RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 C7orf65Q6ZTY9 151 aa10.03□□□□□ -0.8
LRRK1-202ENST00000525284 Q6ZSV7 163 aa10.03□□□□□ -0.8
LRRK1-202ENST00000525284 Q8N6K4 173 aa10.03□□□□□ -0.8
LRRK1-202ENST00000525284 LELP1Q5T871 98 aa10.03□□□□□ -0.8
LRRK1-202ENST00000525284 PRR3P79522 188 aaKnown RBP10.02□□□□□ -0.8
LRRK1-202ENST00000525284 C9orf116Q5BN46 136 aaPredicted RBP10.02□□□□□ -0.8
LRRK1-202ENST00000525284 TRBV10-3A0A0K0K1G6 114 aa10.02□□□□□ -0.8
LRRK1-202ENST00000525284 KIAA1549LQ6ZVL6 1849 aa10.02□□□□□ -0.81
LRRK1-202ENST00000525284 IGKV2D-30A0A075B6S6 120 aa10.02□□□□□ -0.81
LRRK1-202ENST00000525284 A0A087WSZ3 146 aa10.02□□□□□ -0.81
LRRK1-202ENST00000525284 IGKV2-30P06310 120 aa10.02□□□□□ -0.81
LRRK1-202ENST00000525284 PRM2P04554 102 aa10.01□□□□□ -0.81
LRRK1-202ENST00000525284 Q9BRP9 147 aa10.01□□□□□ -0.81
LRRK1-202ENST00000525284 LIMD2Q9BT23 127 aa10.01□□□□□ -0.81
LRRK1-202ENST00000525284 YPEL4Q96NS1 127 aa10.01□□□□□ -0.81
LRRK1-202ENST00000525284 CACNA1HO95180 2353 aa10□□□□□ -0.81
LRRK1-202ENST00000525284 NUPR2A6NF83 97 aa10□□□□□ -0.81
LRRK1-202ENST00000525284 Q8IZM0 81 aa10□□□□□ -0.81
LRRK1-202ENST00000525284 UNQ6190/PRO20217Q6UXQ8 127 aa10□□□□□ -0.81
LRRK1-202ENST00000525284 C1orf64Q8NEQ6 169 aa10□□□□□ -0.81
LRRK1-202ENST00000525284 C11orf1Q9H5F2 150 aa10□□□□□ -0.81
LRRK1-202ENST00000525284 MSMPQ1L6U9 139 aa9.99□□□□□ -0.81
LRRK1-202ENST00000525284 hDV103S1A0JD37 113 aa9.99□□□□□ -0.81
LRRK1-202ENST00000525284 C6orf223Q8N319 242 aa9.99□□□□□ -0.81
LRRK1-202ENST00000525284 NUP210Q8TEM1 1887 aaPredicted RBP9.99□□□□□ -0.81
LRRK1-202ENST00000525284 CXCL6P80162 114 aa9.98□□□□□ -0.81
LRRK1-202ENST00000525284 COL4A3Q01955 1670 aa9.98□□□□□ -0.81
LRRK1-202ENST00000525284 LINC01556Q5JQF7 62 aa9.96□□□□□ -0.81
LRRK1-202ENST00000525284 Q6YL49 198 aa9.96□□□□□ -0.81
LRRK1-202ENST00000525284 C10orf99Q6UWK7 81 aa9.96□□□□□ -0.82
LRRK1-202ENST00000525284 IGLV8-61A0A075B6I0 122 aa9.96□□□□□ -0.82
LRRK1-202ENST00000525284 GAS8-AS1O95177 125 aa9.96□□□□□ -0.82
LRRK1-202ENST00000525284 MED13LQ71F56 2210 aa9.96□□□□□ -0.82
LRRK1-202ENST00000525284 C4orf26Q17RF5 130 aa9.95□□□□□ -0.82
LRRK1-202ENST00000525284 ZNF702PQ9H963 129 aa9.95□□□□□ -0.82
LRRK1-202ENST00000525284 ATP11AUNQ6ZP68 121 aa9.95□□□□□ -0.82
LRRK1-202ENST00000525284 CDC42SE2Q9NRR3 84 aa9.95□□□□□ -0.82
LRRK1-202ENST00000525284 PLA2G2CQ5R387 149 aa9.95□□□□□ -0.82
LRRK1-202ENST00000525284 FSHBP01225 129 aa9.95□□□□□ -0.82
LRRK1-202ENST00000525284 C8orf87E5RJ46 101 aa9.94□□□□□ -0.82
LRRK1-202ENST00000525284 DENND4AQ7Z401 1863 aa9.94□□□□□ -0.82
LRRK1-202ENST00000525284 ODF3BA8MYP8 253 aa9.94□□□□□ -0.82
LRRK1-202ENST00000525284 ZNF106Q9H2Y7 1883 aaKnown RBP9.94□□□□□ -0.82
LRRK1-202ENST00000525284 PRRC2AP48634 2157 aaKnown RBP9.94□□□□□ -0.82
LRRK1-202ENST00000525284 OBSL1O75147 1896 aa9.94□□□□□ -0.82
LRRK1-202ENST00000525284 PRR9Q5T870 116 aa9.93□□□□□ -0.82
LRRK1-202ENST00000525284 SSBP3-AS1Q7Z2R9 100 aa9.92□□□□□ -0.82
LRRK1-202ENST00000525284 NBASA2RRP1 2371 aa9.92□□□□□ -0.82
LRRK1-202ENST00000525284 PRORYQ9H606 182 aa9.92□□□□□ -0.82
LRRK1-202ENST00000525284 P0C879 139 aa9.92□□□□□ -0.82
LRRK1-202ENST00000525284 MUC7Q8TAX7 377 aa9.91□□□□□ -0.82
LRRK1-202ENST00000525284 PCNX1Q96RV3 2341 aa9.91□□□□□ -0.82
LRRK1-202ENST00000525284 IGLV5-52A0A0A0MRZ9 124 aa9.91□□□□□ -0.82
LRRK1-202ENST00000525284 POLR2KP53803 58 aaKnown RBP9.91□□□□□ -0.82
LRRK1-202ENST00000525284 EGFEM1PQ0D2K5 195 aa9.91□□□□□ -0.82
LRRK1-202ENST00000525284 COX6A2Q02221 97 aa9.91□□□□□ -0.82
LRRK1-202ENST00000525284 SMIM29Q86T20 159 aa9.91□□□□□ -0.82
LRRK1-202ENST00000525284 C2orf16Q68DN1 1984 aa9.91□□□□□ -0.82
LRRK1-202ENST00000525284 C11orf21Q9P2W6 132 aa9.9□□□□□ -0.82
LRRK1-202ENST00000525284 MRGPRG-AS1Q2M3A8 158 aa9.9□□□□□ -0.82
LRRK1-202ENST00000525284 SORL1Q92673 2214 aa9.9□□□□□ -0.82
LRRK1-202ENST00000525284 LINC00242Q5T6M2 205 aa9.9□□□□□ -0.82
LRRK1-202ENST00000525284 ALPK3Q96L96 1907 aa9.9□□□□□ -0.82
LRRK1-202ENST00000525284 IGFL2Q6UWQ7 119 aa9.9□□□□□ -0.82
LRRK1-202ENST00000525284 C1orf229Q6ZS94 237 aaPredicted RBP9.9□□□□□ -0.82
LRRK1-202ENST00000525284 C2orf48Q96LS8 159 aa9.9□□□□□ -0.82
LRRK1-202ENST00000525284 LINC00846Q9NV44 126 aa9.9□□□□□ -0.83
LRRK1-202ENST00000525284 SHISA2Q6UWI4 295 aa9.89□□□□□ -0.83
LRRK1-202ENST00000525284 LINC00337Q8N6G1 96 aa9.89□□□□□ -0.83
LRRK1-202ENST00000525284 BRWD1-AS2P59051 145 aa9.89□□□□□ -0.83
LRRK1-202ENST00000525284 PIP4P1Q86T03 277 aa9.89□□□□□ -0.83
LRRK1-202ENST00000525284 LMO4P61968 165 aa9.89□□□□□ -0.83
LRRK1-202ENST00000525284 ACYP2P14621 99 aa9.88□□□□□ -0.83
LRRK1-202ENST00000525284 FSTL3O95633 263 aa9.88□□□□□ -0.83
LRRK1-202ENST00000525284 A8MTW9 85 aa9.88□□□□□ -0.83
LRRK1-202ENST00000525284 SMIM1B2RUZ4 78 aa9.88□□□□□ -0.83
LRRK1-202ENST00000525284 Q6ZTC4 211 aa9.88□□□□□ -0.83
LRRK1-202ENST00000525284 C18orf65Q6ZTR6 163 aa9.87□□□□□ -0.83
LRRK1-202ENST00000525284 FREM1Q5H8C1 2179 aa9.87□□□□□ -0.83
LRRK1-202ENST00000525284 PTPRQQ9UMZ3 2332 aa9.87□□□□□ -0.83
LRRK1-202ENST00000525284 ADAMTSL4-AS1Q5T5F5 129 aa9.86□□□□□ -0.83
LRRK1-202ENST00000525284 ZNF295-AS1Q8N0V1 137 aa9.86□□□□□ -0.83
LRRK1-202ENST00000525284 IGIPA6NJ69 53 aa9.86□□□□□ -0.83
LRRK1-202ENST00000525284 TSPEAR-AS2P59090 65 aa9.85□□□□□ -0.83
LRRK1-202ENST00000525284 C6orf48Q9UBA6 75 aa9.85□□□□□ -0.83
LRRK1-202ENST00000525284 MED12LQ86YW9 2145 aa9.85□□□□□ -0.83
LRRK1-202ENST00000525284 NCOA6Q14686 2063 aaPredicted RBP9.84□□□□□ -0.83
LRRK1-202ENST00000525284 MUC4Q99102 2169 aa9.84□□□□□ -0.83
LRRK1-202ENST00000525284 LY6G6DO95868 133 aa9.83□□□□□ -0.84
LRRK1-202ENST00000525284 KLLNB2CW77 178 aa9.83□□□□□ -0.84
LRRK1-202ENST00000525284 IGLV4-60A0A075B6I1 120 aa9.83□□□□□ -0.84
LRRK1-202ENST00000525284 ZNF580Q9UK33 172 aa9.82□□□□□ -0.84
LRRK1-202ENST00000525284 MDFIQ99750 246 aa9.82□□□□□ -0.84
LRRK1-202ENST00000525284 WISP2O76076 250 aa9.8□□□□□ -0.84
LRRK1-202ENST00000525284 C19orf84I3L1E1 186 aa9.8□□□□□ -0.84
LRRK1-202ENST00000525284 OXLD1Q5BKU9 147 aa9.79□□□□□ -0.84
LRRK1-202ENST00000525284 SPACA4Q8TDM5 124 aa9.79□□□□□ -0.84
LRRK1-202ENST00000525284 CHCHD7Q9BUK0 85 aa9.79□□□□□ -0.84
LRRK1-202ENST00000525284 LINC00574Q9H8X3 128 aa9.78□□□□□ -0.84
LRRK1-202ENST00000525284 Q6ZPA2 131 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms