RNA–Protein interactions for RNA: ENST00000525725.5

PACSIN3-203, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-203ENST00000525725 TIMM21Q9BVV7 248 aa13.15□□□□□ -0.3
PACSIN3-203ENST00000525725 ZNF561-AS1K7EIQ3 104 aa13.14□□□□□ -0.31
PACSIN3-203ENST00000525725 Q6ZUT4 128 aa13.14□□□□□ -0.31
PACSIN3-203ENST00000525725 IGLV4-69A0A075B6H9 119 aa13.13□□□□□ -0.31
PACSIN3-203ENST00000525725 LOC389332A0A1B0GUA5 103 aa13.13□□□□□ -0.31
PACSIN3-203ENST00000525725 COX7A2LO14548 114 aa13.13□□□□□ -0.31
PACSIN3-203ENST00000525725 APOC3P02656 99 aa13.13□□□□□ -0.31
PACSIN3-203ENST00000525725 S100PP25815 95 aa13.13□□□□□ -0.31
PACSIN3-203ENST00000525725 SMAGPQ0VAQ4 97 aa13.13□□□□□ -0.31
PACSIN3-203ENST00000525725 RHEBQ15382 184 aa13.13□□□□□ -0.31
PACSIN3-203ENST00000525725 TRAV9-1A0A075B6T8 112 aa13.12□□□□□ -0.31
PACSIN3-203ENST00000525725 RNASE13Q5GAN3 156 aaKnown RBP13.12□□□□□ -0.31
PACSIN3-203ENST00000525725 FAM104AQ969W3 186 aa13.12□□□□□ -0.31
PACSIN3-203ENST00000525725 LOC107984640A0A0U1RRK4 108 aa13.11□□□□□ -0.31
PACSIN3-203ENST00000525725 RPL39P62891 51 aaKnown RBP13.11□□□□□ -0.31
PACSIN3-203ENST00000525725 KIAA1644Q3SXP7 199 aa13.11□□□□□ -0.31
PACSIN3-203ENST00000525725 SPINK6Q6UWN8 80 aa13.11□□□□□ -0.31
PACSIN3-203ENST00000525725 A0A0J9YXV3 536 aa13.1□□□□□ -0.31
PACSIN3-203ENST00000525725 SRSF9Q13242 221 aaKnown RBP eCLIP13.1□□□□□ -0.31
PACSIN3-203ENST00000525725 C2orf48Q96LS8 159 aa13.1□□□□□ -0.31
PACSIN3-203ENST00000525725 MAP1LC3AQ9H492 121 aa13.1□□□□□ -0.31
PACSIN3-203ENST00000525725 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.09□□□□□ -0.31
PACSIN3-203ENST00000525725 APOMO95445 188 aa13.09□□□□□ -0.31
PACSIN3-203ENST00000525725 Q6ZRP5 223 aa13.09□□□□□ -0.31
PACSIN3-203ENST00000525725 LAMTOR2Q9Y2Q5 125 aa13.09□□□□□ -0.31
PACSIN3-203ENST00000525725 TRAV13-1A0A0B4J241 112 aa13.08□□□□□ -0.32
PACSIN3-203ENST00000525725 PRSS47A8MTI9 375 aa13.08□□□□□ -0.32
PACSIN3-203ENST00000525725 RAB5AP20339 215 aa13.08□□□□□ -0.32
PACSIN3-203ENST00000525725 MALP21145 153 aa13.08□□□□□ -0.32
PACSIN3-203ENST00000525725 TMEM18Q96B42 140 aa13.08□□□□□ -0.32
PACSIN3-203ENST00000525725 NDUFA5Q16718 116 aa13.07□□□□□ -0.32
PACSIN3-203ENST00000525725 CAMK2N2Q96S95 79 aa13.07□□□□□ -0.32
PACSIN3-203ENST00000525725 KRTAP10-8P60410 259 aa13.06□□□□□ -0.32
PACSIN3-203ENST00000525725 SVBPQ8N300 66 aa13.06□□□□□ -0.32
PACSIN3-203ENST00000525725 OPRPNQ99935 248 aaPredicted RBP13.06□□□□□ -0.32
PACSIN3-203ENST00000525725 GNB1LQ9BYB4 327 aa13.06□□□□□ -0.32
PACSIN3-203ENST00000525725 TGIF2-C20orf24A0A0A6YYL0 155 aa13.05□□□□□ -0.32
PACSIN3-203ENST00000525725 A0A1W2PNN7 141 aa13.05□□□□□ -0.32
PACSIN3-203ENST00000525725 SPAG11BQ08648 103 aa13.05□□□□□ -0.32
PACSIN3-203ENST00000525725 Q8N8P6 123 aa13.05□□□□□ -0.32
PACSIN3-203ENST00000525725 OR10D4PQ8NGN7 298 aa13.05□□□□□ -0.32
PACSIN3-203ENST00000525725 SPANXA1Q9NS26 97 aa13.05□□□□□ -0.32
PACSIN3-203ENST00000525725 IGHV3OR16-9A0A0B4J2B5 98 aa13.04□□□□□ -0.32
PACSIN3-203ENST00000525725 SNAPINO95295 136 aa13.04□□□□□ -0.32
PACSIN3-203ENST00000525725 MRPS36P82909 103 aaKnown RBP13.04□□□□□ -0.32
PACSIN3-203ENST00000525725 GAGE2BQ13066 116 aa13.04□□□□□ -0.32
PACSIN3-203ENST00000525725 ODF1Q14990 250 aa13.04□□□□□ -0.32
PACSIN3-203ENST00000525725 RNF151Q2KHN1 245 aa13.04□□□□□ -0.32
PACSIN3-203ENST00000525725 REG3GQ6UW15 175 aa13.04□□□□□ -0.32
PACSIN3-203ENST00000525725 C5orf38Q86SI9 138 aa13.04□□□□□ -0.32
PACSIN3-203ENST00000525725 SLC7A5P1Q8MH63 180 aa13.04□□□□□ -0.32
PACSIN3-203ENST00000525725 IFI27P40305 119 aaPredicted RBP13.03□□□□□ -0.32
PACSIN3-203ENST00000525725 C9orf116Q5BN46 136 aaPredicted RBP13.01□□□□□ -0.33
PACSIN3-203ENST00000525725 MRPL18Q9H0U6 180 aaKnown RBP13.01□□□□□ -0.33
PACSIN3-203ENST00000525725 MRPL35Q9NZE8 188 aaKnown RBP13.01□□□□□ -0.33
PACSIN3-203ENST00000525725 FABP9Q0Z7S8 132 aa13□□□□□ -0.33
PACSIN3-203ENST00000525725 COX19Q49B96 90 aa13□□□□□ -0.33
PACSIN3-203ENST00000525725 ALKBH7Q9BT30 221 aaPredicted RBP13□□□□□ -0.33
PACSIN3-203ENST00000525725 F8WDY8 70 aa12.99□□□□□ -0.33
PACSIN3-203ENST00000525725 RPL18AQ02543 176 aaKnown RBP12.99□□□□□ -0.33
PACSIN3-203ENST00000525725 NXT2Q9NPJ8 142 aaKnown RBP12.99□□□□□ -0.33
PACSIN3-203ENST00000525725 PSORS1C2Q9UIG4 136 aa12.99□□□□□ -0.33
PACSIN3-203ENST00000525725 MT-ND6P03923 174 aa12.98□□□□□ -0.33
PACSIN3-203ENST00000525725 ORAOV1Q8WV07 137 aa12.98□□□□□ -0.33
PACSIN3-203ENST00000525725 ORMDL2Q53FV1 153 aa12.97□□□□□ -0.33
PACSIN3-203ENST00000525725 C2orf66Q6UXQ4 117 aa12.97□□□□□ -0.33
PACSIN3-203ENST00000525725 IGLV4-3A0A075B6K6 122 aa12.96□□□□□ -0.33
PACSIN3-203ENST00000525725 IFITM10A6NMD0 228 aa12.96□□□□□ -0.33
PACSIN3-203ENST00000525725 TLX1NBP0CAT3 122 aa12.96□□□□□ -0.33
PACSIN3-203ENST00000525725 CYSLTR1Q9Y271 337 aa12.96□□□□□ -0.33
PACSIN3-203ENST00000525725 PYGO1Q9Y3Y4 419 aa12.96□□□□□ -0.33
PACSIN3-203ENST00000525725 TRAPPC1Q9Y5R8 145 aa12.95□□□□□ -0.34
PACSIN3-203ENST00000525725 K7EMI3 77 aa12.94□□□□□ -0.34
PACSIN3-203ENST00000525725 NDUFA1O15239 70 aa12.94□□□□□ -0.34
PACSIN3-203ENST00000525725 C10orf25Q5T742 122 aa12.94□□□□□ -0.34
PACSIN3-203ENST00000525725 ZC2HC1BQ5TFG8 222 aa12.94□□□□□ -0.34
PACSIN3-203ENST00000525725 PHF5AQ7RTV0 110 aaKnown RBP12.94□□□□□ -0.34
PACSIN3-203ENST00000525725 A0A087WZ39 114 aa12.93□□□□□ -0.34
PACSIN3-203ENST00000525725 YPEL4Q96NS1 127 aa12.93□□□□□ -0.34
PACSIN3-203ENST00000525725 C6orf48Q9UBA6 75 aa12.93□□□□□ -0.34
PACSIN3-203ENST00000525725 KIAA0087Q14695 138 aa12.92□□□□□ -0.34
PACSIN3-203ENST00000525725 IGIPA6NJ69 53 aa12.91□□□□□ -0.34
PACSIN3-203ENST00000525725 CBLN2Q8IUK8 224 aa12.91□□□□□ -0.34
PACSIN3-203ENST00000525725 TMEM141Q96I45 108 aa12.91□□□□□ -0.34
PACSIN3-203ENST00000525725 FAM168BA1KXE4 195 aa12.9□□□□□ -0.34
PACSIN3-203ENST00000525725 LINC00242Q5T6M2 205 aa12.9□□□□□ -0.34
PACSIN3-203ENST00000525725 UNQ6190/PRO20217Q6UXQ8 127 aa12.9□□□□□ -0.34
PACSIN3-203ENST00000525725 KRTAP11-1Q8IUC1 163 aa12.9□□□□□ -0.34
PACSIN3-203ENST00000525725 LPAP08519 4548 aa12.89□□□□□ -0.35
PACSIN3-203ENST00000525725 KRTAP7-1Q8IUC3 87 aa12.89□□□□□ -0.35
PACSIN3-203ENST00000525725 TOMM6Q96B49 74 aa12.89□□□□□ -0.35
PACSIN3-203ENST00000525725 LINC01546A6NGU7 62 aa12.88□□□□□ -0.35
PACSIN3-203ENST00000525725 C1orf137Q5JT78 98 aa12.88□□□□□ -0.35
PACSIN3-203ENST00000525725 TEX43Q6ZNM6 134 aa12.88□□□□□ -0.35
PACSIN3-203ENST00000525725 LINC00173Q6ZV60 143 aa12.88□□□□□ -0.35
PACSIN3-203ENST00000525725 FA2HQ7L5A8 372 aa12.88□□□□□ -0.35
PACSIN3-203ENST00000525725 SMCO4Q9NRQ5 59 aa12.88□□□□□ -0.35
PACSIN3-203ENST00000525725 IGLV7-43P04211 117 aa12.87□□□□□ -0.35
PACSIN3-203ENST00000525725 Q6ZN92 141 aa12.87□□□□□ -0.35
PACSIN3-203ENST00000525725 VCX2Q9H322 139 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms