RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 LOC389332A0A1B0GUA5 103 aa13.99□□□□□ -0.17
TRAPPC4-210ENST00000531290 COX7A2LO14548 114 aa13.97□□□□□ -0.17
TRAPPC4-210ENST00000531290 RHEBQ15382 184 aa13.97□□□□□ -0.17
TRAPPC4-210ENST00000531290 RPS10P5Q9NQ39 176 aa13.97□□□□□ -0.17
TRAPPC4-210ENST00000531290 CARHSP1Q9Y2V2 147 aaKnown RBP13.97□□□□□ -0.17
TRAPPC4-210ENST00000531290 UBR4Q5T4S7 5183 aa13.97□□□□□ -0.17
TRAPPC4-210ENST00000531290 PRR3P79522 188 aaKnown RBP13.96□□□□□ -0.17
TRAPPC4-210ENST00000531290 NDUFA5Q16718 116 aa13.96□□□□□ -0.17
TRAPPC4-210ENST00000531290 C10orf91Q5T1B1 145 aa13.96□□□□□ -0.17
TRAPPC4-210ENST00000531290 SPANXA1Q9NS26 97 aa13.96□□□□□ -0.17
TRAPPC4-210ENST00000531290 TRAV13-1A0A0B4J241 112 aa13.95□□□□□ -0.18
TRAPPC4-210ENST00000531290 PRSS47A8MTI9 375 aa13.95□□□□□ -0.18
TRAPPC4-210ENST00000531290 RPL39P62891 51 aaKnown RBP13.95□□□□□ -0.18
TRAPPC4-210ENST00000531290 RNASE13Q5GAN3 156 aaKnown RBP13.95□□□□□ -0.18
TRAPPC4-210ENST00000531290 IGLV4-69A0A075B6H9 119 aa13.94□□□□□ -0.18
TRAPPC4-210ENST00000531290 IFI27P40305 119 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC4-210ENST00000531290 COX19Q49B96 90 aa13.93□□□□□ -0.18
TRAPPC4-210ENST00000531290 Q8N8P6 123 aa13.93□□□□□ -0.18
TRAPPC4-210ENST00000531290 GAGE2BQ13066 116 aa13.92□□□□□ -0.18
TRAPPC4-210ENST00000531290 Q6ZUT4 128 aa13.92□□□□□ -0.18
TRAPPC4-210ENST00000531290 NXT2Q9NPJ8 142 aaKnown RBP13.92□□□□□ -0.18
TRAPPC4-210ENST00000531290 LOC107984640A0A0U1RRK4 108 aa13.91□□□□□ -0.18
TRAPPC4-210ENST00000531290 K7EMI3 77 aa13.91□□□□□ -0.18
TRAPPC4-210ENST00000531290 APOC3P02656 99 aa13.91□□□□□ -0.18
TRAPPC4-210ENST00000531290 C5orf38Q86SI9 138 aa13.91□□□□□ -0.18
TRAPPC4-210ENST00000531290 CAMK2N2Q96S95 79 aa13.91□□□□□ -0.18
TRAPPC4-210ENST00000531290 GNB1LQ9BYB4 327 aa13.91□□□□□ -0.18
TRAPPC4-210ENST00000531290 APOMO95445 188 aa13.9□□□□□ -0.18
TRAPPC4-210ENST00000531290 PTTG1IPP53801 180 aa13.9□□□□□ -0.18
TRAPPC4-210ENST00000531290 MRPS36P82909 103 aaKnown RBP13.9□□□□□ -0.18
TRAPPC4-210ENST00000531290 ORMDL2Q53FV1 153 aa13.9□□□□□ -0.18
TRAPPC4-210ENST00000531290 SNAPINO95295 136 aa13.89□□□□□ -0.19
TRAPPC4-210ENST00000531290 G0S2P27469 103 aa13.89□□□□□ -0.19
TRAPPC4-210ENST00000531290 CYSLTR1Q9Y271 337 aa13.89□□□□□ -0.19
TRAPPC4-210ENST00000531290 MT-ND6P03923 174 aa13.88□□□□□ -0.19
TRAPPC4-210ENST00000531290 KIAA1644Q3SXP7 199 aa13.88□□□□□ -0.19
TRAPPC4-210ENST00000531290 Q6ZRP5 223 aa13.88□□□□□ -0.19
TRAPPC4-210ENST00000531290 SVBPQ8N300 66 aa13.88□□□□□ -0.19
TRAPPC4-210ENST00000531290 C2orf48Q96LS8 159 aa13.88□□□□□ -0.19
TRAPPC4-210ENST00000531290 LINC01600Q96MT4 127 aa13.88□□□□□ -0.19
TRAPPC4-210ENST00000531290 IFITM10A6NMD0 228 aa13.87□□□□□ -0.19
TRAPPC4-210ENST00000531290 SPINK6Q6UWN8 80 aa13.87□□□□□ -0.19
TRAPPC4-210ENST00000531290 PYGO1Q9Y3Y4 419 aa13.87□□□□□ -0.19
TRAPPC4-210ENST00000531290 OPRPNQ99935 248 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC4-210ENST00000531290 TNXBP22105 4242 aa13.85□□□□□ -0.19
TRAPPC4-210ENST00000531290 SPAG11BQ08648 103 aa13.85□□□□□ -0.19
TRAPPC4-210ENST00000531290 REG3GQ6UW15 175 aa13.85□□□□□ -0.19
TRAPPC4-210ENST00000531290 C2orf66Q6UXQ4 117 aa13.85□□□□□ -0.19
TRAPPC4-210ENST00000531290 Q6ZN92 141 aa13.85□□□□□ -0.19
TRAPPC4-210ENST00000531290 FABP9Q0Z7S8 132 aa13.84□□□□□ -0.19
TRAPPC4-210ENST00000531290 TMEM141Q96I45 108 aa13.84□□□□□ -0.19
TRAPPC4-210ENST00000531290 A0A1W2PNN7 141 aa13.83□□□□□ -0.2
TRAPPC4-210ENST00000531290 TEX43Q6ZNM6 134 aa13.83□□□□□ -0.2
TRAPPC4-210ENST00000531290 MRPL18Q9H0U6 180 aaKnown RBP13.83□□□□□ -0.2
TRAPPC4-210ENST00000531290 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC4-210ENST00000531290 RPL18AQ02543 176 aaKnown RBP13.82□□□□□ -0.2
TRAPPC4-210ENST00000531290 OR10D4PQ8NGN7 298 aa13.82□□□□□ -0.2
TRAPPC4-210ENST00000531290 C2orf88Q9BSF0 95 aa13.82□□□□□ -0.2
TRAPPC4-210ENST00000531290 IGLV4-3A0A075B6K6 122 aa13.81□□□□□ -0.2
TRAPPC4-210ENST00000531290 SRSF9Q13242 221 aaKnown RBP eCLIP13.81□□□□□ -0.2
TRAPPC4-210ENST00000531290 RNF151Q2KHN1 245 aa13.81□□□□□ -0.2
TRAPPC4-210ENST00000531290 TGIF2-C20orf24A0A0A6YYL0 155 aa13.8□□□□□ -0.2
TRAPPC4-210ENST00000531290 A0A0J9YXV3 536 aa13.8□□□□□ -0.2
TRAPPC4-210ENST00000531290 C9orf116Q5BN46 136 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC4-210ENST00000531290 PAPPA-AS1Q5QFB9 102 aa13.8□□□□□ -0.2
TRAPPC4-210ENST00000531290 ORAOV1Q8WV07 137 aa13.8□□□□□ -0.2
TRAPPC4-210ENST00000531290 FAM104AQ969W3 186 aa13.8□□□□□ -0.2
TRAPPC4-210ENST00000531290 ALKBH7Q9BT30 221 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC4-210ENST00000531290 VCX2Q9H322 139 aa13.8□□□□□ -0.2
TRAPPC4-210ENST00000531290 IGHV3OR16-9A0A0B4J2B5 98 aa13.79□□□□□ -0.2
TRAPPC4-210ENST00000531290 NPSP0C0P6 89 aa13.79□□□□□ -0.2
TRAPPC4-210ENST00000531290 F8WDY8 70 aa13.78□□□□□ -0.2
TRAPPC4-210ENST00000531290 SMCO4Q9NRQ5 59 aa13.78□□□□□ -0.2
TRAPPC4-210ENST00000531290 TRAPPC1Q9Y5R8 145 aa13.78□□□□□ -0.2
TRAPPC4-210ENST00000531290 LINC01549A6NIU2 74 aa13.77□□□□□ -0.21
TRAPPC4-210ENST00000531290 MRPL35Q9NZE8 188 aaKnown RBP13.77□□□□□ -0.21
TRAPPC4-210ENST00000531290 FA2HQ7L5A8 372 aa13.76□□□□□ -0.21
TRAPPC4-210ENST00000531290 NDUFA1O15239 70 aa13.75□□□□□ -0.21
TRAPPC4-210ENST00000531290 KRTAP10-8P60410 259 aa13.75□□□□□ -0.21
TRAPPC4-210ENST00000531290 TOMM6Q96B49 74 aa13.75□□□□□ -0.21
TRAPPC4-210ENST00000531290 IGIPA6NJ69 53 aa13.74□□□□□ -0.21
TRAPPC4-210ENST00000531290 SCGB3A1Q96QR1 104 aa13.74□□□□□ -0.21
TRAPPC4-210ENST00000531290 PSORS1C2Q9UIG4 136 aa13.74□□□□□ -0.21
TRAPPC4-210ENST00000531290 LINC00242Q5T6M2 205 aa13.73□□□□□ -0.21
TRAPPC4-210ENST00000531290 TIMM17AQ99595 171 aa13.73□□□□□ -0.21
TRAPPC4-210ENST00000531290 UBE2D1P51668 147 aa13.72□□□□□ -0.21
TRAPPC4-210ENST00000531290 PHF5AQ7RTV0 110 aaKnown RBP13.72□□□□□ -0.21
TRAPPC4-210ENST00000531290 ERASQ7Z444 233 aa13.72□□□□□ -0.21
TRAPPC4-210ENST00000531290 AMELXQ99217 191 aa13.72□□□□□ -0.21
TRAPPC4-210ENST00000531290 SEC11AP67812 179 aa13.71□□□□□ -0.21
TRAPPC4-210ENST00000531290 UNQ6190/PRO20217Q6UXQ8 127 aa13.71□□□□□ -0.21
TRAPPC4-210ENST00000531290 A0A087WZ39 114 aa13.7□□□□□ -0.22
TRAPPC4-210ENST00000531290 ODF1Q14990 250 aa13.7□□□□□ -0.22
TRAPPC4-210ENST00000531290 C1orf137Q5JT78 98 aa13.7□□□□□ -0.22
TRAPPC4-210ENST00000531290 C10orf25Q5T742 122 aa13.7□□□□□ -0.22
TRAPPC4-210ENST00000531290 LINC01546A6NGU7 62 aa13.69□□□□□ -0.22
TRAPPC4-210ENST00000531290 ZC2HC1BQ5TFG8 222 aa13.69□□□□□ -0.22
TRAPPC4-210ENST00000531290 TLX1NBP0CAT3 122 aa13.68□□□□□ -0.22
TRAPPC4-210ENST00000531290 GEMIN7Q9H840 131 aaKnown RBP13.68□□□□□ -0.22
TRAPPC4-210ENST00000531290 C6orf48Q9UBA6 75 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms