RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 WFDC9Q8NEX5 89 aa6.04□□□□□ -1.44
CSMD1-213ENST00000523488 ZFHX4Q86UP3 3567 aa6.04□□□□□ -1.44
CSMD1-213ENST00000523488 XCL1P47992 114 aa6.04□□□□□ -1.44
CSMD1-213ENST00000523488 KLKP1Q107X0 134 aa6.04□□□□□ -1.44
CSMD1-213ENST00000523488 UNQ9165/PRO28630Q6UXU0 137 aa6.04□□□□□ -1.44
CSMD1-213ENST00000523488 XCL2Q9UBD3 114 aa6.04□□□□□ -1.44
CSMD1-213ENST00000523488 IGHV1OR15-1A0A075B7D0 117 aa6.04□□□□□ -1.44
CSMD1-213ENST00000523488 SMIM26A0A096LP01 95 aa6.04□□□□□ -1.44
CSMD1-213ENST00000523488 LECT2O14960 151 aa6.04□□□□□ -1.44
CSMD1-213ENST00000523488 RNASE1P07998 156 aaKnown RBP6.04□□□□□ -1.44
CSMD1-213ENST00000523488 Q8NA96 180 aa6.04□□□□□ -1.44
CSMD1-213ENST00000523488 IGHV3-38A0A0C4DH36 116 aa6.03□□□□□ -1.44
CSMD1-213ENST00000523488 NDUFA4O00483 81 aa6.03□□□□□ -1.44
CSMD1-213ENST00000523488 SOSTDC1Q6X4U4 206 aa6.03□□□□□ -1.44
CSMD1-213ENST00000523488 ENHOQ6UWT2 76 aa6.03□□□□□ -1.44
CSMD1-213ENST00000523488 MAPK1IP1LQ8NDC0 245 aa6.03□□□□□ -1.44
CSMD1-213ENST00000523488 H0YGX0 51 aa6.03□□□□□ -1.44
CSMD1-213ENST00000523488 RPL36AP83881 106 aaKnown RBP6.03□□□□□ -1.44
CSMD1-213ENST00000523488 RPL36ALQ969Q0 106 aaKnown RBP6.03□□□□□ -1.44
CSMD1-213ENST00000523488 UBL5Q9BZL1 73 aa6.03□□□□□ -1.44
CSMD1-213ENST00000523488 TOMM7Q9P0U1 55 aa6.02□□□□□ -1.45
CSMD1-213ENST00000523488 GNLYP22749 145 aa6.02□□□□□ -1.45
CSMD1-213ENST00000523488 LMO4P61968 165 aa6.02□□□□□ -1.45
CSMD1-213ENST00000523488 SPINK13Q1W4C9 94 aa6.02□□□□□ -1.45
CSMD1-213ENST00000523488 SIRPDQ9H106 197 aa6.02□□□□□ -1.45
CSMD1-213ENST00000523488 ZFHX3Q15911 3703 aa6.02□□□□□ -1.45
CSMD1-213ENST00000523488 A0A1W2PRX2 142 aa6.02□□□□□ -1.45
CSMD1-213ENST00000523488 LINC00158P58513 81 aa6.02□□□□□ -1.45
CSMD1-213ENST00000523488 CFHR3Q02985 330 aa6.02□□□□□ -1.45
CSMD1-213ENST00000523488 K7EMT4 169 aa6.01□□□□□ -1.45
CSMD1-213ENST00000523488 C1orf158Q8N1D5 194 aa6.01□□□□□ -1.45
CSMD1-213ENST00000523488 SND1-IT1Q9HBX3 110 aa6.01□□□□□ -1.45
CSMD1-213ENST00000523488 SLPIP03973 132 aa6.01□□□□□ -1.45
CSMD1-213ENST00000523488 IL17DQ8TAD2 202 aa6.01□□□□□ -1.45
CSMD1-213ENST00000523488 KALRNO60229 2985 aa6.01□□□□□ -1.45
CSMD1-213ENST00000523488 C11orf71Q6IPW1 123 aa6.01□□□□□ -1.45
CSMD1-213ENST00000523488 FAM19A1Q7Z5A9 133 aa6.01□□□□□ -1.45
CSMD1-213ENST00000523488 ORMDL1Q9P0S3 153 aa6.01□□□□□ -1.45
CSMD1-213ENST00000523488 AKAP9Q99996 3911 aa6.01□□□□□ -1.45
CSMD1-213ENST00000523488 A0A087WYN8 130 aa6□□□□□ -1.45
CSMD1-213ENST00000523488 PROK1P58294 105 aa6□□□□□ -1.45
CSMD1-213ENST00000523488 FBXL19-AS1Q494R0 122 aa6□□□□□ -1.45
CSMD1-213ENST00000523488 PAX4O43316 350 aa6□□□□□ -1.45
CSMD1-213ENST00000523488 SNRPD3P62318 126 aaKnown RBP6□□□□□ -1.45
CSMD1-213ENST00000523488 BRD3OSQ6XYD6 125 aa6□□□□□ -1.45
CSMD1-213ENST00000523488 TMEM86BQ8N661 226 aa6□□□□□ -1.45
CSMD1-213ENST00000523488 SNURFQ9Y675 71 aa6□□□□□ -1.45
CSMD1-213ENST00000523488 H7BZZ5 65 aa6□□□□□ -1.45
CSMD1-213ENST00000523488 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.99□□□□□ -1.45
CSMD1-213ENST00000523488 AVPP01185 164 aa5.99□□□□□ -1.45
CSMD1-213ENST00000523488 EDN2P20800 178 aa5.99□□□□□ -1.45
CSMD1-213ENST00000523488 C9orf129Q5T035 196 aaKnown RBP5.99□□□□□ -1.45
CSMD1-213ENST00000523488 MIR7-3HGQ8N6C7 128 aa5.99□□□□□ -1.45
CSMD1-213ENST00000523488 SMIM11BQ8TCY0 68 aa5.99□□□□□ -1.45
CSMD1-213ENST00000523488 MOB4Q9Y3A3 225 aa5.99□□□□□ -1.45
CSMD1-213ENST00000523488 IBA57-AS1B1ANH7 110 aa5.98□□□□□ -1.45
CSMD1-213ENST00000523488 PRB1P04280 392 aa5.98□□□□□ -1.45
CSMD1-213ENST00000523488 HAMPP81172 84 aa5.98□□□□□ -1.45
CSMD1-213ENST00000523488 C5orf56Q8N8D9 126 aa5.98□□□□□ -1.45
CSMD1-213ENST00000523488 TACC2O95359 2948 aa5.98□□□□□ -1.45
CSMD1-213ENST00000523488 ERC2-IT1O76042 136 aa5.98□□□□□ -1.45
CSMD1-213ENST00000523488 CCKP06307 115 aa5.98□□□□□ -1.45
CSMD1-213ENST00000523488 COX6A2Q02221 97 aa5.98□□□□□ -1.45
CSMD1-213ENST00000523488 IGKV2-28A0A075B6P5 120 aa5.98□□□□□ -1.45
CSMD1-213ENST00000523488 IGKV2D-28P01615 120 aa5.98□□□□□ -1.45
CSMD1-213ENST00000523488 F8WEM9 126 aa5.97□□□□□ -1.45
CSMD1-213ENST00000523488 JMJD7-PLA2G4BH0Y9G9 81 aa5.97□□□□□ -1.45
CSMD1-213ENST00000523488 SAA4P35542 130 aa5.97□□□□□ -1.45
CSMD1-213ENST00000523488 FP248Q71RG6 208 aaPredicted RBP5.97□□□□□ -1.45
CSMD1-213ENST00000523488 LAMA5O15230 3695 aa5.97□□□□□ -1.45
CSMD1-213ENST00000523488 TRAV7A0A075B6U4 112 aa5.97□□□□□ -1.45
CSMD1-213ENST00000523488 IGKV3OR2-268A0A0C4DH90 116 aa5.97□□□□□ -1.45
CSMD1-213ENST00000523488 ATP5EP56381 51 aaPredicted RBP5.97□□□□□ -1.45
CSMD1-213ENST00000523488 C11orf44Q8N8P7 122 aa5.97□□□□□ -1.45
CSMD1-213ENST00000523488 MPLKIPQ8TAP9 179 aa5.97□□□□□ -1.45
CSMD1-213ENST00000523488 SMIM1B2RUZ4 78 aa5.97□□□□□ -1.45
CSMD1-213ENST00000523488 NBL1P41271 181 aa5.97□□□□□ -1.45
CSMD1-213ENST00000523488 LINC00337Q8N6G1 96 aa5.96□□□□□ -1.45
CSMD1-213ENST00000523488 BPESC1Q9GZL8 116 aa5.96□□□□□ -1.45
CSMD1-213ENST00000523488 IGLV1-40P01703 118 aa5.96□□□□□ -1.46
CSMD1-213ENST00000523488 RMI2Q96E14 147 aa5.96□□□□□ -1.46
CSMD1-213ENST00000523488 LINC00242Q5T6M2 205 aa5.96□□□□□ -1.46
CSMD1-213ENST00000523488 HECTD1Q9ULT8 2610 aa5.96□□□□□ -1.46
CSMD1-213ENST00000523488 LINC00482Q8N8I6 264 aa5.95□□□□□ -1.46
CSMD1-213ENST00000523488 USMG5Q96IX5 58 aa5.95□□□□□ -1.46
CSMD1-213ENST00000523488 LOC110117498A0A087WWA1 95 aa5.95□□□□□ -1.46
CSMD1-213ENST00000523488 TRBV7-6A0A0J9YX20 115 aa5.95□□□□□ -1.46
CSMD1-213ENST00000523488 IGHV4-38-2P0DP08 117 aa5.95□□□□□ -1.46
CSMD1-213ENST00000523488 IGHV3OR16-12A0A075B7B8 117 aa5.95□□□□□ -1.46
CSMD1-213ENST00000523488 BLCAPP62952 87 aa5.95□□□□□ -1.46
CSMD1-213ENST00000523488 CCL19Q99731 98 aa5.95□□□□□ -1.46
CSMD1-213ENST00000523488 UBE2L6O14933 153 aa5.94□□□□□ -1.46
CSMD1-213ENST00000523488 LINC00474Q9P2X8 69 aa5.94□□□□□ -1.46
CSMD1-213ENST00000523488 LCE6AA0A183 80 aa5.94□□□□□ -1.46
CSMD1-213ENST00000523488 Q9UF83 564 aa5.94□□□□□ -1.46
CSMD1-213ENST00000523488 C9orf66Q5T8R8 295 aa5.93□□□□□ -1.46
CSMD1-213ENST00000523488 C11orf68Q9H3H3 251 aaKnown RBP5.93□□□□□ -1.46
CSMD1-213ENST00000523488 LAMTOR3Q9UHA4 124 aa5.92□□□□□ -1.46
CSMD1-213ENST00000523488 TMEM89A2RUT3 159 aa5.92□□□□□ -1.46
CSMD1-213ENST00000523488 TMEM256-PLSCR3K7ERE1 68 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms