPL39P62891 51 aaKnown RBP5.4□□□□□ -1.54
USF1-210ENST00000531842 C9orf116Q5BN46 136 aaPredicted RBP5.4□□□□□ -1.54
USF1-210ENST00000531842 OPRPNQ99935 248 aaPredicted RBP5.4□□□□□ -1.54
USF1-210ENST00000531842 C20orf78Q9BR46 151 aa5.4□□□□□ -1.54
USF1-210ENST00000531842 PPP1R2P9O14990 202 aa5.39□□□□□ -1.55
USF1-210ENST00000531842 KRTAP1-4P0C5Y4 121 aa5.39□□□□□ -1.55
USF1-210ENST00000531842 SPAG11BQ08648 103 aa5.39□□□□□ -1.55
USF1-210ENST00000531842 PNRC1Q12796 327 aaPredicted RBP5.39□□□□□ -1.55
USF1-210ENST00000531842 ATP5L2Q7Z4Y8 100 aa5.39□□□□□ -1.55
USF1-210ENST00000531842 C2orf48Q96LS8 159 aa5.39□□□□□ -1.55
USF1-210ENST00000531842 SMIM2Q9BVW6 85 aa5.39□□□□□ -1.55
USF1-210ENST00000531842 CSDC2Q9Y534 153 aaKnown RBP5.39□□□□□ -1.55
USF1-210ENST00000531842 FAM168BA1KXE4 195 aa5.38□□□□□ -1.55
USF1-210ENST00000531842 PRSS47A8MTI9 375 aa5.38□□□□□ -1.55
USF1-210ENST00000531842 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.38□□□□□ -1.55
USF1-210ENST00000531842 TCAPO15273 167 aa5.38□□□□□ -1.55
USF1-210ENST00000531842 TSPAN13O95857 204 aa5.38□□□□□ -1.55
USF1-210ENST00000531842 Q6ZUT4 128 aa5.38□□□□□ -1.55
USF1-210ENST00000531842 ANAPC16Q96DE5 110 aa5.38□□□□□ -1.55
USF1-210ENST00000531842 MT-ND4LP03901 98 aa5.37□□□□□ -1.55
USF1-210ENST00000531842 IGLV7-43P04211 117 aa5.37□□□□□ -1.55
USF1-210ENST00000531842 C10orf91Q5T1B1 145 aa5.37□□□□□ -1.55
USF1-210ENST00000531842 UQCC3Q6UW78 93 aa5.37□□□□□ -1.55
USF1-210ENST00000531842 TMEM136Q6ZRR5 245 aa5.37□□□□□ -1.55
USF1-210ENST00000531842 ORAOV1Q8WV07 137 aa5.37□□□□□ -1.55
USF1-210ENST00000531842 TIMM21Q9BVV7 248 aa5.37□□□□□ -1.55
USF1-210ENST00000531842 A0A087WZ39 114 aa5.36□□□□□ -1.55
USF1-210ENST00000531842 A0A0U1RQV1 116 aa5.36□□□□□ -1.55
USF1-210ENST00000531842 F8W036 122 aa5.36□□□□□ -1.55
USF1-210ENST00000531842 H0Y9J4 135 aa5.36□□□□□ -1.55
USF1-210ENST00000531842 RNF151Q2KHN1 245 aa5.36□□□□□ -1.55
USF1-210ENST00000531842 COMMD7Q86VX2 200 aa5.36□□□□□ -1.55
USF1-210ENST00000531842 ORMDL3Q8N138 153 aa5.36□□□□□ -1.55
USF1-210ENST00000531842 OR10D4PQ8NGN7 298 aa5.36□□□□□ -1.55
USF1-210ENST00000531842 PRELID3AQ96N28 172 aa5.36□□□□□ -1.55
USF1-210ENST00000531842 IMMP2LQ96T52 175 aa5.36□□□□□ -1.55
USF1-210ENST00000531842 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
USF1-210ENST00000531842 IFITM10A6NMD0 228 aa5.35□□□□□ -1.55
USF1-210ENST00000531842 NDUFA1O15239 70 aa5.35□□□□□ -1.55
USF1-210ENST00000531842 PPBPP02775 128 aa5.35□□□□□ -1.55
USF1-210ENST00000531842 S100A8P05109 93 aa5.35□□□□□ -1.55
USF1-210ENST00000531842 GAGE2EQ4V326 116 aa5.35□□□□□ -1.55
USF1-210ENST00000531842 DIRC1Q969H9 104 aa5.35□□□□□ -1.55
USF1-210ENST00000531842 SEC11CQ9BY50 192 aa5.35□□□□□ -1.55
USF1-210ENST00000531842 SPANXA1Q9NS26 97 aa5.35□□□□□ -1.55
USF1-210ENST00000531842 MRPL35Q9NZE8 188 aaKnown RBP5.35□□□□□ -1.55
USF1-210ENST00000531842 GAGE2DQ9UEU5 116 aa5.35□□□□□ -1.55
USF1-210ENST00000531842 LOC389332A0A1B0GUA5 103 aa5.34□□□□□ -1.55
USF1-210ENST00000531842 F8WDY8 70 aa5.34□□□□□ -1.55
USF1-210ENST00000531842 MRPS36P82909 103 aaKnown RBP5.34□□□□□ -1.55
USF1-210ENST00000531842 KIAA1644Q3SXP7 199 aa5.34□□□□□ -1.55
USF1-210ENST00000531842 ZC2HC1BQ5TFG8 222 aa5.34□□□□□ -1.55
USF1-210ENST00000531842 UNQ6190/PRO20217Q6UXQ8 127 aa5.34□□□□□ -1.55
USF1-210ENST00000531842 FAM19A5Q7Z5A7 132 aaPredicted RBP5.34□□□□□ -1.55
USF1-210ENST00000531842 IGLV4-3A0A075B6K6 122 aa5.33□□□□□ -1.56
USF1-210ENST00000531842 TGIF2-C20orf24A0A0A6YYL0 155 aa5.33□□□□□ -1.56
USF1-210ENST00000531842 IGHV3OR16-9A0A0B4J2B5 98 aa5.33□□□□□ -1.56
USF1-210ENST00000531842 RAB5AP20339 215 aa5.33□□□□□ -1.56
USF1-210ENST00000531842 UBE2BP63146 152 aa5.33□□□□□ -1.56
USF1-210ENST00000531842 C10orf25Q5T742 122 aa5.33□□□□□ -1.56
USF1-210ENST00000531842 LINC00173Q6ZV60 143 aa5.33□□□□□ -1.56
USF1-210ENST00000531842 KRTAP7-1Q8IUC3 87 aa5.33□□□□□ -1.56
USF1-210ENST00000531842 CTDSP1Q9GZU7 261 aa5.33□□□□□ -1.56
USF1-210ENST00000531842 CARHSP1Q9Y2V2 147 aaKnown RBP5.33□□□□□ -1.56
USF1-210ENST00000531842 IFI27P40305 119 aaPredicted RBP5.32□□□□□ -1.56
USF1-210ENST00000531842 Q8N8P6 123 aa5.32□□□□□ -1.56
USF1-210ENST00000531842 RETNLBQ9BQ08 111 aa5.32□□□□□ -1.56
USF1-210ENST00000531842 LAMTOR2Q9Y2Q5 125 aa5.32□□□□□ -1.56
USF1-210ENST00000531842 IGLV1-50A0A075B6I6 118 aa5.31□□□□□ -1.56
USF1-210ENST00000531842 IGIPA6NJ69 53 aa5.31□□□□□ -1.56
USF1-210ENST00000531842 UBE2D1P51668 147 aa5.31□□□□□ -1.56
USF1-210ENST00000531842 LINC00242Q5T6M2 205 aa5.31□□□□□ -1.56
USF1-210ENST00000531842 PACRGQ96M98 296 aaPredicted RBP5.31□□□□□ -1.56
USF1-210ENST00000531842 C6orf48Q9UBA6 75 aa5.31□□□□□ -1.56
USF1-210ENST00000531842 PYGO1Q9Y3Y4 419 aa5.31□□□□□ -1.56
USF1-210ENST00000531842 FSIP2Q5CZC0 6907 aa5.31□□□□□ -1.56
USF1-210ENST00000531842 TRAV9-1A0A075B6T8 112 aa5.3□□□□□ -1.56
USF1-210ENST00000531842 LINC01546A6NGU7 62 aa5.3□□□□□ -1.56
USF1-210ENST00000531842 M0QXV9 152 aa5.3□□□□□ -1.56
USF1-210ENST00000531842 TLX1NBP0CAT3 122 aa5.3□□□□□ -1.56
USF1-210ENST00000531842 KIAA0087Q14695 138 aa5.3□□□□□ -1.56
USF1-210ENST00000531842 C2orf66Q6UXQ4 117 aa5.3□□□□□ -1.56
USF1-210ENST00000531842 AMELXQ99217 191 aa5.3□□□□□ -1.56
USF1-210ENST00000531842 ALKBH7Q9BT30 221 aaPredicted RBP5.3□□□□□ -1.56
USF1-210ENST00000531842 MAP1LC3AQ9H492 121 aa5.3□□□□□ -1.56
USF1-210ENST00000531842 PRSS2P07478 247 aa5.29□□□□□ -1.56
USF1-210ENST00000531842 C2orf82Q6UX34 121 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms