RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 IFITM10A6NMD0 228 aa7.46□□□□□ -1.22
SSBP3-210ENST00000525990 S100A8P05109 93 aa7.46□□□□□ -1.22
SSBP3-210ENST00000525990 C10orf25Q5T742 122 aa7.46□□□□□ -1.22
SSBP3-210ENST00000525990 ZC2HC1BQ5TFG8 222 aa7.46□□□□□ -1.22
SSBP3-210ENST00000525990 TMEM136Q6ZRR5 245 aa7.46□□□□□ -1.22
SSBP3-210ENST00000525990 ORMDL3Q8N138 153 aa7.46□□□□□ -1.22
SSBP3-210ENST00000525990 C2orf48Q96LS8 159 aa7.46□□□□□ -1.22
SSBP3-210ENST00000525990 SPANXA1Q9NS26 97 aa7.46□□□□□ -1.22
SSBP3-210ENST00000525990 PPBPP02775 128 aa7.45□□□□□ -1.22
SSBP3-210ENST00000525990 MRPS36P82909 103 aaKnown RBP7.45□□□□□ -1.22
SSBP3-210ENST00000525990 C9orf116Q5BN46 136 aaPredicted RBP7.45□□□□□ -1.22
SSBP3-210ENST00000525990 ATP5L2Q7Z4Y8 100 aa7.45□□□□□ -1.22
SSBP3-210ENST00000525990 IGLV4-3A0A075B6K6 122 aa7.44□□□□□ -1.22
SSBP3-210ENST00000525990 PHF5AQ7RTV0 110 aaKnown RBP7.44□□□□□ -1.22
SSBP3-210ENST00000525990 OR10D4PQ8NGN7 298 aa7.44□□□□□ -1.22
SSBP3-210ENST00000525990 LINC01600Q96MT4 127 aa7.44□□□□□ -1.22
SSBP3-210ENST00000525990 PKIGQ9Y2B9 76 aa7.44□□□□□ -1.22
SSBP3-210ENST00000525990 UBR4Q5T4S7 5183 aa7.43□□□□□ -1.22
SSBP3-210ENST00000525990 TNXBP22105 4242 aa7.43□□□□□ -1.22
SSBP3-210ENST00000525990 FAM168BA1KXE4 195 aa7.43□□□□□ -1.22
SSBP3-210ENST00000525990 SRSF9Q13242 221 aaKnown RBP eCLIP7.43□□□□□ -1.22
SSBP3-210ENST00000525990 UNQ6190/PRO20217Q6UXQ8 127 aa7.43□□□□□ -1.22
SSBP3-210ENST00000525990 Q6ZRP5 223 aa7.43□□□□□ -1.22
SSBP3-210ENST00000525990 RAB5AP20339 215 aa7.42□□□□□ -1.22
SSBP3-210ENST00000525990 IFI27P40305 119 aaPredicted RBP7.42□□□□□ -1.22
SSBP3-210ENST00000525990 LINC00242Q5T6M2 205 aa7.42□□□□□ -1.22
SSBP3-210ENST00000525990 LINC00173Q6ZV60 143 aa7.42□□□□□ -1.22
SSBP3-210ENST00000525990 KRTAP11-1Q8IUC1 163 aa7.42□□□□□ -1.22
SSBP3-210ENST00000525990 C6orf48Q9UBA6 75 aa7.42□□□□□ -1.22
SSBP3-210ENST00000525990 PSORS1C2Q9UIG4 136 aa7.42□□□□□ -1.22
SSBP3-210ENST00000525990 ADCYAP1P18509 176 aa7.41□□□□□ -1.22
SSBP3-210ENST00000525990 PNRC1Q12796 327 aaPredicted RBP7.41□□□□□ -1.22
SSBP3-210ENST00000525990 KIAA0087Q14695 138 aa7.41□□□□□ -1.22
SSBP3-210ENST00000525990 SPINK6Q6UWN8 80 aa7.41□□□□□ -1.22
SSBP3-210ENST00000525990 MAP1LC3AQ9H492 121 aa7.41□□□□□ -1.22
SSBP3-210ENST00000525990 MRPL35Q9NZE8 188 aaKnown RBP7.41□□□□□ -1.22
SSBP3-210ENST00000525990 PRSS47A8MTI9 375 aa7.4□□□□□ -1.22
SSBP3-210ENST00000525990 NDUFA1O15239 70 aa7.4□□□□□ -1.22
SSBP3-210ENST00000525990 RNF151Q2KHN1 245 aa7.4□□□□□ -1.22
SSBP3-210ENST00000525990 C2orf82Q6UX34 121 aa7.4□□□□□ -1.22
SSBP3-210ENST00000525990 KRTAP7-1Q8IUC3 87 aa7.4□□□□□ -1.22
SSBP3-210ENST00000525990 ANAPC16Q96DE5 110 aa7.4□□□□□ -1.22
SSBP3-210ENST00000525990 TMEM141Q96I45 108 aa7.4□□□□□ -1.22
SSBP3-210ENST00000525990 PYGO1Q9Y3Y4 419 aa7.4□□□□□ -1.22
SSBP3-210ENST00000525990 A0A087WZ39 114 aa7.39□□□□□ -1.23
SSBP3-210ENST00000525990 TGIF2-C20orf24A0A0A6YYL0 155 aa7.39□□□□□ -1.23
SSBP3-210ENST00000525990 MT-ND4LP03901 98 aa7.39□□□□□ -1.23
SSBP3-210ENST00000525990 UBE2D1P51668 147 aa7.39□□□□□ -1.23
SSBP3-210ENST00000525990 KRTAP10-8P60410 259 aa7.39□□□□□ -1.23
SSBP3-210ENST00000525990 GAGE2EQ4V326 116 aa7.39□□□□□ -1.23
SSBP3-210ENST00000525990 C2orf66Q6UXQ4 117 aa7.39□□□□□ -1.23
SSBP3-210ENST00000525990 FAM19A5Q7Z5A7 132 aaPredicted RBP7.39□□□□□ -1.23
SSBP3-210ENST00000525990 Q8N8P6 123 aa7.39□□□□□ -1.23
SSBP3-210ENST00000525990 GAGE2DQ9UEU5 116 aa7.39□□□□□ -1.23
SSBP3-210ENST00000525990 MT-ND6P03923 174 aa7.38□□□□□ -1.23
SSBP3-210ENST00000525990 RAB14P61106 215 aa7.38□□□□□ -1.23
SSBP3-210ENST00000525990 KIAA1644Q3SXP7 199 aa7.38□□□□□ -1.23
SSBP3-210ENST00000525990 TEX43Q6ZNM6 134 aa7.38□□□□□ -1.23
SSBP3-210ENST00000525990 CYSLTR1Q9Y271 337 aa7.38□□□□□ -1.23
SSBP3-210ENST00000525990 LAMTOR2Q9Y2Q5 125 aa7.38□□□□□ -1.23
SSBP3-210ENST00000525990 C1orf137Q5JT78 98 aa7.37□□□□□ -1.23
SSBP3-210ENST00000525990 CLLU1Q5K131 121 aa7.37□□□□□ -1.23
SSBP3-210ENST00000525990 REG3GQ6UW15 175 aa7.37□□□□□ -1.23
SSBP3-210ENST00000525990 IMMP2LQ96T52 175 aa7.37□□□□□ -1.23
SSBP3-210ENST00000525990 AMELXQ99217 191 aa7.37□□□□□ -1.23
SSBP3-210ENST00000525990 IGIPA6NJ69 53 aa7.36□□□□□ -1.23
SSBP3-210ENST00000525990 TLX1NBP0CAT3 122 aa7.36□□□□□ -1.23
SSBP3-210ENST00000525990 IFITM2Q01629 132 aa7.36□□□□□ -1.23
SSBP3-210ENST00000525990 F8WDY8 70 aa7.35□□□□□ -1.23
SSBP3-210ENST00000525990 C9orf129Q5T035 196 aaKnown RBP7.35□□□□□ -1.23
SSBP3-210ENST00000525990 CTDSP1Q9GZU7 261 aa7.35□□□□□ -1.23
SSBP3-210ENST00000525990 ORMDL2Q53FV1 153 aa7.34□□□□□ -1.23
SSBP3-210ENST00000525990 C2orf88Q9BSF0 95 aa7.34□□□□□ -1.23
SSBP3-210ENST00000525990 VCX2Q9H322 139 aa7.34□□□□□ -1.23
SSBP3-210ENST00000525990 TOMM7Q9P0U1 55 aa7.34□□□□□ -1.23
SSBP3-210ENST00000525990 M0QXV9 152 aa7.33□□□□□ -1.24
SSBP3-210ENST00000525990 IGLV7-43P04211 117 aa7.33□□□□□ -1.24
SSBP3-210ENST00000525990 Q6ZN92 141 aa7.33□□□□□ -1.24
SSBP3-210ENST00000525990 NXT2Q9NPJ8 142 aaKnown RBP7.33□□□□□ -1.24
SSBP3-210ENST00000525990 CDKN2A-AS1Q9UH64 79 aa7.33□□□□□ -1.24
SSBP3-210ENST00000525990 TRBV30A0A0K0K1B3 111 aa7.32□□□□□ -1.24
SSBP3-210ENST00000525990 TMEM218A2RU14 115 aa7.32□□□□□ -1.24
SSBP3-210ENST00000525990 NDUFC2-KCTD14E9PQ53 114 aa7.32□□□□□ -1.24
SSBP3-210ENST00000525990 FAM19A3Q7Z5A8 133 aa7.32□□□□□ -1.24
SSBP3-210ENST00000525990 LINC00469Q8N7U9 141 aa7.32□□□□□ -1.24
SSBP3-210ENST00000525990 LINC01561Q8N1V8 128 aa7.31□□□□□ -1.24
SSBP3-210ENST00000525990 TOMM6Q96B49 74 aa7.31□□□□□ -1.24
SSBP3-210ENST00000525990 PACRGQ96M98 296 aaPredicted RBP7.31□□□□□ -1.24
SSBP3-210ENST00000525990 K7EMI3 77 aa7.3□□□□□ -1.24
SSBP3-210ENST00000525990 PRR26Q8N8Z3 221 aa7.3□□□□□ -1.24
SSBP3-210ENST00000525990 XAGE1AQ9HD64 81 aa7.3□□□□□ -1.24
SSBP3-210ENST00000525990 PRSS2P07478 247 aa7.29□□□□□ -1.24
SSBP3-210ENST00000525990 NPSP0C0P6 89 aa7.29□□□□□ -1.24
SSBP3-210ENST00000525990 UBE2BP63146 152 aa7.29□□□□□ -1.24
SSBP3-210ENST00000525990 UQCC3Q6UW78 93 aa7.29□□□□□ -1.24
SSBP3-210ENST00000525990 Q8IZM0 81 aa7.29□□□□□ -1.24
SSBP3-210ENST00000525990 TIMM17AQ99595 171 aa7.29□□□□□ -1.24
SSBP3-210ENST00000525990 ALKBH7Q9BT30 221 aaPredicted RBP7.29□□□□□ -1.24
SSBP3-210ENST00000525990 LRP2P98164 4655 aa7.29□□□□□ -1.24
SSBP3-210ENST00000525990 H0Y9J4 135 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms