RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 C5orf38Q86SI9 138 aa8.22□□□□□ -1.09
AMBRA1-210ENST00000531542 SMIM2Q9BVW6 85 aa8.22□□□□□ -1.09
AMBRA1-210ENST00000531542 MRPL35Q9NZE8 188 aaKnown RBP8.22□□□□□ -1.09
AMBRA1-210ENST00000531542 A0A1B0GXF2 115 aa8.21□□□□□ -1.1
AMBRA1-210ENST00000531542 C9orf116Q5BN46 136 aaPredicted RBP8.21□□□□□ -1.1
AMBRA1-210ENST00000531542 LRP2P98164 4655 aa8.2□□□□□ -1.1
AMBRA1-210ENST00000531542 HBBP68871 147 aa8.2□□□□□ -1.1
AMBRA1-210ENST00000531542 SPAG11BQ08648 103 aa8.2□□□□□ -1.1
AMBRA1-210ENST00000531542 IMMP2LQ96T52 175 aa8.2□□□□□ -1.1
AMBRA1-210ENST00000531542 D6R8Y8 96 aa8.19□□□□□ -1.1
AMBRA1-210ENST00000531542 TLX1NBP0CAT3 122 aa8.19□□□□□ -1.1
AMBRA1-210ENST00000531542 RPL39P62891 51 aaKnown RBP8.19□□□□□ -1.1
AMBRA1-210ENST00000531542 SRSF3P84103 164 aaKnown RBP8.19□□□□□ -1.1
AMBRA1-210ENST00000531542 PSORS1C2Q9UIG4 136 aa8.19□□□□□ -1.1
AMBRA1-210ENST00000531542 PYGO1Q9Y3Y4 419 aa8.19□□□□□ -1.1
AMBRA1-210ENST00000531542 ATP5L2Q7Z4Y8 100 aa8.18□□□□□ -1.1
AMBRA1-210ENST00000531542 PRSS47A8MTI9 375 aa8.17□□□□□ -1.1
AMBRA1-210ENST00000531542 NDUFA1O15239 70 aa8.17□□□□□ -1.1
AMBRA1-210ENST00000531542 NPYP01303 97 aa8.17□□□□□ -1.1
AMBRA1-210ENST00000531542 RPL18AQ02543 176 aaKnown RBP8.17□□□□□ -1.1
AMBRA1-210ENST00000531542 MRPL54Q6P161 138 aaKnown RBP8.17□□□□□ -1.1
AMBRA1-210ENST00000531542 ORMDL3Q8N138 153 aa8.17□□□□□ -1.1
AMBRA1-210ENST00000531542 ORAOV1Q8WV07 137 aa8.17□□□□□ -1.1
AMBRA1-210ENST00000531542 OPRPNQ99935 248 aaPredicted RBP8.17□□□□□ -1.1
AMBRA1-210ENST00000531542 A0A087WZ39 114 aa8.16□□□□□ -1.1
AMBRA1-210ENST00000531542 MT-ND6P03923 174 aa8.16□□□□□ -1.1
AMBRA1-210ENST00000531542 LAMTOR2Q9Y2Q5 125 aa8.16□□□□□ -1.1
AMBRA1-210ENST00000531542 IFITM10A6NMD0 228 aa8.15□□□□□ -1.1
AMBRA1-210ENST00000531542 RAB5AP20339 215 aa8.15□□□□□ -1.1
AMBRA1-210ENST00000531542 IFI27P40305 119 aaPredicted RBP8.15□□□□□ -1.1
AMBRA1-210ENST00000531542 LINC01561Q8N1V8 128 aa8.15□□□□□ -1.1
AMBRA1-210ENST00000531542 TGIF2-C20orf24A0A0A6YYL0 155 aa8.14□□□□□ -1.11
AMBRA1-210ENST00000531542 KIAA0087Q14695 138 aa8.14□□□□□ -1.11
AMBRA1-210ENST00000531542 C10orf25Q5T742 122 aa8.14□□□□□ -1.11
AMBRA1-210ENST00000531542 TMEM136Q6ZRR5 245 aa8.14□□□□□ -1.11
AMBRA1-210ENST00000531542 PHF5AQ7RTV0 110 aaKnown RBP8.14□□□□□ -1.11
AMBRA1-210ENST00000531542 PRELID3AQ96N28 172 aa8.14□□□□□ -1.11
AMBRA1-210ENST00000531542 RNF213Q63HN8 5207 aa8.13□□□□□ -1.11
AMBRA1-210ENST00000531542 A0A1B0GVG6 124 aa8.13□□□□□ -1.11
AMBRA1-210ENST00000531542 NPSP0C0P6 89 aa8.13□□□□□ -1.11
AMBRA1-210ENST00000531542 ODF1Q14990 250 aa8.13□□□□□ -1.11
AMBRA1-210ENST00000531542 C1orf137Q5JT78 98 aa8.13□□□□□ -1.11
AMBRA1-210ENST00000531542 LINC00242Q5T6M2 205 aa8.13□□□□□ -1.11
AMBRA1-210ENST00000531542 UNQ6190/PRO20217Q6UXQ8 127 aa8.13□□□□□ -1.11
AMBRA1-210ENST00000531542 C6orf48Q9UBA6 75 aa8.13□□□□□ -1.11
AMBRA1-210ENST00000531542 IGLV4-3A0A075B6K6 122 aa8.12□□□□□ -1.11
AMBRA1-210ENST00000531542 TRBV30A0A0K0K1B3 111 aa8.12□□□□□ -1.11
AMBRA1-210ENST00000531542 IGLV7-43P04211 117 aa8.12□□□□□ -1.11
AMBRA1-210ENST00000531542 DIRC1Q969H9 104 aa8.12□□□□□ -1.11
AMBRA1-210ENST00000531542 TMEM141Q96I45 108 aa8.12□□□□□ -1.11
AMBRA1-210ENST00000531542 K7EMI3 77 aa8.11□□□□□ -1.11
AMBRA1-210ENST00000531542 PNRC1Q12796 327 aaPredicted RBP8.11□□□□□ -1.11
AMBRA1-210ENST00000531542 NDUFC2-KCTD14E9PQ53 114 aa8.1□□□□□ -1.11
AMBRA1-210ENST00000531542 UBE2D1P51668 147 aa8.1□□□□□ -1.11
AMBRA1-210ENST00000531542 TEX43Q6ZNM6 134 aa8.1□□□□□ -1.11
AMBRA1-210ENST00000531542 FAM168BA1KXE4 195 aa8.09□□□□□ -1.11
AMBRA1-210ENST00000531542 H0Y9J4 135 aa8.09□□□□□ -1.11
AMBRA1-210ENST00000531542 FAM19A3Q7Z5A8 133 aa8.09□□□□□ -1.11
AMBRA1-210ENST00000531542 KRTAP7-1Q8IUC3 87 aa8.09□□□□□ -1.11
AMBRA1-210ENST00000531542 Q8N8P6 123 aa8.09□□□□□ -1.11
AMBRA1-210ENST00000531542 ANAPC16Q96DE5 110 aa8.09□□□□□ -1.11
AMBRA1-210ENST00000531542 MAP1LC3AQ9H492 121 aa8.09□□□□□ -1.11
AMBRA1-210ENST00000531542 CYSLTR1Q9Y271 337 aa8.09□□□□□ -1.11
AMBRA1-210ENST00000531542 KRTAP11-1Q8IUC1 163 aa8.08□□□□□ -1.12
AMBRA1-210ENST00000531542 AMELXQ99217 191 aa8.08□□□□□ -1.12
AMBRA1-210ENST00000531542 C2orf88Q9BSF0 95 aa8.08□□□□□ -1.12
AMBRA1-210ENST00000531542 MT-ND4LP03901 98 aa8.07□□□□□ -1.12
AMBRA1-210ENST00000531542 GAGE2EQ4V326 116 aa8.07□□□□□ -1.12
AMBRA1-210ENST00000531542 ORMDL2Q53FV1 153 aa8.07□□□□□ -1.12
AMBRA1-210ENST00000531542 C2orf66Q6UXQ4 117 aa8.07□□□□□ -1.12
AMBRA1-210ENST00000531542 Q6ZN92 141 aa8.07□□□□□ -1.12
AMBRA1-210ENST00000531542 GAGE2DQ9UEU5 116 aa8.07□□□□□ -1.12
AMBRA1-210ENST00000531542 IGLV1-50A0A075B6I6 118 aa8.06□□□□□ -1.12
AMBRA1-210ENST00000531542 IGIPA6NJ69 53 aa8.06□□□□□ -1.12
AMBRA1-210ENST00000531542 C2orf82Q6UX34 121 aa8.06□□□□□ -1.12
AMBRA1-210ENST00000531542 LINC00173Q6ZV60 143 aa8.06□□□□□ -1.12
AMBRA1-210ENST00000531542 FAM19A5Q7Z5A7 132 aaPredicted RBP8.06□□□□□ -1.12
AMBRA1-210ENST00000531542 PACRGQ96M98 296 aaPredicted RBP8.06□□□□□ -1.12
AMBRA1-210ENST00000531542 VCX2Q9H322 139 aa8.06□□□□□ -1.12
AMBRA1-210ENST00000531542 LOC389332A0A1B0GUA5 103 aa8.05□□□□□ -1.12
AMBRA1-210ENST00000531542 M0QXV9 152 aa8.05□□□□□ -1.12
AMBRA1-210ENST00000531542 G0S2P27469 103 aa8.05□□□□□ -1.12
AMBRA1-210ENST00000531542 PAPPA-AS1Q5QFB9 102 aa8.05□□□□□ -1.12
AMBRA1-210ENST00000531542 C9orf129Q5T035 196 aaKnown RBP8.05□□□□□ -1.12
AMBRA1-210ENST00000531542 Q8IZM0 81 aa8.05□□□□□ -1.12
AMBRA1-210ENST00000531542 NXT2Q9NPJ8 142 aaKnown RBP8.05□□□□□ -1.12
AMBRA1-210ENST00000531542 KRTAP1-4P0C5Y4 121 aa8.04□□□□□ -1.12
AMBRA1-210ENST00000531542 SEC11AP67812 179 aa8.04□□□□□ -1.12
AMBRA1-210ENST00000531542 PRR26Q8N8Z3 221 aa8.04□□□□□ -1.12
AMBRA1-210ENST00000531542 HERVK_113P63121 156 aa8.03□□□□□ -1.12
AMBRA1-210ENST00000531542 PRSS2P07478 247 aa8.02□□□□□ -1.13
AMBRA1-210ENST00000531542 CKS1BP61024 79 aa8.02□□□□□ -1.13
AMBRA1-210ENST00000531542 UBE2BP63146 152 aa8.02□□□□□ -1.13
AMBRA1-210ENST00000531542 C6orf226Q5I0X4 101 aa8.02□□□□□ -1.13
AMBRA1-210ENST00000531542 TIMM17AQ99595 171 aa8.02□□□□□ -1.13
AMBRA1-210ENST00000531542 CARHSP1Q9Y2V2 147 aaKnown RBP8.02□□□□□ -1.13
AMBRA1-210ENST00000531542 RPL13AP40429 203 aaKnown RBP8.01□□□□□ -1.13
AMBRA1-210ENST00000531542 LINC01549A6NIU2 74 aa8□□□□□ -1.13
AMBRA1-210ENST00000531542 NUPR1O60356 82 aa8□□□□□ -1.13
AMBRA1-210ENST00000531542 RAB14P61106 215 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms