RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, human

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-222	ENST00000531551	SYS1-DBNDD2	H3BUS1	97 aa		11.74	□□□□□ -0.53
CTSB-222	ENST00000531551	PMCHL2	Q9BQD1	86 aa		11.74	□□□□□ -0.53
CTSB-222	ENST00000531551	SEC11A	P67812	179 aa		11.74	□□□□□ -0.53
CTSB-222	ENST00000531551	FOXI1	Q12951	378 aa		11.74	□□□□□ -0.53
CTSB-222	ENST00000531551	KRTAP26-1	Q6PEX3	210 aa		11.74	□□□□□ -0.53
CTSB-222	ENST00000531551		Q6ZRN7	208 aa	Predicted RBP	11.74	□□□□□ -0.53
CTSB-222	ENST00000531551	C5orf38	Q86SI9	138 aa		11.74	□□□□□ -0.53
CTSB-222	ENST00000531551	MRPL35	Q9NZE8	188 aa	Known RBP	11.74	□□□□□ -0.53
CTSB-222	ENST00000531551	DNAH17	Q9UFH2	4485 aa		11.72	□□□□□ -0.53
CTSB-222	ENST00000531551	TINCR	A0A1B0GVN0	87 aa		11.72	□□□□□ -0.53
CTSB-222	ENST00000531551		F8VRH5	84 aa		11.72	□□□□□ -0.53
CTSB-222	ENST00000531551	HERVK_113	P63121	156 aa		11.72	□□□□□ -0.53
CTSB-222	ENST00000531551	ODF1	Q14990	250 aa		11.72	□□□□□ -0.53
CTSB-222	ENST00000531551	MAPKAPK5-AS1	Q8N8E1	139 aa		11.72	□□□□□ -0.53
CTSB-222	ENST00000531551	CHAC1	Q9BUX1	264 aa		11.72	□□□□□ -0.53
CTSB-222	ENST00000531551	IGLV4-69	A0A075B6H9	119 aa		11.72	□□□□□ -0.53
CTSB-222	ENST00000531551	LECT2	O14960	151 aa		11.72	□□□□□ -0.53
CTSB-222	ENST00000531551	LINC00469	Q8N7U9	141 aa		11.72	□□□□□ -0.53
CTSB-222	ENST00000531551	COX7A2L	O14548	114 aa		11.71	□□□□□ -0.53
CTSB-222	ENST00000531551	IGLC3	P0DOY3	106 aa		11.71	□□□□□ -0.53
CTSB-222	ENST00000531551	MAL	P21145	153 aa		11.71	□□□□□ -0.53
CTSB-222	ENST00000531551	PET117	Q6UWS5	81 aa		11.71	□□□□□ -0.53
CTSB-222	ENST00000531551	FAM19A3	Q7Z5A8	133 aa		11.71	□□□□□ -0.53
CTSB-222	ENST00000531551	SPATA12	Q7Z6I5	190 aa		11.71	□□□□□ -0.53
CTSB-222	ENST00000531551	IGHV3OR16-9	A0A0B4J2B5	98 aa		11.7	□□□□□ -0.54
CTSB-222	ENST00000531551	RTL8C	O15255	209 aa		11.7	□□□□□ -0.54
CTSB-222	ENST00000531551	OR10D4P	Q8NGN7	298 aa		11.7	□□□□□ -0.54
CTSB-222	ENST00000531551	CDKN2A-AS1	Q9UH64	79 aa		11.7	□□□□□ -0.54
CTSB-222	ENST00000531551	FRAS1	Q86XX4	4008 aa		11.7	□□□□□ -0.54
CTSB-222	ENST00000531551	C11orf86	A6NJI1	115 aa		11.7	□□□□□ -0.54
CTSB-222	ENST00000531551	TMEM170B	Q5T4T1	132 aa		11.68	□□□□□ -0.54
CTSB-222	ENST00000531551	C20orf202	A1L168	122 aa		11.67	□□□□□ -0.54
CTSB-222	ENST00000531551	DPM2	O94777	84 aa		11.67	□□□□□ -0.54
CTSB-222	ENST00000531551	LINC01545	Q5VT33	79 aa		11.67	□□□□□ -0.54
CTSB-222	ENST00000531551		A0A087WZ39	114 aa		11.66	□□□□□ -0.54
CTSB-222	ENST00000531551	USP17L23	D6RBM5	183 aa		11.66	□□□□□ -0.54
CTSB-222	ENST00000531551	IGKC	P01834	107 aa		11.66	□□□□□ -0.54
CTSB-222	ENST00000531551	ZNF22	P17026	224 aa	Predicted RBP	11.66	□□□□□ -0.54
CTSB-222	ENST00000531551	PLN	P26678	52 aa		11.66	□□□□□ -0.54
CTSB-222	ENST00000531551	TNP2	Q05952	138 aa		11.66	□□□□□ -0.54
CTSB-222	ENST00000531551	WFDC2	Q14508	124 aa		11.66	□□□□□ -0.54
CTSB-222	ENST00000531551		H3BRM9	83 aa		11.66	□□□□□ -0.54
CTSB-222	ENST00000531551	APOM	O95445	188 aa		11.65	□□□□□ -0.54
CTSB-222	ENST00000531551	SPINK8	P0C7L1	97 aa		11.65	□□□□□ -0.54
CTSB-222	ENST00000531551	HIGD2B	Q4VC39	106 aa		11.65	□□□□□ -0.54
CTSB-222	ENST00000531551	CFAP161	Q6P656	301 aa		11.65	□□□□□ -0.54
CTSB-222	ENST00000531551	FAT2	Q9NYQ8	4349 aa		11.64	□□□□□ -0.55
CTSB-222	ENST00000531551	IGLV5-45	A0A087WSX0	123 aa		11.64	□□□□□ -0.55
CTSB-222	ENST00000531551	IGHV3-64	A0A075B6Q5	118 aa		11.63	□□□□□ -0.55
CTSB-222	ENST00000531551		A0A087WTM6	91 aa		11.63	□□□□□ -0.55
CTSB-222	ENST00000531551	IGHV1-58	A0A0C4DH39	117 aa		11.63	□□□□□ -0.55
CTSB-222	ENST00000531551	LRCOL1	A6NCL2	159 aa		11.63	□□□□□ -0.55
CTSB-222	ENST00000531551	C15orf56	Q8N910	161 aa		11.63	□□□□□ -0.55
CTSB-222	ENST00000531551	SCGB1D1	O95968	90 aa		11.63	□□□□□ -0.55
CTSB-222	ENST00000531551	ORAOV1	Q8WV07	137 aa		11.63	□□□□□ -0.55
CTSB-222	ENST00000531551	ATOH7	Q8N100	152 aa		11.62	□□□□□ -0.55
CTSB-222	ENST00000531551	TOMM7	Q9P0U1	55 aa		11.62	□□□□□ -0.55
CTSB-222	ENST00000531551	hDV102S1	A0JD36	115 aa		11.61	□□□□□ -0.55
CTSB-222	ENST00000531551	LINC00526	Q96FQ7	95 aa		11.61	□□□□□ -0.55
CTSB-222	ENST00000531551	SMIM1	B2RUZ4	78 aa		11.61	□□□□□ -0.55
CTSB-222	ENST00000531551	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	11.6	□□□□□ -0.55
CTSB-222	ENST00000531551	ZNF561-AS1	K7EIQ3	104 aa		11.6	□□□□□ -0.55
CTSB-222	ENST00000531551	EREG	O14944	169 aa		11.6	□□□□□ -0.55
CTSB-222	ENST00000531551	AKR1D1	P51857	326 aa		11.6	□□□□□ -0.55
CTSB-222	ENST00000531551	LINC00336	Q6ZUF6	198 aa		11.6	□□□□□ -0.55
CTSB-222	ENST00000531551	LINC01561	Q8N1V8	128 aa		11.6	□□□□□ -0.55
CTSB-222	ENST00000531551	SPAG11B	Q08648	103 aa		11.59	□□□□□ -0.55
CTSB-222	ENST00000531551	TMEM223	A0PJW6	202 aa		11.59	□□□□□ -0.55
CTSB-222	ENST00000531551	C14orf177	Q52M58	125 aa		11.59	□□□□□ -0.55
CTSB-222	ENST00000531551		Q8N814	137 aa		11.59	□□□□□ -0.55
CTSB-222	ENST00000531551	PRSS2	P07478	247 aa		11.58	□□□□□ -0.56
CTSB-222	ENST00000531551	DNAH11	Q96DT5	4516 aa		11.57	□□□□□ -0.56
CTSB-222	ENST00000531551	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.57	□□□□□ -0.56
CTSB-222	ENST00000531551	HERVK_113	P61574	105 aa		11.57	□□□□□ -0.56
CTSB-222	ENST00000531551	STPG4	Q8N801	248 aa		11.57	□□□□□ -0.56
CTSB-222	ENST00000531551	C6orf226	Q5I0X4	101 aa		11.56	□□□□□ -0.56
CTSB-222	ENST00000531551	FUS	P35637	526 aa	Known RBP eCLIP	11.55	□□□□□ -0.56
CTSB-222	ENST00000531551	COX7B2	Q8TF08	81 aa		11.55	□□□□□ -0.56
CTSB-222	ENST00000531551	IGLV5-39	A0A0G2JS06	123 aa		11.54	□□□□□ -0.56
CTSB-222	ENST00000531551	JOSD1	Q15040	202 aa	Predicted RBP	11.54	□□□□□ -0.56
CTSB-222	ENST00000531551		Q8IZM0	81 aa		11.54	□□□□□ -0.56
CTSB-222	ENST00000531551	CAMK2N2	Q96S95	79 aa		11.54	□□□□□ -0.56
CTSB-222	ENST00000531551	CKS1B	P61024	79 aa		11.53	□□□□□ -0.56
CTSB-222	ENST00000531551	KIAA0087	Q14695	138 aa		11.53	□□□□□ -0.56
CTSB-222	ENST00000531551	C2orf82	Q6UX34	121 aa		11.53	□□□□□ -0.56
CTSB-222	ENST00000531551	NTN5	Q8WTR8	489 aa	Predicted RBP	11.53	□□□□□ -0.56
CTSB-222	ENST00000531551	MAJIN	Q3KP22	176 aa		11.52	□□□□□ -0.57
CTSB-222	ENST00000531551	PKD1	P98161	4303 aa		11.51	□□□□□ -0.57
CTSB-222	ENST00000531551	SLPI	P03973	132 aa		11.51	□□□□□ -0.57
CTSB-222	ENST00000531551	HSBP1L1	C9JCN9	74 aa		11.51	□□□□□ -0.57
CTSB-222	ENST00000531551	PYY3	Q5JQD4	70 aa		11.51	□□□□□ -0.57
CTSB-222	ENST00000531551	C2orf48	Q96LS8	159 aa		11.51	□□□□□ -0.57
CTSB-222	ENST00000531551		E9PLD3	99 aa		11.5	□□□□□ -0.57
CTSB-222	ENST00000531551	NDUFA1	O15239	70 aa		11.5	□□□□□ -0.57
CTSB-222	ENST00000531551	LEPROT	O15243	131 aa		11.5	□□□□□ -0.57
CTSB-222	ENST00000531551	KRTAP10-2	P60368	255 aa		11.5	□□□□□ -0.57
CTSB-222	ENST00000531551	SYCN	Q0VAF6	134 aa		11.5	□□□□□ -0.57
CTSB-222	ENST00000531551	IGLV5-52	A0A0A0MRZ9	124 aa		11.49	□□□□□ -0.57
CTSB-222	ENST00000531551	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.49	□□□□□ -0.57
CTSB-222	ENST00000531551	ANKRD39	Q53RE8	183 aa		11.49	□□□□□ -0.57

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