RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 MRPL35Q9NZE8 188 aaKnown RBP4.48□□□□□ -1.69
NUP98-213ENST00000524563 CHTOPQ9Y3Y2 248 aaKnown RBP4.48□□□□□ -1.69
NUP98-213ENST00000524563 TNFRSF18Q9Y5U5 241 aa4.48□□□□□ -1.69
NUP98-213ENST00000524563 TRBV25-1A0A075B6N4 114 aa4.47□□□□□ -1.69
NUP98-213ENST00000524563 TRBV27A0A0K0K1C4 114 aa4.47□□□□□ -1.69
NUP98-213ENST00000524563 LOC100131303A0A0U1RQF7 123 aa4.47□□□□□ -1.69
NUP98-213ENST00000524563 A0A1B0GWB2 263 aa4.47□□□□□ -1.69
NUP98-213ENST00000524563 A0A1W2PPM0 123 aa4.47□□□□□ -1.69
NUP98-213ENST00000524563 F8VRH5 84 aa4.47□□□□□ -1.69
NUP98-213ENST00000524563 I3L3M4 83 aa4.47□□□□□ -1.69
NUP98-213ENST00000524563 K7EQD1 137 aa4.47□□□□□ -1.69
NUP98-213ENST00000524563 PAX4O43316 350 aa4.47□□□□□ -1.69
NUP98-213ENST00000524563 FUSP35637 526 aaKnown RBP eCLIP4.47□□□□□ -1.69
NUP98-213ENST00000524563 NMUP48645 174 aa4.47□□□□□ -1.69
NUP98-213ENST00000524563 ESRGQ1W209 222 aa4.47□□□□□ -1.69
NUP98-213ENST00000524563 ERASQ7Z444 233 aa4.47□□□□□ -1.69
NUP98-213ENST00000524563 NFE4Q86UQ8 179 aa4.47□□□□□ -1.69
NUP98-213ENST00000524563 NEXN-AS1Q8NBZ9 246 aa4.47□□□□□ -1.69
NUP98-213ENST00000524563 TMEM141Q96I45 108 aa4.47□□□□□ -1.69
NUP98-213ENST00000524563 TRBV7-3A0A075B6L6 115 aa4.46□□□□□ -1.7
NUP98-213ENST00000524563 GAGE10A6NGK3 116 aa4.46□□□□□ -1.7
NUP98-213ENST00000524563 PSCAO43653 123 aa4.46□□□□□ -1.7
NUP98-213ENST00000524563 DNAH10OSP0CZ25 163 aa4.46□□□□□ -1.7
NUP98-213ENST00000524563 GYPEP15421 78 aa4.46□□□□□ -1.7
NUP98-213ENST00000524563 FXYD2P54710 66 aa4.46□□□□□ -1.7
NUP98-213ENST00000524563 PAPPA-AS1Q5QFB9 102 aa4.46□□□□□ -1.7
NUP98-213ENST00000524563 ZC2HC1BQ5TFG8 222 aa4.46□□□□□ -1.7
NUP98-213ENST00000524563 CEND1Q8N111 149 aa4.46□□□□□ -1.7
NUP98-213ENST00000524563 SLC25A29Q8N8R3 303 aa4.46□□□□□ -1.7
NUP98-213ENST00000524563 DEFB104AQ8WTQ1 72 aa4.46□□□□□ -1.7
NUP98-213ENST00000524563 BAALCQ8WXS3 180 aa4.46□□□□□ -1.7
NUP98-213ENST00000524563 DNAJC30Q96LL9 226 aa4.46□□□□□ -1.7
NUP98-213ENST00000524563 TIMM17AQ99595 171 aa4.46□□□□□ -1.7
NUP98-213ENST00000524563 TRBV6-4A0A1B0GX49 114 aa4.45□□□□□ -1.7
NUP98-213ENST00000524563 E9PLD3 99 aa4.45□□□□□ -1.7
NUP98-213ENST00000524563 H3BUT2 72 aa4.45□□□□□ -1.7
NUP98-213ENST00000524563 K7ERU9 68 aa4.45□□□□□ -1.7
NUP98-213ENST00000524563 CIDEAO60543 219 aa4.45□□□□□ -1.7
NUP98-213ENST00000524563 SMIM13P0DJ93 91 aa4.45□□□□□ -1.7
NUP98-213ENST00000524563 HERVK_113P61574 105 aa4.45□□□□□ -1.7
NUP98-213ENST00000524563 PMVKQ15126 192 aa4.45□□□□□ -1.7
NUP98-213ENST00000524563 MRPL23Q16540 153 aaKnown RBP4.45□□□□□ -1.7
NUP98-213ENST00000524563 Q6ZSN1 163 aa4.45□□□□□ -1.7
NUP98-213ENST00000524563 TSHBP01222 138 aa4.44□□□□□ -1.7
NUP98-213ENST00000524563 LINC00694P0DN24 101 aa4.44□□□□□ -1.7
NUP98-213ENST00000524563 FABP2P12104 132 aa4.44□□□□□ -1.7
NUP98-213ENST00000524563 PCP4P48539 62 aa4.44□□□□□ -1.7
NUP98-213ENST00000524563 RPL39P62891 51 aaKnown RBP4.44□□□□□ -1.7
NUP98-213ENST00000524563 RPL36AP83881 106 aaKnown RBP4.44□□□□□ -1.7
NUP98-213ENST00000524563 COTL1Q14019 142 aa4.44□□□□□ -1.7
NUP98-213ENST00000524563 LYPD5Q6UWN5 251 aa4.44□□□□□ -1.7
NUP98-213ENST00000524563 RPL36ALQ969Q0 106 aaKnown RBP4.44□□□□□ -1.7
NUP98-213ENST00000524563 Q9UF83 564 aa4.44□□□□□ -1.7
NUP98-213ENST00000524563 SPCS1Q9Y6A9 102 aa4.44□□□□□ -1.7
NUP98-213ENST00000524563 LRP1BQ9NZR2 4599 aa4.44□□□□□ -1.7
NUP98-213ENST00000524563 IGLV5-52A0A0A0MRZ9 124 aa4.43□□□□□ -1.7
NUP98-213ENST00000524563 MYMXA0A1B0GTQ4 84 aa4.43□□□□□ -1.7
NUP98-213ENST00000524563 IGIPA6NJ69 53 aa4.43□□□□□ -1.7
NUP98-213ENST00000524563 FAM229AH3BQW9 127 aa4.43□□□□□ -1.7
NUP98-213ENST00000524563 GCSHP23434 173 aa4.43□□□□□ -1.7
NUP98-213ENST00000524563 HAMPP81172 84 aa4.43□□□□□ -1.7
NUP98-213ENST00000524563 WFDC10BQ8IUB3 73 aa4.43□□□□□ -1.7
NUP98-213ENST00000524563 C10orf126Q8N4M7 172 aa4.43□□□□□ -1.7
NUP98-213ENST00000524563 C20orf203Q8NBC4 194 aa4.43□□□□□ -1.7
NUP98-213ENST00000524563 TTTY13Q9BZ97 58 aa4.43□□□□□ -1.7
NUP98-213ENST00000524563 APOBP04114 4563 aaKnown RBP4.43□□□□□ -1.7
NUP98-213ENST00000524563 DNAH8Q96JB1 4490 aa4.42□□□□□ -1.7
NUP98-213ENST00000524563 IGLV4-69A0A075B6H9 119 aa4.42□□□□□ -1.7
NUP98-213ENST00000524563 A0A087WTM6 91 aa4.42□□□□□ -1.7
NUP98-213ENST00000524563 IGHV3-38A0A0C4DH36 116 aa4.42□□□□□ -1.7
NUP98-213ENST00000524563 TRBV10-1A0A0K0K1A3 114 aa4.42□□□□□ -1.7
NUP98-213ENST00000524563 GAGE12JA6NER3 117 aa4.42□□□□□ -1.7
NUP98-213ENST00000524563 SMR3BP02814 79 aaPredicted RBP4.42□□□□□ -1.7
NUP98-213ENST00000524563 SMAGPQ0VAQ4 97 aa4.42□□□□□ -1.7
NUP98-213ENST00000524563 GAGE4Q13068 117 aa4.42□□□□□ -1.7
NUP98-213ENST00000524563 GAGE5Q13069 117 aa4.42□□□□□ -1.7
NUP98-213ENST00000524563 GAGE13Q4V321 117 aa4.42□□□□□ -1.7
NUP98-213ENST00000524563 PRADC1Q9BSG0 188 aa4.42□□□□□ -1.7
NUP98-213ENST00000524563 VCX2Q9H322 139 aa4.42□□□□□ -1.7
NUP98-213ENST00000524563 Q9HAA7 133 aa4.42□□□□□ -1.7
NUP98-213ENST00000524563 K7ERJ3 54 aa4.41□□□□□ -1.7
NUP98-213ENST00000524563 LCE2BO14633 110 aa4.41□□□□□ -1.7
NUP98-213ENST00000524563 GHRHP01286 108 aa4.41□□□□□ -1.7
NUP98-213ENST00000524563 UBE2D1P51668 147 aa4.41□□□□□ -1.7
NUP98-213ENST00000524563 KRTAP10-1P60331 282 aa4.41□□□□□ -1.7
NUP98-213ENST00000524563 TMEM170BQ5T4T1 132 aa4.41□□□□□ -1.7
NUP98-213ENST00000524563 DGAT2L7PQ6IED9 249 aa4.41□□□□□ -1.7
NUP98-213ENST00000524563 Q6ZRN7 208 aaPredicted RBP4.41□□□□□ -1.7
NUP98-213ENST00000524563 SPANXB1Q9NS25 103 aaPredicted RBP4.41□□□□□ -1.7
NUP98-213ENST00000524563 SPANXA1Q9NS26 97 aa4.41□□□□□ -1.7
NUP98-213ENST00000524563 PYGO1Q9Y3Y4 419 aa4.41□□□□□ -1.7
NUP98-213ENST00000524563 IGLV4-3A0A075B6K6 122 aa4.4□□□□□ -1.71
NUP98-213ENST00000524563 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.4□□□□□ -1.71
NUP98-213ENST00000524563 IGKV2-29A2NJV5 120 aaPredicted RBP4.4□□□□□ -1.71
NUP98-213ENST00000524563 C11orf86A6NJI1 115 aa4.4□□□□□ -1.71
NUP98-213ENST00000524563 F8W1H4 67 aa4.4□□□□□ -1.71
NUP98-213ENST00000524563 UBE2L6O14933 153 aa4.4□□□□□ -1.71
NUP98-213ENST00000524563 TIRAPP58753 221 aa4.4□□□□□ -1.71
NUP98-213ENST00000524563 UBE2D3P61077 147 aa4.4□□□□□ -1.71
NUP98-213ENST00000524563 UBE2D2P62837 147 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms