RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 UBE2D4Q9Y2X8 147 aa8.27□□□□□ -1.09
VEGFA-225ENST00000523950 IGLV10-54A0A075B6I4 117 aa8.26□□□□□ -1.09
VEGFA-225ENST00000523950 SYS1-DBNDD2H3BUS1 97 aa8.26□□□□□ -1.09
VEGFA-225ENST00000523950 LECT2O14960 151 aa8.26□□□□□ -1.09
VEGFA-225ENST00000523950 HNRNPA3P51991 378 aaKnown RBP8.26□□□□□ -1.09
VEGFA-225ENST00000523950 FA2HQ7L5A8 372 aa8.26□□□□□ -1.09
VEGFA-225ENST00000523950 PMCHL2Q9BQD1 86 aa8.26□□□□□ -1.09
VEGFA-225ENST00000523950 CDC42SE2Q9NRR3 84 aa8.26□□□□□ -1.09
VEGFA-225ENST00000523950 USP17L23D6RBM5 183 aa8.25□□□□□ -1.09
VEGFA-225ENST00000523950 CCL25O15444 150 aa8.25□□□□□ -1.09
VEGFA-225ENST00000523950 Q8N8P6 123 aa8.25□□□□□ -1.09
VEGFA-225ENST00000523950 PRSS3P2Q8NHM4 247 aa8.25□□□□□ -1.09
VEGFA-225ENST00000523950 URB1-AS1Q96HZ7 61 aa8.25□□□□□ -1.09
VEGFA-225ENST00000523950 DNAH5Q8TE73 4624 aa8.24□□□□□ -1.09
VEGFA-225ENST00000523950 Q6ZN92 141 aa8.24□□□□□ -1.09
VEGFA-225ENST00000523950 NXT2Q9NPJ8 142 aaKnown RBP8.24□□□□□ -1.09
VEGFA-225ENST00000523950 SPANXA1Q9NS26 97 aa8.24□□□□□ -1.09
VEGFA-225ENST00000523950 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.23□□□□□ -1.09
VEGFA-225ENST00000523950 IGKV3OR2-268A0A0C4DH90 116 aa8.23□□□□□ -1.09
VEGFA-225ENST00000523950 LINC00959A0A1B0GUT2 108 aa8.23□□□□□ -1.09
VEGFA-225ENST00000523950 LINC01546A6NGU7 62 aa8.23□□□□□ -1.09
VEGFA-225ENST00000523950 FUSP35637 526 aaKnown RBP eCLIP8.23□□□□□ -1.093e-8■□□□□ 10.5
VEGFA-225ENST00000523950 SS18Q15532 418 aa8.23□□□□□ -1.09
VEGFA-225ENST00000523950 LINC01545Q5VT33 79 aa8.23□□□□□ -1.09
VEGFA-225ENST00000523950 CHCHD10Q8WYQ3 142 aaPredicted RBP8.23□□□□□ -1.09
VEGFA-225ENST00000523950 LRP1BQ9NZR2 4599 aa8.23□□□□□ -1.09
VEGFA-225ENST00000523950 LOC389332A0A1B0GUA5 103 aa8.22□□□□□ -1.09
VEGFA-225ENST00000523950 GAGE12HA6NDE8 117 aa8.22□□□□□ -1.09
VEGFA-225ENST00000523950 G0S2P27469 103 aa8.22□□□□□ -1.09
VEGFA-225ENST00000523950 MRPS36P82909 103 aaKnown RBP8.22□□□□□ -1.09
VEGFA-225ENST00000523950 ORMDL2Q53FV1 153 aa8.22□□□□□ -1.09
VEGFA-225ENST00000523950 CFAP161Q6P656 301 aa8.22□□□□□ -1.09
VEGFA-225ENST00000523950 PYGO1Q9Y3Y4 419 aa8.22□□□□□ -1.09
VEGFA-225ENST00000523950 IFI27P40305 119 aaPredicted RBP8.21□□□□□ -1.1
VEGFA-225ENST00000523950 KRTAP10-1P60331 282 aa8.21□□□□□ -1.1
VEGFA-225ENST00000523950 Q6ZUT4 128 aa8.21□□□□□ -1.1
VEGFA-225ENST00000523950 HBDP02042 147 aa8.2□□□□□ -1.1
VEGFA-225ENST00000523950 RPL39P62891 51 aaKnown RBP8.2□□□□□ -1.1
VEGFA-225ENST00000523950 CD164L2Q6UWJ8 174 aa8.2□□□□□ -1.1
VEGFA-225ENST00000523950 CYSLTR1Q9Y271 337 aa8.2□□□□□ -1.1
VEGFA-225ENST00000523950 PRSS1P07477 247 aa8.19□□□□□ -1.1
VEGFA-225ENST00000523950 NPSP0C0P6 89 aa8.19□□□□□ -1.1
VEGFA-225ENST00000523950 XCL1P47992 114 aa8.19□□□□□ -1.1
VEGFA-225ENST00000523950 FOXI1Q12951 378 aa8.19□□□□□ -1.1
VEGFA-225ENST00000523950 SLC25A34Q6PIV7 304 aa8.19□□□□□ -1.1
VEGFA-225ENST00000523950 KIAA1109Q2LD37 5005 aa8.19□□□□□ -1.1
VEGFA-225ENST00000523950 hDV102S1A0JD36 115 aa8.18□□□□□ -1.1
VEGFA-225ENST00000523950 LINC01549A6NIU2 74 aa8.18□□□□□ -1.1
VEGFA-225ENST00000523950 CNBPP62633 177 aaKnown RBP8.18□□□□□ -1.1
VEGFA-225ENST00000523950 C2orf66Q6UXQ4 117 aa8.18□□□□□ -1.1
VEGFA-225ENST00000523950 GVQW2A0A096LPI5 108 aaPredicted RBP8.17□□□□□ -1.1
VEGFA-225ENST00000523950 IGHV1-58A0A0C4DH39 117 aa8.17□□□□□ -1.1
VEGFA-225ENST00000523950 DLEU1O43261 78 aa8.17□□□□□ -1.1
VEGFA-225ENST00000523950 C15orf56Q8N910 161 aa8.17□□□□□ -1.1
VEGFA-225ENST00000523950 C9orf163Q8N9P6 203 aa8.17□□□□□ -1.1
VEGFA-225ENST00000523950 ORAOV1Q8WV07 137 aa8.17□□□□□ -1.1
VEGFA-225ENST00000523950 RYR1P21817 5038 aa8.17□□□□□ -1.1
VEGFA-225ENST00000523950 IGLV4-3A0A075B6K6 122 aa8.16□□□□□ -1.1
VEGFA-225ENST00000523950 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.16□□□□□ -1.1
VEGFA-225ENST00000523950 TRAV13-1A0A0B4J241 112 aa8.16□□□□□ -1.1
VEGFA-225ENST00000523950 RNASE13Q5GAN3 156 aaKnown RBP8.16□□□□□ -1.1
VEGFA-225ENST00000523950 Q6ZSA8 131 aa8.16□□□□□ -1.1
VEGFA-225ENST00000523950 FAM104AQ969W3 186 aa8.16□□□□□ -1.1
VEGFA-225ENST00000523950 TMEM141Q96I45 108 aa8.16□□□□□ -1.1
VEGFA-225ENST00000523950 HERC2O95714 4834 aa8.16□□□□□ -1.1
VEGFA-225ENST00000523950 ATP5LO75964 103 aa8.15□□□□□ -1.1
VEGFA-225ENST00000523950 COX8AP10176 69 aa8.15□□□□□ -1.1
VEGFA-225ENST00000523950 XGP55808 180 aa8.15□□□□□ -1.1
VEGFA-225ENST00000523950 PAPPA-AS1Q5QFB9 102 aa8.15□□□□□ -1.1
VEGFA-225ENST00000523950 APOBP04114 4563 aaKnown RBP8.14□□□□□ -1.11
VEGFA-225ENST00000523950 IGIPA6NJ69 53 aa8.14□□□□□ -1.11
VEGFA-225ENST00000523950 COX7A2LO14548 114 aa8.14□□□□□ -1.11
VEGFA-225ENST00000523950 ATOH7Q8N100 152 aa8.14□□□□□ -1.11
VEGFA-225ENST00000523950 TOMM6Q96B49 74 aa8.14□□□□□ -1.11
VEGFA-225ENST00000523950 IFI27L1Q96BM0 104 aa8.14□□□□□ -1.11
VEGFA-225ENST00000523950 TIMM17AQ99595 171 aa8.14□□□□□ -1.11
VEGFA-225ENST00000523950 OPRPNQ99935 248 aaPredicted RBP8.14□□□□□ -1.11
VEGFA-225ENST00000523950 APOMO95445 188 aa8.13□□□□□ -1.11
VEGFA-225ENST00000523950 MALP21145 153 aa8.13□□□□□ -1.11
VEGFA-225ENST00000523950 HSPG2P98160 4391 aa8.13□□□□□ -1.11
VEGFA-225ENST00000523950 IGHV3-64A0A075B6Q5 118 aa8.12□□□□□ -1.11
VEGFA-225ENST00000523950 A0A096LNJ9 63 aa8.12□□□□□ -1.11
VEGFA-225ENST00000523950 SEC11AP67812 179 aa8.12□□□□□ -1.11
VEGFA-225ENST00000523950 BATFQ16520 125 aa8.12□□□□□ -1.11
VEGFA-225ENST00000523950 LINC01620Q4KN68 170 aa8.12□□□□□ -1.11
VEGFA-225ENST00000523950 HIGD2BQ4VC39 106 aa8.12□□□□□ -1.11
VEGFA-225ENST00000523950 LINC00173Q6ZV60 143 aa8.12□□□□□ -1.11
VEGFA-225ENST00000523950 ERASQ7Z444 233 aa8.12□□□□□ -1.11
VEGFA-225ENST00000523950 Q8N1X5 172 aa8.12□□□□□ -1.11
VEGFA-225ENST00000523950 AMELXQ99217 191 aa8.12□□□□□ -1.11
VEGFA-225ENST00000523950 VCX2Q9H322 139 aa8.12□□□□□ -1.11
VEGFA-225ENST00000523950 PKIGQ9Y2B9 76 aa8.12□□□□□ -1.11
VEGFA-225ENST00000523950 IGHV3OR16-9A0A0B4J2B5 98 aa8.11□□□□□ -1.11
VEGFA-225ENST00000523950 ZNF561-AS1K7EIQ3 104 aa8.11□□□□□ -1.11
VEGFA-225ENST00000523950 SLPIP03973 132 aa8.11□□□□□ -1.11
VEGFA-225ENST00000523950 FAM30AQ9NZY2 134 aa8.11□□□□□ -1.11
VEGFA-225ENST00000523950 DNAH8Q96JB1 4490 aa8.1□□□□□ -1.11
VEGFA-225ENST00000523950 UBE2D1P51668 147 aa8.1□□□□□ -1.11
VEGFA-225ENST00000523950 MAJINQ3KP22 176 aa8.1□□□□□ -1.11
VEGFA-225ENST00000523950 FAM19A3Q7Z5A8 133 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms