RNA–Protein interactions for RNA: ENST00000531613.1

PCDHA8-202, Transcript of protocadherin alpha 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA8, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8-202ENST00000531613 UBE2D3P61077 147 aa12.73□□□□□ -0.37
PCDHA8-202ENST00000531613 UBE2D2P62837 147 aa12.73□□□□□ -0.37
PCDHA8-202ENST00000531613 YPEL4Q96NS1 127 aa12.73□□□□□ -0.37
PCDHA8-202ENST00000531613 CASC2Q6XLA1 102 aa12.73□□□□□ -0.37
PCDHA8-202ENST00000531613 USP17L23D6RBM5 183 aa12.73□□□□□ -0.37
PCDHA8-202ENST00000531613 NANOS2P60321 138 aaKnown RBP12.73□□□□□ -0.37
PCDHA8-202ENST00000531613 A0A0J9YWU9 116 aa12.72□□□□□ -0.37
PCDHA8-202ENST00000531613 LY6G6CO95867 125 aa12.72□□□□□ -0.37
PCDHA8-202ENST00000531613 CEP295Q9C0D2 2601 aa12.72□□□□□ -0.37
PCDHA8-202ENST00000531613 LOC107984640A0A0U1RRK4 108 aa12.72□□□□□ -0.37
PCDHA8-202ENST00000531613 DHRS4-AS1Q9P1J3 65 aa12.72□□□□□ -0.37
PCDHA8-202ENST00000531613 SCXQ7RTU7 201 aa12.72□□□□□ -0.37
PCDHA8-202ENST00000531613 SDIM1Q6ZPB5 146 aa12.72□□□□□ -0.37
PCDHA8-202ENST00000531613 ZNF706Q9Y5V0 76 aaPredicted RBP12.72□□□□□ -0.37
PCDHA8-202ENST00000531613 Q6ZQY7 126 aa12.71□□□□□ -0.37
PCDHA8-202ENST00000531613 CNFNQ9BYD5 112 aa12.71□□□□□ -0.37
PCDHA8-202ENST00000531613 UBE2D1P51668 147 aa12.71□□□□□ -0.38
PCDHA8-202ENST00000531613 FN1P02751 2386 aaKnown RBP12.71□□□□□ -0.38
PCDHA8-202ENST00000531613 PPDPFQ9H3Y8 114 aa12.69□□□□□ -0.38
PCDHA8-202ENST00000531613 CRIP2P52943 208 aaPredicted RBP12.69□□□□□ -0.38
PCDHA8-202ENST00000531613 IGLV1-51P01701 117 aa12.69□□□□□ -0.38
PCDHA8-202ENST00000531613 CDC42SE2Q9NRR3 84 aa12.69□□□□□ -0.38
PCDHA8-202ENST00000531613 C20orf197Q8N268 126 aa12.68□□□□□ -0.38
PCDHA8-202ENST00000531613 MUC7Q8TAX7 377 aa12.68□□□□□ -0.38
PCDHA8-202ENST00000531613 SETD2Q9BYW2 2564 aaPredicted RBP12.68□□□□□ -0.38
PCDHA8-202ENST00000531613 COX17Q14061 63 aa12.68□□□□□ -0.38
PCDHA8-202ENST00000531613 ENHOQ6UWT2 76 aa12.68□□□□□ -0.38
PCDHA8-202ENST00000531613 Q8IZM0 81 aa12.68□□□□□ -0.38
PCDHA8-202ENST00000531613 GAS8-AS1O95177 125 aa12.67□□□□□ -0.38
PCDHA8-202ENST00000531613 ANKRD11Q6UB99 2663 aaPredicted RBP12.66□□□□□ -0.38
PCDHA8-202ENST00000531613 LINC00474Q9P2X8 69 aa12.66□□□□□ -0.38
PCDHA8-202ENST00000531613 C3orf84H3BNL1 204 aa12.66□□□□□ -0.38
PCDHA8-202ENST00000531613 USP9YO00507 2555 aaPredicted RBP12.66□□□□□ -0.38
PCDHA8-202ENST00000531613 A0A1W2PPR1 153 aa12.66□□□□□ -0.38
PCDHA8-202ENST00000531613 LRRK2Q5S007 2527 aa12.66□□□□□ -0.38
PCDHA8-202ENST00000531613 WDR87Q6ZQQ6 2873 aa12.66□□□□□ -0.38
PCDHA8-202ENST00000531613 MRPS12O15235 138 aaKnown RBP12.66□□□□□ -0.38
PCDHA8-202ENST00000531613 EDN2P20800 178 aa12.65□□□□□ -0.38
PCDHA8-202ENST00000531613 WFDC10BQ8IUB3 73 aa12.65□□□□□ -0.38
PCDHA8-202ENST00000531613 EP400Q96L91 3159 aa12.65□□□□□ -0.38
PCDHA8-202ENST00000531613 CHCHD7Q9BUK0 85 aa12.65□□□□□ -0.38
PCDHA8-202ENST00000531613 SPINK6Q6UWN8 80 aa12.65□□□□□ -0.39
PCDHA8-202ENST00000531613 CYSRT1A8MQ03 144 aa12.64□□□□□ -0.39
PCDHA8-202ENST00000531613 ZNF73O43830 326 aaPredicted RBP12.64□□□□□ -0.39
PCDHA8-202ENST00000531613 LRP4O75096 1905 aa12.63□□□□□ -0.39
PCDHA8-202ENST00000531613 ZNF462Q96JM2 2506 aa12.63□□□□□ -0.39
PCDHA8-202ENST00000531613 RPL37AP8A6NKH3 93 aa12.63□□□□□ -0.39
PCDHA8-202ENST00000531613 MT-ATP8P03928 68 aa12.63□□□□□ -0.39
PCDHA8-202ENST00000531613 SMIM11BQ8TCY0 68 aa12.63□□□□□ -0.39
PCDHA8-202ENST00000531613 NDUFV3P56181 108 aaKnown RBP12.62□□□□□ -0.39
PCDHA8-202ENST00000531613 LST1O00453 97 aa12.62□□□□□ -0.39
PCDHA8-202ENST00000531613 NUPR2A6NF83 97 aa12.62□□□□□ -0.39
PCDHA8-202ENST00000531613 BRI3O95415 125 aa12.62□□□□□ -0.39
PCDHA8-202ENST00000531613 ZNF580Q9UK33 172 aa12.62□□□□□ -0.39
PCDHA8-202ENST00000531613 IGIPA6NJ69 53 aa12.61□□□□□ -0.39
PCDHA8-202ENST00000531613 UQCRQO14949 82 aa12.61□□□□□ -0.39
PCDHA8-202ENST00000531613 LINC00242Q5T6M2 205 aa12.61□□□□□ -0.39
PCDHA8-202ENST00000531613 POM121L12Q8N7R1 296 aa12.61□□□□□ -0.39
PCDHA8-202ENST00000531613 PLAC8L1A1L4L8 177 aa12.6□□□□□ -0.39
PCDHA8-202ENST00000531613 C2orf91Q6ZV80 131 aa12.6□□□□□ -0.39
PCDHA8-202ENST00000531613 C16orf95Q9H693 158 aa12.6□□□□□ -0.39
PCDHA8-202ENST00000531613 RETNQ9HD89 108 aa12.6□□□□□ -0.39
PCDHA8-202ENST00000531613 EGFEM1PQ0D2K5 195 aa12.59□□□□□ -0.39
PCDHA8-202ENST00000531613 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.59□□□□□ -0.39
PCDHA8-202ENST00000531613 UNQ6190/PRO20217Q6UXQ8 127 aa12.57□□□□□ -0.4
PCDHA8-202ENST00000531613 C3orf22Q8N5N4 141 aa12.57□□□□□ -0.4
PCDHA8-202ENST00000531613 HRCT1Q6UXD1 115 aa12.56□□□□□ -0.4
PCDHA8-202ENST00000531613 WFDC13Q8IUB5 93 aa12.55□□□□□ -0.4
PCDHA8-202ENST00000531613 IGLV9-49A0A0B4J1Y8 123 aa12.55□□□□□ -0.4
PCDHA8-202ENST00000531613 Q6ZTC4 211 aa12.55□□□□□ -0.4
PCDHA8-202ENST00000531613 FAM236DA0A1B0GTK5 79 aa12.54□□□□□ -0.4
PCDHA8-202ENST00000531613 FAM236CP0DP71 79 aa12.54□□□□□ -0.4
PCDHA8-202ENST00000531613 PKD1L2Q7Z442 2459 aa12.54□□□□□ -0.4
PCDHA8-202ENST00000531613 SMIM1B2RUZ4 78 aa12.54□□□□□ -0.4
PCDHA8-202ENST00000531613 FAM19A3Q7Z5A8 133 aa12.53□□□□□ -0.4
PCDHA8-202ENST00000531613 M0QXV9 152 aa12.53□□□□□ -0.4
PCDHA8-202ENST00000531613 FHL2Q14192 279 aa12.53□□□□□ -0.4
PCDHA8-202ENST00000531613 ATG2AQ2TAZ0 1938 aa12.52□□□□□ -0.41
PCDHA8-202ENST00000531613 RPL28P46779 137 aaKnown RBP12.51□□□□□ -0.41
PCDHA8-202ENST00000531613 IGLV4-60A0A075B6I1 120 aa12.51□□□□□ -0.41
PCDHA8-202ENST00000531613 COX8CQ7Z4L0 72 aa12.5□□□□□ -0.41
PCDHA8-202ENST00000531613 BRK1Q8WUW1 75 aa12.5□□□□□ -0.41
PCDHA8-202ENST00000531613 IMUPQ9GZP8 106 aa12.49□□□□□ -0.41
PCDHA8-202ENST00000531613 C6orf223Q8N319 242 aa12.49□□□□□ -0.41
PCDHA8-202ENST00000531613 CSDC2Q9Y534 153 aaKnown RBP12.49□□□□□ -0.41
PCDHA8-202ENST00000531613 LINC00694P0DN24 101 aa12.48□□□□□ -0.41
PCDHA8-202ENST00000531613 C9orf116Q5BN46 136 aaPredicted RBP12.48□□□□□ -0.41
PCDHA8-202ENST00000531613 SPTBN4Q9H254 2564 aa12.48□□□□□ -0.41
PCDHA8-202ENST00000531613 K7ERS5 55 aa12.48□□□□□ -0.41
PCDHA8-202ENST00000531613 COL5A1P20908 1838 aaPredicted RBP12.48□□□□□ -0.41
PCDHA8-202ENST00000531613 BEAN1Q3B7T3 259 aa12.48□□□□□ -0.41
PCDHA8-202ENST00000531613 C10orf25Q5T742 122 aa12.48□□□□□ -0.41
PCDHA8-202ENST00000531613 NTM-AS1Q6ZSK4 140 aa12.47□□□□□ -0.41
PCDHA8-202ENST00000531613 FASNP49327 2511 aaKnown RBP12.47□□□□□ -0.41
PCDHA8-202ENST00000531613 TRBV10-3A0A0K0K1G6 114 aa12.47□□□□□ -0.41
PCDHA8-202ENST00000531613 URB1-AS1Q96HZ7 61 aa12.46□□□□□ -0.41
PCDHA8-202ENST00000531613 SERP2Q8N6R1 65 aa12.46□□□□□ -0.41
PCDHA8-202ENST00000531613 MPLKIPQ8TAP9 179 aa12.46□□□□□ -0.41
PCDHA8-202ENST00000531613 Q8N9L7 120 aa12.46□□□□□ -0.41
PCDHA8-202ENST00000531613 PTPRSQ13332 1948 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms