RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 BTAF1O14981 1849 aa0.59□□□□□ -2.32
COPB1-203ENST00000525214 PLXNB2O15031 1838 aa0.59□□□□□ -2.32
COPB1-203ENST00000525214 SBF2Q86WG5 1849 aa0.59□□□□□ -2.32
COPB1-203ENST00000525214 KDM5AP29375 1690 aaKnown RBP0.59□□□□□ -2.32
COPB1-203ENST00000525214 POLQO75417 2590 aa0.58□□□□□ -2.32
COPB1-203ENST00000525214 APCP25054 2843 aa0.58□□□□□ -2.32
COPB1-203ENST00000525214 A0A0G2JND7 137 aa0.58□□□□□ -2.32
COPB1-203ENST00000525214 M0R3E3 92 aa0.58□□□□□ -2.32
COPB1-203ENST00000525214 FAM223AQ8IWN6 122 aa0.58□□□□□ -2.32
COPB1-203ENST00000525214 CACFD1Q9UGQ2 172 aa0.58□□□□□ -2.32
COPB1-203ENST00000525214 ARHGEF5Q12774 1597 aa0.57□□□□□ -2.32
COPB1-203ENST00000525214 ABCA12Q86UK0 2595 aa0.57□□□□□ -2.32
COPB1-203ENST00000525214 WNK3Q9BYP7 1800 aa0.57□□□□□ -2.32
COPB1-203ENST00000525214 TRBV25-1A0A075B6N4 114 aa0.57□□□□□ -2.32
COPB1-203ENST00000525214 TRBV7-7A0A0K0K1E9 115 aa0.57□□□□□ -2.32
COPB1-203ENST00000525214 A0A1B0GWA3 101 aa0.57□□□□□ -2.32
COPB1-203ENST00000525214 GYPAP02724 150 aa0.57□□□□□ -2.32
COPB1-203ENST00000525214 UQCRHP07919 91 aa0.57□□□□□ -2.32
COPB1-203ENST00000525214 PMCHL1Q16048 86 aa0.57□□□□□ -2.32
COPB1-203ENST00000525214 SPRR4Q96PI1 79 aa0.57□□□□□ -2.32
COPB1-203ENST00000525214 LINC00472Q9H8W2 130 aa0.57□□□□□ -2.32
COPB1-203ENST00000525214 KDM3BQ7LBC6 1761 aa0.57□□□□□ -2.32
COPB1-203ENST00000525214 IGF2RP11717 2491 aa0.57□□□□□ -2.32
COPB1-203ENST00000525214 TTC28Q96AY4 2481 aa0.57□□□□□ -2.32
COPB1-203ENST00000525214 BAZ1AQ9NRL2 1556 aaPredicted RBP0.57□□□□□ -2.32
COPB1-203ENST00000525214 ZNF292O60281 2723 aa0.57□□□□□ -2.32
COPB1-203ENST00000525214 SPTBN1Q01082 2364 aaKnown RBP0.56□□□□□ -2.32
COPB1-203ENST00000525214 COL4A6Q14031 1691 aa0.56□□□□□ -2.32
COPB1-203ENST00000525214 USF3Q68DE3 2245 aa0.56□□□□□ -2.32
COPB1-203ENST00000525214 EPRSP07814 1512 aaKnown RBP0.56□□□□□ -2.32
COPB1-203ENST00000525214 ARHGEF12Q9NZN5 1544 aa0.56□□□□□ -2.32
COPB1-203ENST00000525214 UQCRHLA0A096LP55 91 aa0.56□□□□□ -2.32
COPB1-203ENST00000525214 A0A0D9SFI3 127 aa0.56□□□□□ -2.32
COPB1-203ENST00000525214 SYS1-DBNDD2H3BUS1 97 aa0.56□□□□□ -2.32
COPB1-203ENST00000525214 H7BZZ5 65 aa0.56□□□□□ -2.32
COPB1-203ENST00000525214 HAMPP81172 84 aa0.56□□□□□ -2.32
COPB1-203ENST00000525214 COX6A2Q02221 97 aa0.56□□□□□ -2.32
COPB1-203ENST00000525214 Q6JHZ5 121 aa0.56□□□□□ -2.32
COPB1-203ENST00000525214 TMEM263Q8WUH6 116 aaKnown RBP0.56□□□□□ -2.32
COPB1-203ENST00000525214 PRO1933Q9H354 126 aa0.56□□□□□ -2.32
COPB1-203ENST00000525214 LINC00846Q9NV44 126 aa0.56□□□□□ -2.32
COPB1-203ENST00000525214 PLAC8Q9NZF1 115 aa0.56□□□□□ -2.32
COPB1-203ENST00000525214 MYH4Q9Y623 1939 aa0.56□□□□□ -2.32
COPB1-203ENST00000525214 PIEZO1Q92508 2521 aa0.56□□□□□ -2.32
COPB1-203ENST00000525214 MARF1Q9Y4F3 1742 aaKnown RBP0.55□□□□□ -2.32
COPB1-203ENST00000525214 PLEKHH2Q8IVE3 1493 aa0.55□□□□□ -2.32
COPB1-203ENST00000525214 RAPGEF2Q9Y4G8 1499 aa0.55□□□□□ -2.32
COPB1-203ENST00000525214 TPRP12270 2363 aaKnown RBP0.55□□□□□ -2.32
COPB1-203ENST00000525214 ABCC2Q92887 1545 aa0.55□□□□□ -2.32
COPB1-203ENST00000525214 RB1CC1Q8TDY2 1594 aa0.55□□□□□ -2.32
COPB1-203ENST00000525214 PVALEFA0A1B0GWK0 134 aa0.55□□□□□ -2.32
COPB1-203ENST00000525214 FAM223BA6NKX1 122 aa0.55□□□□□ -2.32
COPB1-203ENST00000525214 PSMG4Q5JS54 123 aa0.55□□□□□ -2.32
COPB1-203ENST00000525214 SSBP3-AS1Q7Z2R9 100 aa0.55□□□□□ -2.32
COPB1-203ENST00000525214 C9orf62Q8N4C0 152 aa0.55□□□□□ -2.32
COPB1-203ENST00000525214 C20orf78Q9BR46 151 aa0.55□□□□□ -2.32
COPB1-203ENST00000525214 CNFNQ9BYD5 112 aa0.55□□□□□ -2.32
COPB1-203ENST00000525214 GVINP1Q7Z2Y8 2422 aa0.55□□□□□ -2.32
COPB1-203ENST00000525214 MEGF8Q7Z7M0 2845 aa0.55□□□□□ -2.32
COPB1-203ENST00000525214 FANCAO15360 1455 aa0.54□□□□□ -2.32
COPB1-203ENST00000525214 IQSEC2Q5JU85 1478 aa0.54□□□□□ -2.32
COPB1-203ENST00000525214 KCPQ6ZWJ8 1503 aa0.54□□□□□ -2.32
COPB1-203ENST00000525214 PTPRQQ9UMZ3 2332 aa0.54□□□□□ -2.32
COPB1-203ENST00000525214 ANK2Q01484 3957 aa0.54□□□□□ -2.32
COPB1-203ENST00000525214 C7orf77A4D0Y5 90 aa0.54□□□□□ -2.32
COPB1-203ENST00000525214 ZNF815PA8K554 130 aa0.54□□□□□ -2.32
COPB1-203ENST00000525214 SPCS1Q9Y6A9 102 aa0.54□□□□□ -2.32
COPB1-203ENST00000525214 KIAA1551Q9HCM1 1747 aa0.54□□□□□ -2.32
COPB1-203ENST00000525214 PTPRZ1P23471 2315 aaPredicted RBP0.54□□□□□ -2.32
COPB1-203ENST00000525214 ABCC3O15438 1527 aa0.54□□□□□ -2.32
COPB1-203ENST00000525214 ERCC6L2Q5T890 1561 aa0.53□□□□□ -2.32
COPB1-203ENST00000525214 CLTCQ00610 1675 aaKnown RBP0.53□□□□□ -2.32
COPB1-203ENST00000525214 SCN7AQ01118 1682 aa0.53□□□□□ -2.32
COPB1-203ENST00000525214 AKAP6Q13023 2319 aa0.53□□□□□ -2.32
COPB1-203ENST00000525214 BCE1O60756 84 aa0.53□□□□□ -2.32
COPB1-203ENST00000525214 HMGN3Q15651 99 aa0.53□□□□□ -2.32
COPB1-203ENST00000525214 PYY3Q5JQD4 70 aa0.53□□□□□ -2.32
COPB1-203ENST00000525214 HIGD1BQ9P298 99 aa0.53□□□□□ -2.32
COPB1-203ENST00000525214 USP24Q9UPU5 2620 aa0.53□□□□□ -2.32
COPB1-203ENST00000525214 ATP10BO94823 1461 aa0.53□□□□□ -2.33
COPB1-203ENST00000525214 FRAS1Q86XX4 4008 aa0.53□□□□□ -2.33
COPB1-203ENST00000525214 LRP6O75581 1613 aa0.53□□□□□ -2.33
COPB1-203ENST00000525214 NUP188Q5SRE5 1749 aa0.52□□□□□ -2.33
COPB1-203ENST00000525214 RGPD4Q7Z3J3 1758 aa0.52□□□□□ -2.33
COPB1-203ENST00000525214 TNCP24821 2201 aa0.52□□□□□ -2.33
COPB1-203ENST00000525214 TRBV6-1A0A0K0K1D8 114 aa0.52□□□□□ -2.33
COPB1-203ENST00000525214 H3BQF6 201 aa0.52□□□□□ -2.33
COPB1-203ENST00000525214 SMIM11AP58511 58 aa0.52□□□□□ -2.33
COPB1-203ENST00000525214 C10orf113Q5VZT2 155 aa0.52□□□□□ -2.33
COPB1-203ENST00000525214 ZNF720Q7Z2F6 126 aa0.52□□□□□ -2.33
COPB1-203ENST00000525214 FDCSPQ8NFU4 85 aa0.52□□□□□ -2.33
COPB1-203ENST00000525214 CHD9Q3L8U1 2897 aa0.52□□□□□ -2.33
COPB1-203ENST00000525214 ANKRD36A6QL64 1941 aa0.52□□□□□ -2.33
COPB1-203ENST00000525214 PKDREJQ9NTG1 2253 aa0.52□□□□□ -2.33
COPB1-203ENST00000525214 A0A087WVE0 104 aa0.51□□□□□ -2.33
COPB1-203ENST00000525214 K7EP34 96 aa0.51□□□□□ -2.33
COPB1-203ENST00000525214 SCRIBQ14160 1630 aa0.51□□□□□ -2.33
COPB1-203ENST00000525214 CEP162Q5TB80 1403 aa0.51□□□□□ -2.33
COPB1-203ENST00000525214 ALKAL2Q6UX46 152 aa0.51□□□□□ -2.33
COPB1-203ENST00000525214 LCN9Q8WX39 176 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms