RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 TMEM218A2RU14 115 aa10.15□□□□□ -0.78
CTSB-213ENST00000527215 IFITM10A6NMD0 228 aa10.15□□□□□ -0.78
CTSB-213ENST00000527215 APOMO95445 188 aa10.15□□□□□ -0.78
CTSB-213ENST00000527215 IFI27P40305 119 aaPredicted RBP10.15□□□□□ -0.78
CTSB-213ENST00000527215 Q6ZRU5 148 aa10.15□□□□□ -0.78
CTSB-213ENST00000527215 CAMK2N2Q96S95 79 aa10.14□□□□□ -0.79
CTSB-213ENST00000527215 IMMP2LQ96T52 175 aa10.14□□□□□ -0.79
CTSB-213ENST00000527215 SPAG11BQ08648 103 aa10.13□□□□□ -0.79
CTSB-213ENST00000527215 Q8N8P6 123 aa10.13□□□□□ -0.79
CTSB-213ENST00000527215 C7orf33Q8WU49 177 aa10.13□□□□□ -0.79
CTSB-213ENST00000527215 C2orf48Q96LS8 159 aa10.13□□□□□ -0.79
CTSB-213ENST00000527215 LINC00474Q9P2X8 69 aa10.13□□□□□ -0.79
CTSB-213ENST00000527215 PYGO1Q9Y3Y4 419 aa10.13□□□□□ -0.79
CTSB-213ENST00000527215 IGLV4-3A0A075B6K6 122 aa10.12□□□□□ -0.79
CTSB-213ENST00000527215 IGHV3OR16-9A0A0B4J2B5 98 aa10.12□□□□□ -0.79
CTSB-213ENST00000527215 CTDSP1Q9GZU7 261 aa10.12□□□□□ -0.79
CTSB-213ENST00000527215 LOC107984640A0A0U1RRK4 108 aa10.11□□□□□ -0.79
CTSB-213ENST00000527215 OR10D4PQ8NGN7 298 aa10.11□□□□□ -0.79
CTSB-213ENST00000527215 ORAOV1Q8WV07 137 aa10.11□□□□□ -0.79
CTSB-213ENST00000527215 PTTG1IPP53801 180 aa10.1□□□□□ -0.79
CTSB-213ENST00000527215 C2orf66Q6UXQ4 117 aa10.1□□□□□ -0.79
CTSB-213ENST00000527215 COMMD7Q86VX2 200 aa10.1□□□□□ -0.79
CTSB-213ENST00000527215 TMEM141Q96I45 108 aa10.1□□□□□ -0.79
CTSB-213ENST00000527215 SEC11CQ9BY50 192 aa10.1□□□□□ -0.79
CTSB-213ENST00000527215 TGIF2-C20orf24A0A0A6YYL0 155 aa10.09□□□□□ -0.79
CTSB-213ENST00000527215 GAGE2BQ13066 116 aa10.09□□□□□ -0.79
CTSB-213ENST00000527215 ORMDL2Q53FV1 153 aa10.09□□□□□ -0.79
CTSB-213ENST00000527215 CYSLTR1Q9Y271 337 aa10.09□□□□□ -0.79
CTSB-213ENST00000527215 TRAV9-1A0A075B6T8 112 aa10.08□□□□□ -0.8
CTSB-213ENST00000527215 KIAA1644Q3SXP7 199 aa10.08□□□□□ -0.8
CTSB-213ENST00000527215 LINC00242Q5T6M2 205 aa10.08□□□□□ -0.8
CTSB-213ENST00000527215 TEX43Q6ZNM6 134 aa10.08□□□□□ -0.8
CTSB-213ENST00000527215 NXT2Q9NPJ8 142 aaKnown RBP10.08□□□□□ -0.8
CTSB-213ENST00000527215 A0A0J9YXV3 536 aa10.07□□□□□ -0.8
CTSB-213ENST00000527215 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.07□□□□□ -0.8
CTSB-213ENST00000527215 K7EMI3 77 aa10.07□□□□□ -0.8
CTSB-213ENST00000527215 ZC2HC1BQ5TFG8 222 aa10.07□□□□□ -0.8
CTSB-213ENST00000527215 PLA2G2DQ9UNK4 145 aa10.07□□□□□ -0.8
CTSB-213ENST00000527215 UBE2D1P51668 147 aa10.06□□□□□ -0.8
CTSB-213ENST00000527215 PRR3P79522 188 aaKnown RBP10.06□□□□□ -0.8
CTSB-213ENST00000527215 RPL18AQ02543 176 aaKnown RBP10.06□□□□□ -0.8
CTSB-213ENST00000527215 RNF151Q2KHN1 245 aa10.06□□□□□ -0.8
CTSB-213ENST00000527215 LINC00173Q6ZV60 143 aa10.06□□□□□ -0.8
CTSB-213ENST00000527215 C2orf88Q9BSF0 95 aa10.06□□□□□ -0.8
CTSB-213ENST00000527215 A0A087WZ39 114 aa10.05□□□□□ -0.8
CTSB-213ENST00000527215 F8WDY8 70 aa10.05□□□□□ -0.8
CTSB-213ENST00000527215 NDUFA1O15239 70 aa10.05□□□□□ -0.8
CTSB-213ENST00000527215 S100PP25815 95 aa10.05□□□□□ -0.8
CTSB-213ENST00000527215 Q6ZN92 141 aa10.05□□□□□ -0.8
CTSB-213ENST00000527215 MRPL35Q9NZE8 188 aaKnown RBP10.05□□□□□ -0.8
CTSB-213ENST00000527215 IGIPA6NJ69 53 aa10.04□□□□□ -0.8
CTSB-213ENST00000527215 C10orf25Q5T742 122 aa10.04□□□□□ -0.8
CTSB-213ENST00000527215 AMELXQ99217 191 aa10.04□□□□□ -0.8
CTSB-213ENST00000527215 VCX2Q9H322 139 aa10.04□□□□□ -0.8
CTSB-213ENST00000527215 A0A1W2PNN7 141 aa10.03□□□□□ -0.8
CTSB-213ENST00000527215 NPSP0C0P6 89 aa10.03□□□□□ -0.8
CTSB-213ENST00000527215 C10orf91Q5T1B1 145 aa10.03□□□□□ -0.8
CTSB-213ENST00000527215 UNQ6190/PRO20217Q6UXQ8 127 aa10.03□□□□□ -0.8
CTSB-213ENST00000527215 GNB1LQ9BYB4 327 aa10.03□□□□□ -0.8
CTSB-213ENST00000527215 KIAA0087Q14695 138 aa10.02□□□□□ -0.81
CTSB-213ENST00000527215 C6orf48Q9UBA6 75 aa10.02□□□□□ -0.81
CTSB-213ENST00000527215 G0S2P27469 103 aa10.01□□□□□ -0.81
CTSB-213ENST00000527215 C9orf116Q5BN46 136 aaPredicted RBP10.01□□□□□ -0.81
CTSB-213ENST00000527215 TOMM6Q96B49 74 aa10.01□□□□□ -0.81
CTSB-213ENST00000527215 CARHSP1Q9Y2V2 147 aaKnown RBP10.01□□□□□ -0.81
CTSB-213ENST00000527215 RHEBQ15382 184 aa10□□□□□ -0.81
CTSB-213ENST00000527215 LINC01561Q8N1V8 128 aa10□□□□□ -0.81
CTSB-213ENST00000527215 TIMM17AQ99595 171 aa10□□□□□ -0.81
CTSB-213ENST00000527215 ALKBH7Q9BT30 221 aaPredicted RBP10□□□□□ -0.81
CTSB-213ENST00000527215 RPS10P5Q9NQ39 176 aa10□□□□□ -0.81
CTSB-213ENST00000527215 TLX1NBP0CAT3 122 aa9.99□□□□□ -0.81
CTSB-213ENST00000527215 MT1HL1P0DM35 61 aa9.99□□□□□ -0.81
CTSB-213ENST00000527215 COX19Q49B96 90 aa9.99□□□□□ -0.81
CTSB-213ENST00000527215 PAPPA-AS1Q5QFB9 102 aa9.99□□□□□ -0.81
CTSB-213ENST00000527215 C2orf82Q6UX34 121 aa9.99□□□□□ -0.81
CTSB-213ENST00000527215 Q6ZRP5 223 aa9.99□□□□□ -0.81
CTSB-213ENST00000527215 FAM19A3Q7Z5A8 133 aa9.99□□□□□ -0.81
CTSB-213ENST00000527215 HMCN2Q8NDA2 5059 aa9.99□□□□□ -0.81
CTSB-213ENST00000527215 MRPL18Q9H0U6 180 aaKnown RBP9.98□□□□□ -0.81
CTSB-213ENST00000527215 MT-ND6P03923 174 aa9.97□□□□□ -0.81
CTSB-213ENST00000527215 FABP9Q0Z7S8 132 aa9.97□□□□□ -0.81
CTSB-213ENST00000527215 PHF5AQ7RTV0 110 aaKnown RBP9.97□□□□□ -0.81
CTSB-213ENST00000527215 ERASQ7Z444 233 aa9.97□□□□□ -0.81
CTSB-213ENST00000527215 SCGB3A1Q96QR1 104 aa9.97□□□□□ -0.81
CTSB-213ENST00000527215 TRBV30A0A0K0K1B3 111 aa9.96□□□□□ -0.82
CTSB-213ENST00000527215 LINC01546A6NGU7 62 aa9.96□□□□□ -0.82
CTSB-213ENST00000527215 HERVK_113P63121 156 aa9.96□□□□□ -0.82
CTSB-213ENST00000527215 SEC11AP67812 179 aa9.96□□□□□ -0.82
CTSB-213ENST00000527215 GAGE2EQ4V326 116 aa9.96□□□□□ -0.82
CTSB-213ENST00000527215 TOMM7Q9P0U1 55 aa9.96□□□□□ -0.82
CTSB-213ENST00000527215 GAGE2DQ9UEU5 116 aa9.96□□□□□ -0.82
CTSB-213ENST00000527215 FAM168BA1KXE4 195 aa9.95□□□□□ -0.82
CTSB-213ENST00000527215 PRSS2P07478 247 aa9.95□□□□□ -0.82
CTSB-213ENST00000527215 SPINK6Q6UWN8 80 aa9.95□□□□□ -0.82
CTSB-213ENST00000527215 PACRGQ96M98 296 aaPredicted RBP9.95□□□□□ -0.82
CTSB-213ENST00000527215 GEMIN7Q9H840 131 aaKnown RBP9.95□□□□□ -0.82
CTSB-213ENST00000527215 CDKN2A-AS1Q9UH64 79 aa9.95□□□□□ -0.82
CTSB-213ENST00000527215 PSORS1C2Q9UIG4 136 aa9.94□□□□□ -0.82
CTSB-213ENST00000527215 UBR4Q5T4S7 5183 aa9.93□□□□□ -0.82
CTSB-213ENST00000527215 SRSF9Q13242 221 aaKnown RBP eCLIP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 1754.1 ms