RNA–Protein interactions for RNA: ENST00000523742.1

LINC01947-201, Transcript of long intergenic non-protein coding RNA 1947, humanhuman

TSL 4 BASIC

Gene LINC01947, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01947-201ENST00000523742 RPL39LQ96EH5 51 aaKnown RBP3.49□□□□□ -1.85
LINC01947-201ENST00000523742 LINC01600Q96MT4 127 aa3.49□□□□□ -1.85
LINC01947-201ENST00000523742 KIR2DL4Q99706 377 aa3.49□□□□□ -1.85
LINC01947-201ENST00000523742 TRBV20OR9-2A0A075B6H5 130 aa3.48□□□□□ -1.85
LINC01947-201ENST00000523742 IGLV4-69A0A075B6H9 119 aa3.48□□□□□ -1.85
LINC01947-201ENST00000523742 LOC107984640A0A0U1RRK4 108 aa3.48□□□□□ -1.85
LINC01947-201ENST00000523742 FAM231BA6NCW3 169 aa3.48□□□□□ -1.85
LINC01947-201ENST00000523742 COX7A2LO14548 114 aa3.48□□□□□ -1.85
LINC01947-201ENST00000523742 PPP1R2P9O14990 202 aa3.48□□□□□ -1.85
LINC01947-201ENST00000523742 TCAPO15273 167 aa3.48□□□□□ -1.85
LINC01947-201ENST00000523742 FOXA3P55318 350 aaPredicted RBP3.48□□□□□ -1.85
LINC01947-201ENST00000523742 PRR3P79522 188 aaKnown RBP3.48□□□□□ -1.85
LINC01947-201ENST00000523742 GAGE2BQ13066 116 aa3.48□□□□□ -1.85
LINC01947-201ENST00000523742 RIGQ13278 110 aa3.48□□□□□ -1.85
LINC01947-201ENST00000523742 ODF1Q14990 250 aa3.48□□□□□ -1.85
LINC01947-201ENST00000523742 ZNF664Q8N3J9 261 aa3.48□□□□□ -1.85
LINC01947-201ENST00000523742 EIF5A2Q9GZV4 153 aaKnown RBP3.48□□□□□ -1.85
LINC01947-201ENST00000523742 TMEM191AQ9H0A3 160 aa3.48□□□□□ -1.85
LINC01947-201ENST00000523742 CDC42SE2Q9NRR3 84 aa3.48□□□□□ -1.85
LINC01947-201ENST00000523742 A0A096LNI7 61 aa3.47□□□□□ -1.85
LINC01947-201ENST00000523742 A0A0J9YXV3 536 aa3.47□□□□□ -1.85
LINC01947-201ENST00000523742 MT1HL1P0DM35 61 aa3.47□□□□□ -1.85
LINC01947-201ENST00000523742 ESDP10768 282 aa3.47□□□□□ -1.85
LINC01947-201ENST00000523742 CAMPP49913 170 aa3.47□□□□□ -1.85
LINC01947-201ENST00000523742 KRTAP5-5Q701N2 237 aaPredicted RBP3.47□□□□□ -1.85
LINC01947-201ENST00000523742 MRPL52Q86TS9 123 aaKnown RBP3.47□□□□□ -1.85
LINC01947-201ENST00000523742 C2orf48Q96LS8 159 aa3.47□□□□□ -1.85
LINC01947-201ENST00000523742 CAMK2N2Q96S95 79 aa3.47□□□□□ -1.85
LINC01947-201ENST00000523742 TMEM242Q9NWH2 141 aa3.47□□□□□ -1.85
LINC01947-201ENST00000523742 RNF213Q63HN8 5207 aa3.47□□□□□ -1.85
LINC01947-201ENST00000523742 TRBV27A0A0K0K1C4 114 aa3.46□□□□□ -1.86
LINC01947-201ENST00000523742 ZNF727A8MUV8 499 aa3.46□□□□□ -1.86
LINC01947-201ENST00000523742 HIGD1CA8MV81 97 aa3.46□□□□□ -1.86
LINC01947-201ENST00000523742 F8WDY8 70 aa3.46□□□□□ -1.86
LINC01947-201ENST00000523742 K7EN84 100 aa3.46□□□□□ -1.86
LINC01947-201ENST00000523742 MT-ND6P03923 174 aa3.46□□□□□ -1.86
LINC01947-201ENST00000523742 RAB4AP20338 218 aa3.46□□□□□ -1.86
LINC01947-201ENST00000523742 POLR2KP53803 58 aaKnown RBP3.46□□□□□ -1.86
LINC01947-201ENST00000523742 IMMP2LQ96T52 175 aa3.46□□□□□ -1.86
LINC01947-201ENST00000523742 SMIM7Q9BQ49 75 aa3.46□□□□□ -1.86
LINC01947-201ENST00000523742 OSTCQ9NRP0 149 aa3.46□□□□□ -1.86
LINC01947-201ENST00000523742 CSDC2Q9Y534 153 aaKnown RBP3.46□□□□□ -1.86
LINC01947-201ENST00000523742 TRAV13-1A0A0B4J241 112 aa3.45□□□□□ -1.86
LINC01947-201ENST00000523742 A0A1B0GW15 77 aa3.45□□□□□ -1.86
LINC01947-201ENST00000523742 LINC00862A6NCI5 91 aa3.45□□□□□ -1.86
LINC01947-201ENST00000523742 TSHBP01222 138 aa3.45□□□□□ -1.86
LINC01947-201ENST00000523742 S100A8P05109 93 aa3.45□□□□□ -1.86
LINC01947-201ENST00000523742 CKS2P33552 79 aa3.45□□□□□ -1.86
LINC01947-201ENST00000523742 SUMO2P61956 95 aaKnown RBP3.45□□□□□ -1.86
LINC01947-201ENST00000523742 RPL18AQ02543 176 aaKnown RBP3.45□□□□□ -1.86
LINC01947-201ENST00000523742 TMEM241Q24JQ0 296 aa3.45□□□□□ -1.86
LINC01947-201ENST00000523742 FAM74A3Q4VXF1 159 aa3.45□□□□□ -1.86
LINC01947-201ENST00000523742 LINC00526Q96FQ7 95 aa3.45□□□□□ -1.86
LINC01947-201ENST00000523742 NAT8BQ9UHF3 227 aa3.45□□□□□ -1.86
LINC01947-201ENST00000523742 NDUFA1O15239 70 aa3.44□□□□□ -1.86
LINC01947-201ENST00000523742 IFITM2Q01629 132 aa3.44□□□□□ -1.86
LINC01947-201ENST00000523742 SPAG11BQ08648 103 aa3.44□□□□□ -1.86
LINC01947-201ENST00000523742 SRSF9Q13242 221 aaKnown RBP eCLIP3.44□□□□□ -1.86
LINC01947-201ENST00000523742 C9orf116Q5BN46 136 aaPredicted RBP3.44□□□□□ -1.86
LINC01947-201ENST00000523742 C1orf137Q5JT78 98 aa3.44□□□□□ -1.86
LINC01947-201ENST00000523742 C5orf38Q86SI9 138 aa3.44□□□□□ -1.86
LINC01947-201ENST00000523742 LINC01551Q86U37 167 aa3.44□□□□□ -1.86
LINC01947-201ENST00000523742 AMN1Q8IY45 258 aa3.44□□□□□ -1.86
LINC01947-201ENST00000523742 NUP35Q8NFH5 326 aa3.44□□□□□ -1.86
LINC01947-201ENST00000523742 OR10D4PQ8NGN7 298 aa3.44□□□□□ -1.86
LINC01947-201ENST00000523742 DIRC1Q969H9 104 aa3.44□□□□□ -1.86
LINC01947-201ENST00000523742 C20orf78Q9BR46 151 aa3.44□□□□□ -1.86
LINC01947-201ENST00000523742 TIMM21Q9BVV7 248 aa3.44□□□□□ -1.86
LINC01947-201ENST00000523742 PSORS1C2Q9UIG4 136 aa3.44□□□□□ -1.86
LINC01947-201ENST00000523742 A0A087WZ39 114 aa3.43□□□□□ -1.86
LINC01947-201ENST00000523742 F8W036 122 aa3.43□□□□□ -1.86
LINC01947-201ENST00000523742 RAB5AP20339 215 aa3.43□□□□□ -1.86
LINC01947-201ENST00000523742 ALKAL2Q6UX46 152 aa3.43□□□□□ -1.86
LINC01947-201ENST00000523742 MRPL35Q9NZE8 188 aaKnown RBP3.43□□□□□ -1.86
LINC01947-201ENST00000523742 UBE2D4Q9Y2X8 147 aa3.43□□□□□ -1.86
LINC01947-201ENST00000523742 LPAP08519 4548 aa3.42□□□□□ -1.86
LINC01947-201ENST00000523742 TGIF2-C20orf24A0A0A6YYL0 155 aa3.42□□□□□ -1.86
LINC01947-201ENST00000523742 A0A1W2PNN7 141 aa3.42□□□□□ -1.86
LINC01947-201ENST00000523742 SMKR1H3BMG3 65 aa3.42□□□□□ -1.86
LINC01947-201ENST00000523742 PPBPP02775 128 aa3.42□□□□□ -1.86
LINC01947-201ENST00000523742 NPSP0C0P6 89 aa3.42□□□□□ -1.86
LINC01947-201ENST00000523742 IFI27P40305 119 aaPredicted RBP3.42□□□□□ -1.86
LINC01947-201ENST00000523742 RPL32P62910 135 aaKnown RBP3.42□□□□□ -1.86
LINC01947-201ENST00000523742 UBE2BP63146 152 aa3.42□□□□□ -1.86
LINC01947-201ENST00000523742 HBBP68871 147 aa3.42□□□□□ -1.86
LINC01947-201ENST00000523742 PEA15Q15121 130 aa3.42□□□□□ -1.86
LINC01947-201ENST00000523742 ADIRFQ15847 76 aa3.42□□□□□ -1.86
LINC01947-201ENST00000523742 FAM104BQ5XKR9 115 aa3.42□□□□□ -1.86
LINC01947-201ENST00000523742 ORAOV1Q8WV07 137 aa3.42□□□□□ -1.86
LINC01947-201ENST00000523742 PACRGQ96M98 296 aaPredicted RBP3.42□□□□□ -1.86
LINC01947-201ENST00000523742 SPANXA1Q9NS26 97 aa3.42□□□□□ -1.86
LINC01947-201ENST00000523742 TRBV24-1A0A075B6N3 115 aa3.41□□□□□ -1.86
LINC01947-201ENST00000523742 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.41□□□□□ -1.86
LINC01947-201ENST00000523742 SRP19P09132 144 aaKnown RBP3.41□□□□□ -1.86
LINC01947-201ENST00000523742 UBE2D1P51668 147 aa3.41□□□□□ -1.86
LINC01947-201ENST00000523742 MRPS36P82909 103 aaKnown RBP3.41□□□□□ -1.86
LINC01947-201ENST00000523742 MRPL51Q4U2R6 128 aaKnown RBP3.41□□□□□ -1.86
LINC01947-201ENST00000523742 RNASE13Q5GAN3 156 aaKnown RBP3.41□□□□□ -1.86
LINC01947-201ENST00000523742 PHF5AQ7RTV0 110 aaKnown RBP3.41□□□□□ -1.86
LINC01947-201ENST00000523742 OPRPNQ99935 248 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms