RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 NUP35Q8NFH5 326 aa3.62□□□□□ -1.83
NUP98-215ENST00000529063 SMIM12Q96EX1 92 aa3.62□□□□□ -1.83
NUP98-215ENST00000529063 GNG13Q9P2W3 67 aa3.62□□□□□ -1.83
NUP98-215ENST00000529063 IGLV4-69A0A075B6H9 119 aa3.61□□□□□ -1.83
NUP98-215ENST00000529063 K7EN84 100 aa3.61□□□□□ -1.83
NUP98-215ENST00000529063 GNG4P50150 75 aa3.61□□□□□ -1.83
NUP98-215ENST00000529063 C1orf137Q5JT78 98 aa3.61□□□□□ -1.83
NUP98-215ENST00000529063 ZNF664Q8N3J9 261 aa3.61□□□□□ -1.83
NUP98-215ENST00000529063 RNASE7Q9H1E1 156 aaKnown RBP3.61□□□□□ -1.83
NUP98-215ENST00000529063 MANBALQ9NQG1 85 aa3.61□□□□□ -1.83
NUP98-215ENST00000529063 CDC42SE2Q9NRR3 84 aa3.61□□□□□ -1.83
NUP98-215ENST00000529063 TMEM242Q9NWH2 141 aa3.61□□□□□ -1.83
NUP98-215ENST00000529063 PKIGQ9Y2B9 76 aa3.61□□□□□ -1.83
NUP98-215ENST00000529063 TRAV1-1A0A0B4J248 108 aa3.6□□□□□ -1.83
NUP98-215ENST00000529063 TRBV6-5A0A0K0K1A5 114 aa3.6□□□□□ -1.83
NUP98-215ENST00000529063 PCP4L1A6NKN8 68 aa3.6□□□□□ -1.83
NUP98-215ENST00000529063 H0Y9J4 135 aa3.6□□□□□ -1.83
NUP98-215ENST00000529063 BCL2L11O43521 198 aa3.6□□□□□ -1.83
NUP98-215ENST00000529063 APOMO95445 188 aa3.6□□□□□ -1.83
NUP98-215ENST00000529063 MT-ND6P03923 174 aa3.6□□□□□ -1.83
NUP98-215ENST00000529063 IGLV7-43P04211 117 aa3.6□□□□□ -1.83
NUP98-215ENST00000529063 MRPL52Q86TS9 123 aaKnown RBP3.6□□□□□ -1.83
NUP98-215ENST00000529063 KRTAP7-1Q8IUC3 87 aa3.6□□□□□ -1.83
NUP98-215ENST00000529063 FAM168BA1KXE4 195 aa3.59□□□□□ -1.83
NUP98-215ENST00000529063 I3L3M4 83 aa3.59□□□□□ -1.83
NUP98-215ENST00000529063 RPL18AQ02543 176 aaKnown RBP3.59□□□□□ -1.83
NUP98-215ENST00000529063 FAM74A3Q4VXF1 159 aa3.59□□□□□ -1.83
NUP98-215ENST00000529063 RNASE13Q5GAN3 156 aaKnown RBP3.59□□□□□ -1.83
NUP98-215ENST00000529063 MRAP2Q96G30 205 aa3.59□□□□□ -1.83
NUP98-215ENST00000529063 TMEM101Q96IK0 257 aa3.59□□□□□ -1.83
NUP98-215ENST00000529063 OPRPNQ99935 248 aaPredicted RBP3.59□□□□□ -1.83
NUP98-215ENST00000529063 RPP21Q9H633 154 aaKnown RBP3.59□□□□□ -1.83
NUP98-215ENST00000529063 HMSDA8MTL9 139 aa3.58□□□□□ -1.84
NUP98-215ENST00000529063 PDE6DO43924 150 aa3.58□□□□□ -1.84
NUP98-215ENST00000529063 PMCHP20382 165 aa3.58□□□□□ -1.84
NUP98-215ENST00000529063 POLR2KP53803 58 aaKnown RBP3.58□□□□□ -1.84
NUP98-215ENST00000529063 EIF5AP63241 154 aaKnown RBP3.58□□□□□ -1.84
NUP98-215ENST00000529063 SS18Q15532 418 aa3.58□□□□□ -1.84
NUP98-215ENST00000529063 EIF5AL1Q6IS14 154 aaKnown RBP3.58□□□□□ -1.84
NUP98-215ENST00000529063 DIRC1Q969H9 104 aa3.58□□□□□ -1.84
NUP98-215ENST00000529063 ISOC2Q96AB3 205 aa3.58□□□□□ -1.84
NUP98-215ENST00000529063 BTF3L4Q96K17 158 aa3.58□□□□□ -1.84
NUP98-215ENST00000529063 CAMK2N2Q96S95 79 aa3.58□□□□□ -1.84
NUP98-215ENST00000529063 MED9Q9NWA0 146 aa3.58□□□□□ -1.84
NUP98-215ENST00000529063 IGLV1-50A0A075B6I6 118 aa3.57□□□□□ -1.84
NUP98-215ENST00000529063 TRBV27A0A0K0K1C4 114 aa3.57□□□□□ -1.84
NUP98-215ENST00000529063 KANTRA0A1W2PQU2 76 aa3.57□□□□□ -1.84
NUP98-215ENST00000529063 C7orf77A4D0Y5 90 aa3.57□□□□□ -1.84
NUP98-215ENST00000529063 COX7A2LO14548 114 aa3.57□□□□□ -1.84
NUP98-215ENST00000529063 SPAG11BQ08648 103 aa3.57□□□□□ -1.84
NUP98-215ENST00000529063 PRR4Q16378 134 aa3.57□□□□□ -1.84
NUP98-215ENST00000529063 ADAMTSL4-AS1Q5T5F5 129 aa3.57□□□□□ -1.84
NUP98-215ENST00000529063 TEX261Q6UWH6 196 aa3.57□□□□□ -1.84
NUP98-215ENST00000529063 Q6ZUT4 128 aa3.57□□□□□ -1.84
NUP98-215ENST00000529063 C5orf38Q86SI9 138 aa3.57□□□□□ -1.84
NUP98-215ENST00000529063 FAM104AQ969W3 186 aa3.57□□□□□ -1.84
NUP98-215ENST00000529063 ST20Q9HBF5 79 aa3.57□□□□□ -1.84
NUP98-215ENST00000529063 UBE2D4Q9Y2X8 147 aa3.57□□□□□ -1.84
NUP98-215ENST00000529063 PYGO1Q9Y3Y4 419 aa3.57□□□□□ -1.84
NUP98-215ENST00000529063 IGKV2D-30A0A075B6S6 120 aa3.56□□□□□ -1.84
NUP98-215ENST00000529063 C1orf196B1AJZ1 125 aa3.56□□□□□ -1.84
NUP98-215ENST00000529063 SMKR1H3BMG3 65 aa3.56□□□□□ -1.84
NUP98-215ENST00000529063 FAM19A5Q7Z5A7 132 aaPredicted RBP3.56□□□□□ -1.84
NUP98-215ENST00000529063 BIN3Q9NQY0 253 aa3.56□□□□□ -1.84
NUP98-215ENST00000529063 MRPL35Q9NZE8 188 aaKnown RBP3.56□□□□□ -1.84
NUP98-215ENST00000529063 TRAV13-1A0A0B4J241 112 aa3.55□□□□□ -1.84
NUP98-215ENST00000529063 A0A0U1RQV1 116 aa3.55□□□□□ -1.84
NUP98-215ENST00000529063 TLX1NBP0CAT3 122 aa3.55□□□□□ -1.84
NUP98-215ENST00000529063 RAB4AP20338 218 aa3.55□□□□□ -1.84
NUP98-215ENST00000529063 FAM231DQ6ZW35 169 aa3.55□□□□□ -1.84
NUP98-215ENST00000529063 SMIM15Q7Z3B0 74 aa3.55□□□□□ -1.84
NUP98-215ENST00000529063 AMN1Q8IY45 258 aa3.55□□□□□ -1.84
NUP98-215ENST00000529063 OR10D4PQ8NGN7 298 aa3.55□□□□□ -1.84
NUP98-215ENST00000529063 FAM210AQ96ND0 272 aa3.55□□□□□ -1.84
NUP98-215ENST00000529063 TMEM191AQ9H0A3 160 aa3.55□□□□□ -1.84
NUP98-215ENST00000529063 C6orf48Q9UBA6 75 aa3.55□□□□□ -1.84
NUP98-215ENST00000529063 CSDC2Q9Y534 153 aaKnown RBP3.55□□□□□ -1.84
NUP98-215ENST00000529063 IGHV3OR16-9A0A0B4J2B5 98 aa3.54□□□□□ -1.84
NUP98-215ENST00000529063 M0QXV9 152 aa3.54□□□□□ -1.84
NUP98-215ENST00000529063 GATCO43716 136 aaKnown RBP3.54□□□□□ -1.84
NUP98-215ENST00000529063 UNQ6190/PRO20217Q6UXQ8 127 aa3.54□□□□□ -1.84
NUP98-215ENST00000529063 ORAOV1Q8WV07 137 aa3.54□□□□□ -1.84
NUP98-215ENST00000529063 SMDT1Q9H4I9 107 aa3.54□□□□□ -1.84
NUP98-215ENST00000529063 A0A087X002 238 aa3.53□□□□□ -1.84
NUP98-215ENST00000529063 HIGD1CA8MV81 97 aa3.53□□□□□ -1.84
NUP98-215ENST00000529063 A8MWL6 223 aa3.53□□□□□ -1.84
NUP98-215ENST00000529063 TEX46H3BTG2 121 aa3.53□□□□□ -1.84
NUP98-215ENST00000529063 RPL13AP40429 203 aaKnown RBP3.53□□□□□ -1.84
NUP98-215ENST00000529063 UBE2D1P51668 147 aa3.53□□□□□ -1.84
NUP98-215ENST00000529063 SEC61GP60059 68 aa3.53□□□□□ -1.84
NUP98-215ENST00000529063 RPL39P62891 51 aaKnown RBP3.53□□□□□ -1.84
NUP98-215ENST00000529063 KIAA0087Q14695 138 aa3.53□□□□□ -1.84
NUP98-215ENST00000529063 RGS21Q2M5E4 152 aa3.53□□□□□ -1.84
NUP98-215ENST00000529063 C9orf129Q5T035 196 aaKnown RBP3.53□□□□□ -1.84
NUP98-215ENST00000529063 Q8N9P0 234 aaPredicted RBP3.53□□□□□ -1.84
NUP98-215ENST00000529063 TIMM21Q9BVV7 248 aa3.53□□□□□ -1.84
NUP98-215ENST00000529063 A0A1B0GUT8 65 aa3.52□□□□□ -1.85
NUP98-215ENST00000529063 TMEM250H0YL14 139 aa3.52□□□□□ -1.85
NUP98-215ENST00000529063 NDUFA1O15239 70 aa3.52□□□□□ -1.85
NUP98-215ENST00000529063 TSPAN13O95857 204 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms