RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 SS18Q15532 418 aa7.03□□□□□ -1.28
NEDD8-205ENST00000527046 VCX2Q9H322 139 aa7.03□□□□□ -1.28
NEDD8-205ENST00000527046 CST9LQ9H4G1 147 aa7.03□□□□□ -1.28
NEDD8-205ENST00000527046 LINC01549A6NIU2 74 aa7.02□□□□□ -1.29
NEDD8-205ENST00000527046 IFITM10A6NMD0 228 aa7.02□□□□□ -1.29
NEDD8-205ENST00000527046 TEX43Q6ZNM6 134 aa7.02□□□□□ -1.29
NEDD8-205ENST00000527046 SPATA12Q7Z6I5 190 aa7.02□□□□□ -1.29
NEDD8-205ENST00000527046 DYNC1H1Q14204 4646 aaKnown RBP7.02□□□□□ -1.29
NEDD8-205ENST00000527046 A0A0J9YXV3 536 aa7.01□□□□□ -1.29
NEDD8-205ENST00000527046 C5orf38Q86SI9 138 aa7.01□□□□□ -1.29
NEDD8-205ENST00000527046 IGLV4-69A0A075B6H9 119 aa7□□□□□ -1.29
NEDD8-205ENST00000527046 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7□□□□□ -1.29
NEDD8-205ENST00000527046 HSBP1O75506 76 aa7□□□□□ -1.29
NEDD8-205ENST00000527046 PMVKQ15126 192 aa7□□□□□ -1.29
NEDD8-205ENST00000527046 GVQW2A0A096LPI5 108 aaPredicted RBP6.99□□□□□ -1.29
NEDD8-205ENST00000527046 NDUFA6P56556 154 aa6.99□□□□□ -1.29
NEDD8-205ENST00000527046 IFI27L1Q96BM0 104 aa6.99□□□□□ -1.29
NEDD8-205ENST00000527046 LINC00526Q96FQ7 95 aa6.99□□□□□ -1.29
NEDD8-205ENST00000527046 DNAH5Q8TE73 4624 aa6.98□□□□□ -1.29
NEDD8-205ENST00000527046 IGLV5-45A0A087WSX0 123 aa6.98□□□□□ -1.29
NEDD8-205ENST00000527046 A0A087WZ39 114 aa6.98□□□□□ -1.29
NEDD8-205ENST00000527046 J3QL48 77 aa6.98□□□□□ -1.29
NEDD8-205ENST00000527046 ATP5LO75964 103 aa6.98□□□□□ -1.29
NEDD8-205ENST00000527046 KRTAP10-1P60331 282 aa6.98□□□□□ -1.29
NEDD8-205ENST00000527046 KIAA0087Q14695 138 aa6.98□□□□□ -1.29
NEDD8-205ENST00000527046 PAPPA-AS1Q5QFB9 102 aa6.98□□□□□ -1.29
NEDD8-205ENST00000527046 Q6ZN92 141 aa6.98□□□□□ -1.29
NEDD8-205ENST00000527046 CDKN2A-AS1Q9UH64 79 aa6.98□□□□□ -1.29
NEDD8-205ENST00000527046 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.97□□□□□ -1.29
NEDD8-205ENST00000527046 IGHV3-64A0A075B6Q5 118 aa6.97□□□□□ -1.29
NEDD8-205ENST00000527046 TINCRA0A1B0GVN0 87 aa6.97□□□□□ -1.29
NEDD8-205ENST00000527046 A6NJY4 79 aa6.97□□□□□ -1.29
NEDD8-205ENST00000527046 COX7A2LO14548 114 aa6.97□□□□□ -1.29
NEDD8-205ENST00000527046 IGLC3P0DOY3 106 aa6.97□□□□□ -1.29
NEDD8-205ENST00000527046 LINC01620Q4KN68 170 aa6.97□□□□□ -1.29
NEDD8-205ENST00000527046 HIGD2BQ4VC39 106 aa6.97□□□□□ -1.29
NEDD8-205ENST00000527046 C2orf88Q9BSF0 95 aa6.97□□□□□ -1.29
NEDD8-205ENST00000527046 TRAV12-1A0A0B4J245 112 aa6.96□□□□□ -1.3
NEDD8-205ENST00000527046 IGHV1-58A0A0C4DH39 117 aa6.96□□□□□ -1.3
NEDD8-205ENST00000527046 LEPROTL1O95214 131 aa6.96□□□□□ -1.3
NEDD8-205ENST00000527046 FABP4P15090 132 aa6.96□□□□□ -1.3
NEDD8-205ENST00000527046 LINC01561Q8N1V8 128 aa6.96□□□□□ -1.3
NEDD8-205ENST00000527046 C11orf86A6NJI1 115 aa6.95□□□□□ -1.3
NEDD8-205ENST00000527046 EREGO14944 169 aa6.95□□□□□ -1.3
NEDD8-205ENST00000527046 CNBPP62633 177 aaKnown RBP6.95□□□□□ -1.3
NEDD8-205ENST00000527046 ODF1Q14990 250 aa6.95□□□□□ -1.3
NEDD8-205ENST00000527046 CDPF1Q6NVV7 123 aa6.95□□□□□ -1.3
NEDD8-205ENST00000527046 CFAP161Q6P656 301 aa6.95□□□□□ -1.3
NEDD8-205ENST00000527046 C9orf163Q8N9P6 203 aa6.95□□□□□ -1.3
NEDD8-205ENST00000527046 FAM30AQ9NZY2 134 aa6.95□□□□□ -1.3
NEDD8-205ENST00000527046 IGLV5-52A0A0A0MRZ9 124 aa6.94□□□□□ -1.3
NEDD8-205ENST00000527046 hDV102S1A0JD36 115 aa6.94□□□□□ -1.3
NEDD8-205ENST00000527046 ZNF22P17026 224 aaPredicted RBP6.94□□□□□ -1.3
NEDD8-205ENST00000527046 HERVK_113P63121 156 aa6.94□□□□□ -1.3
NEDD8-205ENST00000527046 C14orf177Q52M58 125 aa6.94□□□□□ -1.3
NEDD8-205ENST00000527046 SDIM1Q6ZPB5 146 aa6.94□□□□□ -1.3
NEDD8-205ENST00000527046 LRP1BQ9NZR2 4599 aa6.94□□□□□ -1.3
NEDD8-205ENST00000527046 SMIM1B2RUZ4 78 aa6.93□□□□□ -1.3
NEDD8-205ENST00000527046 GCSHP23434 173 aa6.93□□□□□ -1.3
NEDD8-205ENST00000527046 SEC11AP67812 179 aa6.93□□□□□ -1.3
NEDD8-205ENST00000527046 C10orf25Q5T742 122 aa6.93□□□□□ -1.3
NEDD8-205ENST00000527046 HIST3H2BBQ8N257 126 aa6.93□□□□□ -1.3
NEDD8-205ENST00000527046 PACRGQ96M98 296 aaPredicted RBP6.93□□□□□ -1.3
NEDD8-205ENST00000527046 MRPL35Q9NZE8 188 aaKnown RBP6.93□□□□□ -1.3
NEDD8-205ENST00000527046 CHTOPQ9Y3Y2 248 aaKnown RBP6.93□□□□□ -1.3
NEDD8-205ENST00000527046 HECTD4Q9Y4D8 3996 aa6.92□□□□□ -1.3
NEDD8-205ENST00000527046 C16orf90A8MZG2 172 aa6.92□□□□□ -1.3
NEDD8-205ENST00000527046 PANO1I0J062 215 aa6.92□□□□□ -1.3
NEDD8-205ENST00000527046 XGP55808 180 aa6.92□□□□□ -1.3
NEDD8-205ENST00000527046 OR10D4PQ8NGN7 298 aa6.92□□□□□ -1.3
NEDD8-205ENST00000527046 ORAOV1Q8WV07 137 aa6.92□□□□□ -1.3
NEDD8-205ENST00000527046 C2orf48Q96LS8 159 aa6.92□□□□□ -1.3
NEDD8-205ENST00000527046 CHAC1Q9BUX1 264 aa6.92□□□□□ -1.3
NEDD8-205ENST00000527046 PKHD1P08F94 4074 aa6.92□□□□□ -1.3
NEDD8-205ENST00000527046 IGLV5-39A0A0G2JS06 123 aa6.91□□□□□ -1.3
NEDD8-205ENST00000527046 C5orf52A6NGY3 159 aa6.91□□□□□ -1.3
NEDD8-205ENST00000527046 F8VRH5 84 aa6.91□□□□□ -1.3
NEDD8-205ENST00000527046 SPINK8P0C7L1 97 aa6.91□□□□□ -1.3
NEDD8-205ENST00000527046 MALP21145 153 aa6.91□□□□□ -1.3
NEDD8-205ENST00000527046 C2orf82Q6UX34 121 aa6.91□□□□□ -1.3
NEDD8-205ENST00000527046 Q6ZRU5 148 aa6.91□□□□□ -1.3
NEDD8-205ENST00000527046 Q6ZSA8 131 aa6.91□□□□□ -1.3
NEDD8-205ENST00000527046 GEMIN7Q9H840 131 aaKnown RBP6.91□□□□□ -1.3
NEDD8-205ENST00000527046 HSPB8Q9UJY1 196 aa6.91□□□□□ -1.3
NEDD8-205ENST00000527046 SYS1-DBNDD2H3BUS1 97 aa6.9□□□□□ -1.3
NEDD8-205ENST00000527046 APOMO95445 188 aa6.9□□□□□ -1.3
NEDD8-205ENST00000527046 C3orf79P0CE67 100 aa6.9□□□□□ -1.3
NEDD8-205ENST00000527046 SNRPEP62304 92 aaKnown RBP6.9□□□□□ -1.3
NEDD8-205ENST00000527046 SPAG11BQ08648 103 aa6.9□□□□□ -1.3
NEDD8-205ENST00000527046 UNQ6190/PRO20217Q6UXQ8 127 aa6.9□□□□□ -1.3
NEDD8-205ENST00000527046 LINC00469Q8N7U9 141 aa6.9□□□□□ -1.3
NEDD8-205ENST00000527046 PMCHL2Q9BQD1 86 aa6.9□□□□□ -1.3
NEDD8-205ENST00000527046 KIAA1109Q2LD37 5005 aa6.89□□□□□ -1.31
NEDD8-205ENST00000527046 DNAH8Q96JB1 4490 aa6.89□□□□□ -1.31
NEDD8-205ENST00000527046 TMEM223A0PJW6 202 aa6.89□□□□□ -1.31
NEDD8-205ENST00000527046 ZNF561-AS1K7EIQ3 104 aa6.89□□□□□ -1.31
NEDD8-205ENST00000527046 SYCNQ0VAF6 134 aa6.89□□□□□ -1.31
NEDD8-205ENST00000527046 LINC01545Q5VT33 79 aa6.89□□□□□ -1.31
NEDD8-205ENST00000527046 Q8IZM0 81 aa6.89□□□□□ -1.31
NEDD8-205ENST00000527046 HIST1H2BLQ99880 126 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms