RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 IMMP2LQ96T52 175 aa7.79□□□□□ -1.16
SSRP1-203ENST00000526696 OPRPNQ99935 248 aaPredicted RBP7.79□□□□□ -1.16
SSRP1-203ENST00000526696 TWIST1Q15672 202 aa7.78□□□□□ -1.16
SSRP1-203ENST00000526696 OR5A1Q8NGJ0 315 aa7.78□□□□□ -1.16
SSRP1-203ENST00000526696 TYMSOSQ8TAI1 123 aa7.78□□□□□ -1.16
SSRP1-203ENST00000526696 YPEL4Q96NS1 127 aa7.78□□□□□ -1.16
SSRP1-203ENST00000526696 SSPOA2VEC9 5147 aa7.78□□□□□ -1.16
SSRP1-203ENST00000526696 LINC00959A0A1B0GUT2 108 aa7.77□□□□□ -1.17
SSRP1-203ENST00000526696 APCSP02743 223 aa7.77□□□□□ -1.17
SSRP1-203ENST00000526696 SMIM15Q7Z3B0 74 aa7.77□□□□□ -1.17
SSRP1-203ENST00000526696 GATD1Q8NB37 220 aa7.77□□□□□ -1.17
SSRP1-203ENST00000526696 NUDT10Q8NFP7 164 aa7.77□□□□□ -1.17
SSRP1-203ENST00000526696 NUDT11Q96G61 164 aa7.77□□□□□ -1.17
SSRP1-203ENST00000526696 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.76□□□□□ -1.17
SSRP1-203ENST00000526696 IGKV2-29A2NJV5 120 aaPredicted RBP7.76□□□□□ -1.17
SSRP1-203ENST00000526696 KRTAP10-6P60371 365 aaPredicted RBP7.76□□□□□ -1.17
SSRP1-203ENST00000526696 RNASEKQ6P5S7 137 aaKnown RBP7.76□□□□□ -1.17
SSRP1-203ENST00000526696 LINC00173Q6ZV60 143 aa7.76□□□□□ -1.17
SSRP1-203ENST00000526696 CBLN2Q8IUK8 224 aa7.76□□□□□ -1.17
SSRP1-203ENST00000526696 PPDPFQ9H3Y8 114 aa7.76□□□□□ -1.17
SSRP1-203ENST00000526696 V9GYV3 84 aa7.76□□□□□ -1.17
SSRP1-203ENST00000526696 SDHAF1A6NFY7 115 aa7.75□□□□□ -1.17
SSRP1-203ENST00000526696 COLCA2A8K830 154 aa7.75□□□□□ -1.17
SSRP1-203ENST00000526696 CT83Q5H943 113 aa7.75□□□□□ -1.17
SSRP1-203ENST00000526696 FAM19A5Q7Z5A7 132 aaPredicted RBP7.75□□□□□ -1.17
SSRP1-203ENST00000526696 BTF3L4Q96K17 158 aa7.75□□□□□ -1.17
SSRP1-203ENST00000526696 CAMK2N2Q96S95 79 aa7.75□□□□□ -1.17
SSRP1-203ENST00000526696 TRBV24-1A0A075B6N3 115 aa7.74□□□□□ -1.17
SSRP1-203ENST00000526696 TRAV9-1A0A075B6T8 112 aa7.74□□□□□ -1.17
SSRP1-203ENST00000526696 TRBV6-5A0A0K0K1A5 114 aa7.74□□□□□ -1.17
SSRP1-203ENST00000526696 ZNF861PO60384 105 aa7.74□□□□□ -1.17
SSRP1-203ENST00000526696 KRTAP13-2Q52LG2 175 aa7.74□□□□□ -1.17
SSRP1-203ENST00000526696 TSKUQ8WUA8 353 aa7.74□□□□□ -1.17
SSRP1-203ENST00000526696 I3L3M4 83 aa7.73□□□□□ -1.17
SSRP1-203ENST00000526696 GATCO43716 136 aaKnown RBP7.73□□□□□ -1.17
SSRP1-203ENST00000526696 CFC1BP0CG36 223 aa7.73□□□□□ -1.17
SSRP1-203ENST00000526696 CD164L2Q6UWJ8 174 aa7.73□□□□□ -1.17
SSRP1-203ENST00000526696 RPL39LQ96EH5 51 aaKnown RBP7.73□□□□□ -1.17
SSRP1-203ENST00000526696 TMEM101Q96IK0 257 aa7.73□□□□□ -1.17
SSRP1-203ENST00000526696 RNASE7Q9H1E1 156 aaKnown RBP7.73□□□□□ -1.17
SSRP1-203ENST00000526696 ANAPC11Q9NYG5 84 aa7.73□□□□□ -1.17
SSRP1-203ENST00000526696 SMIM27A0A1W2PRY6 76 aa7.72□□□□□ -1.17
SSRP1-203ENST00000526696 S100PP25815 95 aa7.72□□□□□ -1.17
SSRP1-203ENST00000526696 RNF151Q2KHN1 245 aa7.72□□□□□ -1.17
SSRP1-203ENST00000526696 MRPL52Q86TS9 123 aaKnown RBP7.72□□□□□ -1.17
SSRP1-203ENST00000526696 A8MWL6 223 aa7.71□□□□□ -1.18
SSRP1-203ENST00000526696 ESDP10768 282 aa7.71□□□□□ -1.18
SSRP1-203ENST00000526696 PMCHP20382 165 aa7.71□□□□□ -1.18
SSRP1-203ENST00000526696 FOXA3P55318 350 aaPredicted RBP7.71□□□□□ -1.18
SSRP1-203ENST00000526696 UBE2BP63146 152 aa7.71□□□□□ -1.18
SSRP1-203ENST00000526696 SS18Q15532 418 aa7.71□□□□□ -1.18
SSRP1-203ENST00000526696 MRAP2Q96G30 205 aa7.71□□□□□ -1.18
SSRP1-203ENST00000526696 C2orf48Q96LS8 159 aa7.71□□□□□ -1.18
SSRP1-203ENST00000526696 USH2AO75445 5202 aa7.7□□□□□ -1.18
SSRP1-203ENST00000526696 TSHBP01222 138 aa7.7□□□□□ -1.18
SSRP1-203ENST00000526696 LINC00304Q8N9R0 145 aa7.7□□□□□ -1.18
SSRP1-203ENST00000526696 M0QXV9 152 aa7.69□□□□□ -1.18
SSRP1-203ENST00000526696 RAB5AP20339 215 aa7.69□□□□□ -1.18
SSRP1-203ENST00000526696 BORCS7Q96B45 105 aa7.69□□□□□ -1.18
SSRP1-203ENST00000526696 ST20Q9HBF5 79 aa7.69□□□□□ -1.18
SSRP1-203ENST00000526696 CDC42SE2Q9NRR3 84 aa7.69□□□□□ -1.18
SSRP1-203ENST00000526696 FCGBPQ9Y6R7 5405 aaPredicted RBP7.68□□□□□ -1.18
SSRP1-203ENST00000526696 TGIF2-C20orf24A0A0A6YYL0 155 aa7.68□□□□□ -1.18
SSRP1-203ENST00000526696 TRBV27A0A0K0K1C4 114 aa7.68□□□□□ -1.18
SSRP1-203ENST00000526696 SMAGPQ0VAQ4 97 aa7.68□□□□□ -1.18
SSRP1-203ENST00000526696 KRTAP13-3Q3SY46 172 aa7.68□□□□□ -1.18
SSRP1-203ENST00000526696 NAT8BQ9UHF3 227 aa7.68□□□□□ -1.18
SSRP1-203ENST00000526696 CSDC2Q9Y534 153 aaKnown RBP7.68□□□□□ -1.18
SSRP1-203ENST00000526696 SYNE2Q8WXH0 6885 aaKnown RBP7.68□□□□□ -1.18
SSRP1-203ENST00000526696 C1orf196B1AJZ1 125 aa7.67□□□□□ -1.18
SSRP1-203ENST00000526696 POLR2KP53803 58 aaKnown RBP7.67□□□□□ -1.18
SSRP1-203ENST00000526696 COX19Q49B96 90 aa7.67□□□□□ -1.18
SSRP1-203ENST00000526696 TMEM191AQ9H0A3 160 aa7.67□□□□□ -1.18
SSRP1-203ENST00000526696 MALP21145 153 aa7.66□□□□□ -1.18
SSRP1-203ENST00000526696 ATP5L2Q7Z4Y8 100 aa7.66□□□□□ -1.18
SSRP1-203ENST00000526696 FLGP20930 4061 aaPredicted RBP7.66□□□□□ -1.18
SSRP1-203ENST00000526696 A0A1B0GUT8 65 aa7.65□□□□□ -1.18
SSRP1-203ENST00000526696 HIGD1CA8MV81 97 aa7.65□□□□□ -1.18
SSRP1-203ENST00000526696 COX7A2LO14548 114 aa7.65□□□□□ -1.18
SSRP1-203ENST00000526696 PPP1R17O96001 155 aa7.65□□□□□ -1.18
SSRP1-203ENST00000526696 C10orf25Q5T742 122 aa7.65□□□□□ -1.18
SSRP1-203ENST00000526696 TLX1NBP0CAT3 122 aa7.64□□□□□ -1.19
SSRP1-203ENST00000526696 SEC61BP60468 96 aaKnown RBP7.64□□□□□ -1.19
SSRP1-203ENST00000526696 GAGE2EQ4V326 116 aa7.64□□□□□ -1.19
SSRP1-203ENST00000526696 LINC00242Q5T6M2 205 aa7.64□□□□□ -1.19
SSRP1-203ENST00000526696 LINC00337Q8N6G1 96 aa7.64□□□□□ -1.19
SSRP1-203ENST00000526696 GNB1LQ9BYB4 327 aa7.64□□□□□ -1.19
SSRP1-203ENST00000526696 MRPL35Q9NZE8 188 aaKnown RBP7.64□□□□□ -1.19
SSRP1-203ENST00000526696 GAGE2DQ9UEU5 116 aa7.64□□□□□ -1.19
SSRP1-203ENST00000526696 A0A1B0GW15 77 aa7.63□□□□□ -1.19
SSRP1-203ENST00000526696 A0A1B0GXF2 115 aa7.63□□□□□ -1.19
SSRP1-203ENST00000526696 VCYO14598 125 aa7.63□□□□□ -1.19
SSRP1-203ENST00000526696 RAB4AP20338 218 aa7.63□□□□□ -1.19
SSRP1-203ENST00000526696 SPAG11BQ08648 103 aa7.63□□□□□ -1.19
SSRP1-203ENST00000526696 C5orf38Q86SI9 138 aa7.63□□□□□ -1.19
SSRP1-203ENST00000526696 F8WDY8 70 aa7.62□□□□□ -1.19
SSRP1-203ENST00000526696 FCER1GP30273 86 aa7.62□□□□□ -1.19
SSRP1-203ENST00000526696 KIR2DL4Q99706 377 aa7.62□□□□□ -1.19
SSRP1-203ENST00000526696 TIMM21Q9BVV7 248 aa7.62□□□□□ -1.19
SSRP1-203ENST00000526696 S100A8P05109 93 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms