RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 TRBV7-6A0A0J9YX20 115 aa10.09□□□□□ -0.79
PCF11-204ENST00000530660 OVOL2Q9BRP0 275 aa10.09□□□□□ -0.79
PCF11-204ENST00000530660 PF4P02776 101 aa10.08□□□□□ -0.8
PCF11-204ENST00000530660 DEFB123Q8N688 67 aa10.08□□□□□ -0.8
PCF11-204ENST00000530660 MPLKIPQ8TAP9 179 aa10.08□□□□□ -0.8
PCF11-204ENST00000530660 Q6ZTI0 123 aa10.07□□□□□ -0.8
PCF11-204ENST00000530660 TRAV10A0A0B4J240 114 aa10.07□□□□□ -0.8
PCF11-204ENST00000530660 TLN1Q9Y490 2541 aaKnown RBP10.07□□□□□ -0.8
PCF11-204ENST00000530660 TRAV7A0A075B6U4 112 aa10.07□□□□□ -0.8
PCF11-204ENST00000530660 ORMDL1Q9P0S3 153 aa10.07□□□□□ -0.8
PCF11-204ENST00000530660 MAP1AP78559 2803 aaPredicted RBP10.06□□□□□ -0.8
PCF11-204ENST00000530660 KLKP1Q107X0 134 aa10.06□□□□□ -0.8
PCF11-204ENST00000530660 S100A7L2Q5SY68 101 aa10.06□□□□□ -0.8
PCF11-204ENST00000530660 IL17DQ8TAD2 202 aa10.06□□□□□ -0.8
PCF11-204ENST00000530660 NOTCH3Q9UM47 2321 aa10.06□□□□□ -0.8
PCF11-204ENST00000530660 H0YGX0 51 aa10.06□□□□□ -0.8
PCF11-204ENST00000530660 CRYBG3Q68DQ2 2970 aa10.05□□□□□ -0.8
PCF11-204ENST00000530660 CSMD2Q7Z408 3487 aa10.05□□□□□ -0.8
PCF11-204ENST00000530660 C19orf54Q5BKX5 351 aa10.05□□□□□ -0.8
PCF11-204ENST00000530660 ATP5EP2Q5VTU8 51 aa10.05□□□□□ -0.8
PCF11-204ENST00000530660 Q96MF0 132 aa10.05□□□□□ -0.8
PCF11-204ENST00000530660 RNASE1P07998 156 aaKnown RBP10.04□□□□□ -0.8
PCF11-204ENST00000530660 FAM229BQ4G0N7 80 aa10.04□□□□□ -0.8
PCF11-204ENST00000530660 C11orf71Q6IPW1 123 aa10.04□□□□□ -0.8
PCF11-204ENST00000530660 NBL1P41271 181 aa10.03□□□□□ -0.8
PCF11-204ENST00000530660 LINC00158P58513 81 aa10.03□□□□□ -0.8
PCF11-204ENST00000530660 UBL5Q9BZL1 73 aa10.03□□□□□ -0.8
PCF11-204ENST00000530660 TOMM7Q9P0U1 55 aa10.03□□□□□ -0.8
PCF11-204ENST00000530660 MOB4Q9Y3A3 225 aa10.02□□□□□ -0.8
PCF11-204ENST00000530660 CCL18P55774 89 aa10.02□□□□□ -0.81
PCF11-204ENST00000530660 BLCAPP62952 87 aa10.02□□□□□ -0.81
PCF11-204ENST00000530660 TTC28Q96AY4 2481 aa10.02□□□□□ -0.81
PCF11-204ENST00000530660 LY6EQ16553 131 aa10□□□□□ -0.81
PCF11-204ENST00000530660 BRD3OSQ6XYD6 125 aa10□□□□□ -0.81
PCF11-204ENST00000530660 RIF1Q5UIP0 2472 aaKnown RBP10□□□□□ -0.81
PCF11-204ENST00000530660 PAX4O43316 350 aa10□□□□□ -0.81
PCF11-204ENST00000530660 VPS13CQ709C8 3753 aa9.99□□□□□ -0.81
PCF11-204ENST00000530660 HAMPP81172 84 aa9.99□□□□□ -0.81
PCF11-204ENST00000530660 TRBV10-3A0A0K0K1G6 114 aa9.98□□□□□ -0.81
PCF11-204ENST00000530660 TM2D3Q9BRN9 247 aa9.98□□□□□ -0.81
PCF11-204ENST00000530660 M0R2N4 97 aa9.97□□□□□ -0.81
PCF11-204ENST00000530660 ZNF292O60281 2723 aa9.97□□□□□ -0.81
PCF11-204ENST00000530660 PRB1P04280 392 aa9.97□□□□□ -0.81
PCF11-204ENST00000530660 A0A1W2PPR1 153 aa9.97□□□□□ -0.81
PCF11-204ENST00000530660 JMJD7-PLA2G4BH0Y9G9 81 aa9.97□□□□□ -0.81
PCF11-204ENST00000530660 USMG5Q96IX5 58 aa9.97□□□□□ -0.81
PCF11-204ENST00000530660 LINC01547P58512 204 aaPredicted RBP9.96□□□□□ -0.82
PCF11-204ENST00000530660 C11orf68Q9H3H3 251 aaKnown RBP9.96□□□□□ -0.82
PCF11-204ENST00000530660 SNRPD3P62318 126 aaKnown RBP9.95□□□□□ -0.82
PCF11-204ENST00000530660 CFHR3Q02985 330 aa9.95□□□□□ -0.82
PCF11-204ENST00000530660 IGKV3OR2-268A0A0C4DH90 116 aa9.95□□□□□ -0.82
PCF11-204ENST00000530660 LMO4P61968 165 aa9.95□□□□□ -0.82
PCF11-204ENST00000530660 FBXL19-AS1Q494R0 122 aa9.95□□□□□ -0.82
PCF11-204ENST00000530660 COX7B2Q8TF08 81 aa9.94□□□□□ -0.82
PCF11-204ENST00000530660 ZFHX2Q9C0A1 2572 aaPredicted RBP9.94□□□□□ -0.82
PCF11-204ENST00000530660 IGHV3-53P01767 116 aa9.94□□□□□ -0.82
PCF11-204ENST00000530660 MIFP14174 115 aa9.93□□□□□ -0.82
PCF11-204ENST00000530660 PRR3P79522 188 aaKnown RBP9.93□□□□□ -0.82
PCF11-204ENST00000530660 Q8N3U1 123 aa9.92□□□□□ -0.82
PCF11-204ENST00000530660 Q8N814 137 aa9.92□□□□□ -0.82
PCF11-204ENST00000530660 NTM-AS1Q6ZSK4 140 aa9.92□□□□□ -0.82
PCF11-204ENST00000530660 CDC42SE2Q9NRR3 84 aa9.92□□□□□ -0.82
PCF11-204ENST00000530660 CEP295Q9C0D2 2601 aa9.92□□□□□ -0.82
PCF11-204ENST00000530660 A0A087WZ39 114 aa9.92□□□□□ -0.82
PCF11-204ENST00000530660 SCXQ7RTU7 201 aa9.92□□□□□ -0.82
PCF11-204ENST00000530660 A0A096LNT2 108 aa9.91□□□□□ -0.82
PCF11-204ENST00000530660 K7EQG2 157 aa9.91□□□□□ -0.82
PCF11-204ENST00000530660 TMEM256-PLSCR3K7ERE1 68 aa9.91□□□□□ -0.82
PCF11-204ENST00000530660 ADORA2A-AS1P86434 159 aa9.91□□□□□ -0.82
PCF11-204ENST00000530660 FAM19A3Q7Z5A8 133 aa9.91□□□□□ -0.82
PCF11-204ENST00000530660 BCE1O60756 84 aa9.9□□□□□ -0.82
PCF11-204ENST00000530660 TRBV7-4A0A0J9YYF1 115 aa9.9□□□□□ -0.82
PCF11-204ENST00000530660 TRBV6-4A0A1B0GX49 114 aa9.9□□□□□ -0.82
PCF11-204ENST00000530660 H3BUX3 64 aa9.9□□□□□ -0.82
PCF11-204ENST00000530660 C19orf84I3L1E1 186 aa9.9□□□□□ -0.82
PCF11-204ENST00000530660 Q6ZVQ6 151 aa9.9□□□□□ -0.83
PCF11-204ENST00000530660 ABCA2Q9BZC7 2435 aa9.89□□□□□ -0.83
PCF11-204ENST00000530660 H3BUA1 57 aa9.89□□□□□ -0.83
PCF11-204ENST00000530660 K7EMT4 169 aa9.89□□□□□ -0.83
PCF11-204ENST00000530660 PMAIP1Q13794 54 aa9.89□□□□□ -0.83
PCF11-204ENST00000530660 ZNF843Q8N446 348 aa9.89□□□□□ -0.83
PCF11-204ENST00000530660 NDUFC1O43677 76 aa9.88□□□□□ -0.83
PCF11-204ENST00000530660 IGLV1-40P01703 118 aa9.88□□□□□ -0.83
PCF11-204ENST00000530660 IGHV4-38-2P0DP08 117 aa9.88□□□□□ -0.83
PCF11-204ENST00000530660 C10orf99Q6UWK7 81 aa9.88□□□□□ -0.83
PCF11-204ENST00000530660 Q6ZQT0 140 aa9.88□□□□□ -0.83
PCF11-204ENST00000530660 LINC00167Q96N53 147 aa9.88□□□□□ -0.83
PCF11-204ENST00000530660 CSPG4Q6UVK1 2322 aa9.88□□□□□ -0.83
PCF11-204ENST00000530660 ATRXP46100 2492 aa9.87□□□□□ -0.83
PCF11-204ENST00000530660 NANOS2P60321 138 aaKnown RBP9.87□□□□□ -0.83
PCF11-204ENST00000530660 TMEM254Q8TBM7 123 aa9.87□□□□□ -0.83
PCF11-204ENST00000530660 LY6G6DO95868 133 aa9.86□□□□□ -0.83
PCF11-204ENST00000530660 LRCOL1A6NCL2 159 aa9.85□□□□□ -0.83
PCF11-204ENST00000530660 TRBV10-1A0A0K0K1A3 114 aa9.85□□□□□ -0.83
PCF11-204ENST00000530660 ATP5EP56381 51 aaPredicted RBP9.85□□□□□ -0.83
PCF11-204ENST00000530660 K7EQD1 137 aa9.85□□□□□ -0.83
PCF11-204ENST00000530660 NREPQ16612 68 aa9.85□□□□□ -0.83
PCF11-204ENST00000530660 A6NDX4 124 aa9.84□□□□□ -0.83
PCF11-204ENST00000530660 IBA57-AS1B1ANH7 110 aa9.84□□□□□ -0.83
PCF11-204ENST00000530660 ESRGQ1W209 222 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms