RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 CHCHD10Q8WYQ3 142 aaPredicted RBP8.43□□□□□ -1.06
SCN3B-205ENST00000528267 C16orf90A8MZG2 172 aa8.42□□□□□ -1.06
SCN3B-205ENST00000528267 USP17L23D6RBM5 183 aa8.42□□□□□ -1.06
SCN3B-205ENST00000528267 MRPS36P82909 103 aaKnown RBP8.42□□□□□ -1.06
SCN3B-205ENST00000528267 SPANXA1Q9NS26 97 aa8.42□□□□□ -1.06
SCN3B-205ENST00000528267 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.41□□□□□ -1.06
SCN3B-205ENST00000528267 IGIPA6NJ69 53 aa8.41□□□□□ -1.06
SCN3B-205ENST00000528267 CCL25O15444 150 aa8.41□□□□□ -1.06
SCN3B-205ENST00000528267 G0S2P27469 103 aa8.41□□□□□ -1.06
SCN3B-205ENST00000528267 DGAT2L7PQ6IED9 249 aa8.41□□□□□ -1.06
SCN3B-205ENST00000528267 LINC00518Q8N0U6 118 aa8.41□□□□□ -1.06
SCN3B-205ENST00000528267 C15orf56Q8N910 161 aa8.41□□□□□ -1.06
SCN3B-205ENST00000528267 MAP1LC3CQ9BXW4 147 aa8.41□□□□□ -1.06
SCN3B-205ENST00000528267 PYGO1Q9Y3Y4 419 aa8.41□□□□□ -1.06
SCN3B-205ENST00000528267 SCGB1D1O95968 90 aa8.4□□□□□ -1.06
SCN3B-205ENST00000528267 PRSS1P07477 247 aa8.4□□□□□ -1.06
SCN3B-205ENST00000528267 XCL1P47992 114 aa8.4□□□□□ -1.06
SCN3B-205ENST00000528267 KRTAP10-1P60331 282 aa8.4□□□□□ -1.06
SCN3B-205ENST00000528267 TOMM6Q96B49 74 aa8.4□□□□□ -1.06
SCN3B-205ENST00000528267 C12orf57Q99622 126 aa8.4□□□□□ -1.06
SCN3B-205ENST00000528267 CYSLTR1Q9Y271 337 aa8.4□□□□□ -1.06
SCN3B-205ENST00000528267 PCLOQ9Y6V0 5065 aa8.39□□□□□ -1.07
SCN3B-205ENST00000528267 TRAV13-1A0A0B4J241 112 aa8.39□□□□□ -1.07
SCN3B-205ENST00000528267 LINC01549A6NIU2 74 aa8.39□□□□□ -1.07
SCN3B-205ENST00000528267 SYS1-DBNDD2H3BUS1 97 aa8.39□□□□□ -1.07
SCN3B-205ENST00000528267 EREGO14944 169 aa8.39□□□□□ -1.07
SCN3B-205ENST00000528267 ATP5LO75964 103 aa8.39□□□□□ -1.07
SCN3B-205ENST00000528267 LINC01620Q4KN68 170 aa8.39□□□□□ -1.07
SCN3B-205ENST00000528267 IFI27L1Q96BM0 104 aa8.39□□□□□ -1.07
SCN3B-205ENST00000528267 SLPIP03973 132 aa8.38□□□□□ -1.07
SCN3B-205ENST00000528267 PET117Q6UWS5 81 aa8.38□□□□□ -1.07
SCN3B-205ENST00000528267 SCGB3A1Q96QR1 104 aa8.38□□□□□ -1.07
SCN3B-205ENST00000528267 AMELXQ99217 191 aa8.38□□□□□ -1.07
SCN3B-205ENST00000528267 PGPEP1Q9NXJ5 209 aa8.38□□□□□ -1.07
SCN3B-205ENST00000528267 FAT1Q14517 4588 aa8.38□□□□□ -1.07
SCN3B-205ENST00000528267 IGLV5-52A0A0A0MRZ9 124 aa8.37□□□□□ -1.07
SCN3B-205ENST00000528267 C20orf202A1L168 122 aa8.37□□□□□ -1.07
SCN3B-205ENST00000528267 H0Y8G0 127 aa8.37□□□□□ -1.07
SCN3B-205ENST00000528267 CDPF1Q6NVV7 123 aa8.37□□□□□ -1.07
SCN3B-205ENST00000528267 TMEM141Q96I45 108 aa8.37□□□□□ -1.07
SCN3B-205ENST00000528267 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.36□□□□□ -1.07
SCN3B-205ENST00000528267 SMAGPQ0VAQ4 97 aa8.36□□□□□ -1.07
SCN3B-205ENST00000528267 SS18Q15532 418 aa8.36□□□□□ -1.07
SCN3B-205ENST00000528267 CD164L2Q6UWJ8 174 aa8.36□□□□□ -1.07
SCN3B-205ENST00000528267 ERASQ7Z444 233 aa8.36□□□□□ -1.07
SCN3B-205ENST00000528267 TIMM17AQ99595 171 aa8.36□□□□□ -1.07
SCN3B-205ENST00000528267 UBE2D1P51668 147 aa8.35□□□□□ -1.07
SCN3B-205ENST00000528267 COX6A2Q02221 97 aa8.35□□□□□ -1.07
SCN3B-205ENST00000528267 HIGD2BQ4VC39 106 aa8.35□□□□□ -1.07
SCN3B-205ENST00000528267 LINC00242Q5T6M2 205 aa8.35□□□□□ -1.07
SCN3B-205ENST00000528267 Q6ZN92 141 aa8.35□□□□□ -1.07
SCN3B-205ENST00000528267 IGHV3OR16-9A0A0B4J2B5 98 aa8.34□□□□□ -1.07
SCN3B-205ENST00000528267 GCSHP23434 173 aa8.34□□□□□ -1.07
SCN3B-205ENST00000528267 LINC01545Q5VT33 79 aa8.34□□□□□ -1.07
SCN3B-205ENST00000528267 C5orf38Q86SI9 138 aa8.34□□□□□ -1.07
SCN3B-205ENST00000528267 FAM30AQ9NZY2 134 aa8.34□□□□□ -1.07
SCN3B-205ENST00000528267 GVQW2A0A096LPI5 108 aaPredicted RBP8.33□□□□□ -1.08
SCN3B-205ENST00000528267 NPSP0C0P6 89 aa8.33□□□□□ -1.08
SCN3B-205ENST00000528267 S100A12P80511 92 aa8.33□□□□□ -1.08
SCN3B-205ENST00000528267 TEX43Q6ZNM6 134 aa8.33□□□□□ -1.08
SCN3B-205ENST00000528267 LINC00526Q96FQ7 95 aa8.33□□□□□ -1.08
SCN3B-205ENST00000528267 hDV102S1A0JD36 115 aa8.32□□□□□ -1.08
SCN3B-205ENST00000528267 HAMPP81172 84 aa8.32□□□□□ -1.08
SCN3B-205ENST00000528267 C14orf177Q52M58 125 aa8.32□□□□□ -1.08
SCN3B-205ENST00000528267 FAM19A3Q7Z5A8 133 aa8.32□□□□□ -1.08
SCN3B-205ENST00000528267 PMCHL2Q9BQD1 86 aa8.32□□□□□ -1.08
SCN3B-205ENST00000528267 TRAV12-1A0A0B4J245 112 aa8.31□□□□□ -1.08
SCN3B-205ENST00000528267 XGP55808 180 aa8.31□□□□□ -1.08
SCN3B-205ENST00000528267 CNBPP62633 177 aaKnown RBP8.31□□□□□ -1.08
SCN3B-205ENST00000528267 ATOH7Q8N100 152 aa8.31□□□□□ -1.08
SCN3B-205ENST00000528267 IGHV1-58A0A0C4DH39 117 aa8.3□□□□□ -1.08
SCN3B-205ENST00000528267 COX7A2LO14548 114 aa8.3□□□□□ -1.08
SCN3B-205ENST00000528267 ODF1Q14990 250 aa8.3□□□□□ -1.08
SCN3B-205ENST00000528267 VAMP8Q9BV40 100 aa8.3□□□□□ -1.08
SCN3B-205ENST00000528267 VCX2Q9H322 139 aa8.3□□□□□ -1.08
SCN3B-205ENST00000528267 A0A0J9YXV3 536 aa8.29□□□□□ -1.08
SCN3B-205ENST00000528267 PMVKQ15126 192 aa8.29□□□□□ -1.08
SCN3B-205ENST00000528267 PAPPA-AS1Q5QFB9 102 aa8.29□□□□□ -1.08
SCN3B-205ENST00000528267 Q6ZSA8 131 aa8.29□□□□□ -1.08
SCN3B-205ENST00000528267 C9orf163Q8N9P6 203 aa8.29□□□□□ -1.08
SCN3B-205ENST00000528267 C2orf88Q9BSF0 95 aa8.29□□□□□ -1.08
SCN3B-205ENST00000528267 A0A087WZ39 114 aa8.28□□□□□ -1.08
SCN3B-205ENST00000528267 PANO1I0J062 215 aa8.28□□□□□ -1.08
SCN3B-205ENST00000528267 CDK2AP2O75956 126 aa8.28□□□□□ -1.08
SCN3B-205ENST00000528267 CST9LQ9H4G1 147 aa8.28□□□□□ -1.08
SCN3B-205ENST00000528267 CHTOPQ9Y3Y2 248 aaKnown RBP8.28□□□□□ -1.08
SCN3B-205ENST00000528267 IGLV4-69A0A075B6H9 119 aa8.27□□□□□ -1.09
SCN3B-205ENST00000528267 IGHV3-64A0A075B6Q5 118 aa8.27□□□□□ -1.09
SCN3B-205ENST00000528267 F8VRH5 84 aa8.27□□□□□ -1.09
SCN3B-205ENST00000528267 DPM2O94777 84 aa8.27□□□□□ -1.09
SCN3B-205ENST00000528267 CFAP161Q6P656 301 aa8.27□□□□□ -1.09
SCN3B-205ENST00000528267 MRPL35Q9NZE8 188 aaKnown RBP8.27□□□□□ -1.09
SCN3B-205ENST00000528267 PAM16Q9Y3D7 125 aa8.27□□□□□ -1.09
SCN3B-205ENST00000528267 ABCA13Q86UQ4 5058 aa8.27□□□□□ -1.09
SCN3B-205ENST00000528267 HSBP1L1C9JCN9 74 aa8.26□□□□□ -1.09
SCN3B-205ENST00000528267 IGKCP01834 107 aa8.26□□□□□ -1.09
SCN3B-205ENST00000528267 MALP21145 153 aa8.26□□□□□ -1.09
SCN3B-205ENST00000528267 SPAG11BQ08648 103 aa8.26□□□□□ -1.09
SCN3B-205ENST00000528267 KIAA0087Q14695 138 aa8.26□□□□□ -1.09
SCN3B-205ENST00000528267 SPATA45Q537H7 98 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms