RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 KRTAP10-4P60372 401 aaPredicted RBP12.13□□□□□ -0.47
UBXN1-211ENST00000531056 TRAV13-1A0A0B4J241 112 aa12.12□□□□□ -0.47
UBXN1-211ENST00000531056 ORMDL2Q53FV1 153 aa12.12□□□□□ -0.47
UBXN1-211ENST00000531056 MRPS36P82909 103 aaKnown RBP12.11□□□□□ -0.47
UBXN1-211ENST00000531056 TRGC2P03986 189 aa12.1□□□□□ -0.47
UBXN1-211ENST00000531056 CHTF8P0CG12 524 aa12.1□□□□□ -0.47
UBXN1-211ENST00000531056 C18orf32Q8TCD1 76 aa12.1□□□□□ -0.47
UBXN1-211ENST00000531056 SPACA4Q8TDM5 124 aa12.1□□□□□ -0.47
UBXN1-211ENST00000531056 OPRPNQ99935 248 aaPredicted RBP12.1□□□□□ -0.47
UBXN1-211ENST00000531056 G0S2P27469 103 aa12.09□□□□□ -0.47
UBXN1-211ENST00000531056 FA2HQ7L5A8 372 aa12.09□□□□□ -0.47
UBXN1-211ENST00000531056 LINC00526Q96FQ7 95 aa12.09□□□□□ -0.47
UBXN1-211ENST00000531056 MYCBP2O75592 4640 aa12.09□□□□□ -0.47
UBXN1-211ENST00000531056 COX7A2LO14548 114 aa12.08□□□□□ -0.48
UBXN1-211ENST00000531056 COX6A2Q02221 97 aa12.08□□□□□ -0.48
UBXN1-211ENST00000531056 FLG2Q5D862 2391 aaPredicted RBP12.07□□□□□ -0.48
UBXN1-211ENST00000531056 PYGO1Q9Y3Y4 419 aa12.07□□□□□ -0.48
UBXN1-211ENST00000531056 LINC01546A6NGU7 62 aa12.06□□□□□ -0.48
UBXN1-211ENST00000531056 MALP21145 153 aa12.06□□□□□ -0.48
UBXN1-211ENST00000531056 RAB5BP61020 215 aa12.06□□□□□ -0.48
UBXN1-211ENST00000531056 CARD19Q96LW7 228 aa12.06□□□□□ -0.48
UBXN1-211ENST00000531056 CYSLTR1Q9Y271 337 aa12.06□□□□□ -0.48
UBXN1-211ENST00000531056 IGLV4-3A0A075B6K6 122 aa12.05□□□□□ -0.48
UBXN1-211ENST00000531056 A0A087WYN8 130 aa12.05□□□□□ -0.48
UBXN1-211ENST00000531056 ZNF561-AS1K7EIQ3 104 aa12.05□□□□□ -0.48
UBXN1-211ENST00000531056 C2orf66Q6UXQ4 117 aa12.05□□□□□ -0.48
UBXN1-211ENST00000531056 C5orf38Q86SI9 138 aa12.05□□□□□ -0.48
UBXN1-211ENST00000531056 IFITM10A6NMD0 228 aa12.04□□□□□ -0.48
UBXN1-211ENST00000531056 LINC00614P0C842 121 aa12.04□□□□□ -0.48
UBXN1-211ENST00000531056 RPL37AP61513 92 aaKnown RBP12.04□□□□□ -0.48
UBXN1-211ENST00000531056 PLAC8Q9NZF1 115 aa12.04□□□□□ -0.48
UBXN1-211ENST00000531056 IGLV4-69A0A075B6H9 119 aa12.03□□□□□ -0.48
UBXN1-211ENST00000531056 IGHV3OR16-9A0A0B4J2B5 98 aa12.03□□□□□ -0.48
UBXN1-211ENST00000531056 LINC01549A6NIU2 74 aa12.03□□□□□ -0.48
UBXN1-211ENST00000531056 SYCNQ0VAF6 134 aa12.03□□□□□ -0.48
UBXN1-211ENST00000531056 A0A096LNI7 61 aa12.02□□□□□ -0.49
UBXN1-211ENST00000531056 TMEM141Q96I45 108 aa12.02□□□□□ -0.49
UBXN1-211ENST00000531056 IGKV2-24A0A0C4DH68 120 aa12.01□□□□□ -0.49
UBXN1-211ENST00000531056 APOMO95445 188 aa12.01□□□□□ -0.49
UBXN1-211ENST00000531056 Q6ZRU5 148 aa12.01□□□□□ -0.49
UBXN1-211ENST00000531056 DPH3Q96FX2 82 aa12.01□□□□□ -0.49
UBXN1-211ENST00000531056 URB1-AS1Q96HZ7 61 aa12.01□□□□□ -0.49
UBXN1-211ENST00000531056 MAJINQ3KP22 176 aa12□□□□□ -0.49
UBXN1-211ENST00000531056 BAGE3Q86Y29 109 aa12□□□□□ -0.49
UBXN1-211ENST00000531056 OR10D4PQ8NGN7 298 aa12□□□□□ -0.49
UBXN1-211ENST00000531056 TOMM6Q96B49 74 aa12□□□□□ -0.49
UBXN1-211ENST00000531056 C2orf48Q96LS8 159 aa12□□□□□ -0.49
UBXN1-211ENST00000531056 PKIGQ9Y2B9 76 aa12□□□□□ -0.49
UBXN1-211ENST00000531056 PKHD1L1Q86WI1 4243 aa12□□□□□ -0.49
UBXN1-211ENST00000531056 NPSP0C0P6 89 aa11.99□□□□□ -0.49
UBXN1-211ENST00000531056 SPAG11BQ08648 103 aa11.99□□□□□ -0.49
UBXN1-211ENST00000531056 LINC00173Q6ZV60 143 aa11.99□□□□□ -0.49
UBXN1-211ENST00000531056 CHCHD1Q96BP2 118 aaKnown RBP11.99□□□□□ -0.49
UBXN1-211ENST00000531056 LINC00242Q5T6M2 205 aa11.98□□□□□ -0.49
UBXN1-211ENST00000531056 Q6ZN92 141 aa11.98□□□□□ -0.49
UBXN1-211ENST00000531056 TEX43Q6ZNM6 134 aa11.98□□□□□ -0.49
UBXN1-211ENST00000531056 CAMK2N2Q96S95 79 aa11.98□□□□□ -0.49
UBXN1-211ENST00000531056 IGIPA6NJ69 53 aa11.97□□□□□ -0.49
UBXN1-211ENST00000531056 UBE2D1P51668 147 aa11.97□□□□□ -0.49
UBXN1-211ENST00000531056 HNRNPA3P51991 378 aaKnown RBP11.97□□□□□ -0.49
UBXN1-211ENST00000531056 ORAOV1Q8WV07 137 aa11.97□□□□□ -0.49
UBXN1-211ENST00000531056 AMELXQ99217 191 aa11.97□□□□□ -0.49
UBXN1-211ENST00000531056 TIMM17AQ99595 171 aa11.97□□□□□ -0.49
UBXN1-211ENST00000531056 LINC00474Q9P2X8 69 aa11.97□□□□□ -0.49
UBXN1-211ENST00000531056 DMBT1Q9UGM3 2413 aaPredicted RBP11.97□□□□□ -0.49
UBXN1-211ENST00000531056 HBDP02042 147 aa11.96□□□□□ -0.49
UBXN1-211ENST00000531056 PAPPA-AS1Q5QFB9 102 aa11.96□□□□□ -0.49
UBXN1-211ENST00000531056 ZC2HC1BQ5TFG8 222 aa11.96□□□□□ -0.49
UBXN1-211ENST00000531056 ERASQ7Z444 233 aa11.96□□□□□ -0.49
UBXN1-211ENST00000531056 STPG4Q8N801 248 aa11.96□□□□□ -0.49
UBXN1-211ENST00000531056 SCGB3A1Q96QR1 104 aa11.96□□□□□ -0.49
UBXN1-211ENST00000531056 A0A087WZ39 114 aa11.95□□□□□ -0.5
UBXN1-211ENST00000531056 LOC107984640A0A0U1RRK4 108 aa11.95□□□□□ -0.5
UBXN1-211ENST00000531056 KRTAP29-1A8MX34 341 aaPredicted RBP11.95□□□□□ -0.5
UBXN1-211ENST00000531056 HSBP1O75506 76 aa11.95□□□□□ -0.5
UBXN1-211ENST00000531056 C2orf88Q9BSF0 95 aa11.95□□□□□ -0.5
UBXN1-211ENST00000531056 PTTG1IPP53801 180 aa11.94□□□□□ -0.5
UBXN1-211ENST00000531056 A0A096LNJ9 63 aa11.93□□□□□ -0.5
UBXN1-211ENST00000531056 F8WDY8 70 aa11.93□□□□□ -0.5
UBXN1-211ENST00000531056 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.93□□□□□ -0.5
UBXN1-211ENST00000531056 HIST1H2BKO60814 126 aa11.93□□□□□ -0.5
UBXN1-211ENST00000531056 HIST1H2BJP06899 126 aa11.93□□□□□ -0.5
UBXN1-211ENST00000531056 HIST1H2BOP23527 126 aa11.93□□□□□ -0.5
UBXN1-211ENST00000531056 HIST1H2BBP33778 126 aa11.93□□□□□ -0.5
UBXN1-211ENST00000531056 HIST1H2BDP58876 126 aa11.93□□□□□ -0.5
UBXN1-211ENST00000531056 HIST1H2BCP62807 126 aa11.93□□□□□ -0.5
UBXN1-211ENST00000531056 PMCHL1Q16048 86 aa11.93□□□□□ -0.5
UBXN1-211ENST00000531056 HIST2H2BEQ16778 126 aa11.93□□□□□ -0.5
UBXN1-211ENST00000531056 RNF151Q2KHN1 245 aa11.93□□□□□ -0.5
UBXN1-211ENST00000531056 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.93□□□□□ -0.5
UBXN1-211ENST00000531056 FAM19A3Q7Z5A8 133 aa11.93□□□□□ -0.5
UBXN1-211ENST00000531056 HIST1H2BHQ93079 126 aa11.93□□□□□ -0.5
UBXN1-211ENST00000531056 HIST1H2BNQ99877 126 aa11.93□□□□□ -0.5
UBXN1-211ENST00000531056 HIST1H2BMQ99879 126 aa11.93□□□□□ -0.5
UBXN1-211ENST00000531056 VCX2Q9H322 139 aa11.93□□□□□ -0.5
UBXN1-211ENST00000531056 SERF1AO75920 110 aa11.92□□□□□ -0.5
UBXN1-211ENST00000531056 MRPL35Q9NZE8 188 aaKnown RBP11.92□□□□□ -0.5
UBXN1-211ENST00000531056 HERC1Q15751 4861 aa11.92□□□□□ -0.5
UBXN1-211ENST00000531056 GAGE2BQ13066 116 aa11.91□□□□□ -0.5
UBXN1-211ENST00000531056 KIAA0087Q14695 138 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms