RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 OR11H2Q8NH07 326 aa4.05□□□□□ -1.76
LINC01001-202ENST00000527683 ZNRF2Q8NHG8 242 aa4.05□□□□□ -1.76
LINC01001-202ENST00000527683 CHCHD7Q9BUK0 85 aa4.05□□□□□ -1.76
LINC01001-202ENST00000527683 GTSF1LQ9H1H1 148 aa4.05□□□□□ -1.76
LINC01001-202ENST00000527683 VCX2Q9H322 139 aa4.05□□□□□ -1.76
LINC01001-202ENST00000527683 CST9LQ9H4G1 147 aa4.05□□□□□ -1.76
LINC01001-202ENST00000527683 HIGD1BQ9P298 99 aa4.05□□□□□ -1.76
LINC01001-202ENST00000527683 DNAH10Q8IVF4 4471 aa4.05□□□□□ -1.76
LINC01001-202ENST00000527683 IGLV4-69A0A075B6H9 119 aa4.04□□□□□ -1.76
LINC01001-202ENST00000527683 C11orf86A6NJI1 115 aa4.04□□□□□ -1.76
LINC01001-202ENST00000527683 IGLL5B9A064 214 aa4.04□□□□□ -1.76
LINC01001-202ENST00000527683 E9PLD3 99 aa4.04□□□□□ -1.76
LINC01001-202ENST00000527683 H7C423 109 aa4.04□□□□□ -1.76
LINC01001-202ENST00000527683 DEFB4AO15263 64 aa4.04□□□□□ -1.76
LINC01001-202ENST00000527683 TIRAPP58753 221 aa4.04□□□□□ -1.76
LINC01001-202ENST00000527683 MRPS36P82909 103 aaKnown RBP4.04□□□□□ -1.76
LINC01001-202ENST00000527683 HSD52Q0P140 79 aa4.04□□□□□ -1.76
LINC01001-202ENST00000527683 LINC00336Q6ZUF6 198 aa4.04□□□□□ -1.76
LINC01001-202ENST00000527683 AMELXQ99217 191 aa4.04□□□□□ -1.76
LINC01001-202ENST00000527683 VPS25Q9BRG1 176 aa4.04□□□□□ -1.76
LINC01001-202ENST00000527683 UBE2D4Q9Y2X8 147 aa4.04□□□□□ -1.76
LINC01001-202ENST00000527683 CSDC2Q9Y534 153 aaKnown RBP4.04□□□□□ -1.76
LINC01001-202ENST00000527683 FRAS1Q86XX4 4008 aa4.04□□□□□ -1.76
LINC01001-202ENST00000527683 VPS13DQ5THJ4 4388 aa4.03□□□□□ -1.76
LINC01001-202ENST00000527683 TRBV25-1A0A075B6N4 114 aa4.03□□□□□ -1.76
LINC01001-202ENST00000527683 IGKV2D-26A0A0A0MRZ7 120 aa4.03□□□□□ -1.76
LINC01001-202ENST00000527683 GAGE12JA6NER3 117 aa4.03□□□□□ -1.76
LINC01001-202ENST00000527683 RTL8CO15255 209 aa4.03□□□□□ -1.76
LINC01001-202ENST00000527683 LINC00694P0DN24 101 aa4.03□□□□□ -1.76
LINC01001-202ENST00000527683 EMP1P54849 157 aa4.03□□□□□ -1.76
LINC01001-202ENST00000527683 SEC11AP67812 179 aa4.03□□□□□ -1.76
LINC01001-202ENST00000527683 GAGE4Q13068 117 aa4.03□□□□□ -1.76
LINC01001-202ENST00000527683 GAGE5Q13069 117 aa4.03□□□□□ -1.76
LINC01001-202ENST00000527683 BATFQ16520 125 aa4.03□□□□□ -1.76
LINC01001-202ENST00000527683 FAM222AQ5U5X8 452 aa4.03□□□□□ -1.76
LINC01001-202ENST00000527683 C2orf91Q6ZV80 131 aa4.03□□□□□ -1.76
LINC01001-202ENST00000527683 Q8NAQ8 132 aa4.03□□□□□ -1.76
LINC01001-202ENST00000527683 TMEM243Q9BU79 118 aa4.03□□□□□ -1.76
LINC01001-202ENST00000527683 CHAC1Q9BUX1 264 aa4.03□□□□□ -1.76
LINC01001-202ENST00000527683 C11orf68Q9H3H3 251 aaKnown RBP4.03□□□□□ -1.76
LINC01001-202ENST00000527683 PRO0255Q9UI72 69 aa4.03□□□□□ -1.76
LINC01001-202ENST00000527683 PCLOQ9Y6V0 5065 aa4.03□□□□□ -1.76
LINC01001-202ENST00000527683 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.02□□□□□ -1.77
LINC01001-202ENST00000527683 IGHV4-28A0A0C4DH34 117 aa4.02□□□□□ -1.77
LINC01001-202ENST00000527683 IGHV3-38A0A0C4DH36 116 aa4.02□□□□□ -1.77
LINC01001-202ENST00000527683 TINCRA0A1B0GVN0 87 aa4.02□□□□□ -1.77
LINC01001-202ENST00000527683 IGKV2-29A2NJV5 120 aaPredicted RBP4.02□□□□□ -1.77
LINC01001-202ENST00000527683 UBE2L6O14933 153 aa4.02□□□□□ -1.77
LINC01001-202ENST00000527683 SPART-AS1P0CW21 52 aa4.02□□□□□ -1.77
LINC01001-202ENST00000527683 DEFB130BP0DP73 79 aa4.02□□□□□ -1.77
LINC01001-202ENST00000527683 DEFB130AP0DP74 79 aa4.02□□□□□ -1.77
LINC01001-202ENST00000527683 HINT1P49773 126 aaPredicted RBP4.02□□□□□ -1.77
LINC01001-202ENST00000527683 DAD1P61803 113 aa4.02□□□□□ -1.77
LINC01001-202ENST00000527683 RBX1P62877 108 aa4.02□□□□□ -1.77
LINC01001-202ENST00000527683 TAL2Q16559 108 aa4.02□□□□□ -1.77
LINC01001-202ENST00000527683 MPV17L2Q567V2 206 aa4.02□□□□□ -1.77
LINC01001-202ENST00000527683 TMEM170BQ5T4T1 132 aa4.02□□□□□ -1.77
LINC01001-202ENST00000527683 DGAT2L7PQ6IED9 249 aa4.02□□□□□ -1.77
LINC01001-202ENST00000527683 PCP2Q8IVA1 136 aa4.02□□□□□ -1.77
LINC01001-202ENST00000527683 TMEM101Q96IK0 257 aa4.02□□□□□ -1.77
LINC01001-202ENST00000527683 Q9UF83 564 aa4.02□□□□□ -1.77
LINC01001-202ENST00000527683 TRAV26-1A0A087WT03 109 aa4.01□□□□□ -1.77
LINC01001-202ENST00000527683 TRAV8-6A0A0B4J262 113 aa4.01□□□□□ -1.77
LINC01001-202ENST00000527683 MYMXA0A1B0GTQ4 84 aa4.01□□□□□ -1.77
LINC01001-202ENST00000527683 A6NDN8 102 aa4.01□□□□□ -1.77
LINC01001-202ENST00000527683 K7EP13 123 aa4.01□□□□□ -1.77
LINC01001-202ENST00000527683 ATP5G1P05496 136 aa4.01□□□□□ -1.77
LINC01001-202ENST00000527683 ZNF22P17026 224 aaPredicted RBP4.01□□□□□ -1.77
LINC01001-202ENST00000527683 HERVK_113P63121 156 aa4.01□□□□□ -1.77
LINC01001-202ENST00000527683 BVES-AS1Q5T3Y7 98 aa4.01□□□□□ -1.77
LINC01001-202ENST00000527683 AMMECR1LQ6DCA0 310 aa4.01□□□□□ -1.77
LINC01001-202ENST00000527683 CFAP161Q6P656 301 aa4.01□□□□□ -1.77
LINC01001-202ENST00000527683 Q6ZUT4 128 aa4.01□□□□□ -1.77
LINC01001-202ENST00000527683 SH2D6Q7Z4S9 175 aa4.01□□□□□ -1.77
LINC01001-202ENST00000527683 FAM19A3Q7Z5A8 133 aa4.01□□□□□ -1.77
LINC01001-202ENST00000527683 OR5A1Q8NGJ0 315 aa4.01□□□□□ -1.77
LINC01001-202ENST00000527683 DEFB104AQ8WTQ1 72 aa4.01□□□□□ -1.77
LINC01001-202ENST00000527683 PLEKHB2Q96CS7 222 aa4.01□□□□□ -1.77
LINC01001-202ENST00000527683 TP73-AS1Q9UF72 201 aa4.01□□□□□ -1.77
LINC01001-202ENST00000527683 IGLV5-45A0A087WSX0 123 aa4□□□□□ -1.77
LINC01001-202ENST00000527683 TRBV6-8A0A0A6YYG3 113 aa4□□□□□ -1.77
LINC01001-202ENST00000527683 A0A0J9YXV3 536 aa4□□□□□ -1.77
LINC01001-202ENST00000527683 TMEM223A0PJW6 202 aa4□□□□□ -1.77
LINC01001-202ENST00000527683 ZNF815PA8K554 130 aa4□□□□□ -1.77
LINC01001-202ENST00000527683 TMEM238C9JI98 176 aa4□□□□□ -1.77
LINC01001-202ENST00000527683 H3BRM9 83 aa4□□□□□ -1.77
LINC01001-202ENST00000527683 M0R2N4 97 aa4□□□□□ -1.77
LINC01001-202ENST00000527683 LEPROTO15243 131 aa4□□□□□ -1.77
LINC01001-202ENST00000527683 LGALS3P17931 250 aaKnown RBP4□□□□□ -1.77
LINC01001-202ENST00000527683 UBE2D1P51668 147 aa4□□□□□ -1.77
LINC01001-202ENST00000527683 C12orf74Q32Q52 190 aa4□□□□□ -1.77
LINC01001-202ENST00000527683 NTM-AS1Q6ZSK4 140 aa4□□□□□ -1.77
LINC01001-202ENST00000527683 Q6ZTC4 211 aa4□□□□□ -1.77
LINC01001-202ENST00000527683 ATP6V0E2Q8NHE4 81 aa4□□□□□ -1.77
LINC01001-202ENST00000527683 ORAOV1Q8WV07 137 aa4□□□□□ -1.77
LINC01001-202ENST00000527683 FAM104AQ969W3 186 aa4□□□□□ -1.77
LINC01001-202ENST00000527683 OPRPNQ99935 248 aaPredicted RBP4□□□□□ -1.77
LINC01001-202ENST00000527683 GEMIN7Q9H840 131 aaKnown RBP4□□□□□ -1.77
LINC01001-202ENST00000527683 TRAV10A0A0B4J240 114 aa3.99□□□□□ -1.77
LINC01001-202ENST00000527683 LOC100131303A0A0U1RQF7 123 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms