RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 C9orf129Q5T035 196 aaKnown RBP6.79□□□□□ -1.32
SDCBP-211ENST00000523441 C2orf82Q6UX34 121 aa6.79□□□□□ -1.32
SDCBP-211ENST00000523441 LINC00469Q8N7U9 141 aa6.79□□□□□ -1.32
SDCBP-211ENST00000523441 BORCS7Q96B45 105 aa6.79□□□□□ -1.32
SDCBP-211ENST00000523441 SMIM12Q96EX1 92 aa6.79□□□□□ -1.32
SDCBP-211ENST00000523441 PDE6DO43924 150 aa6.78□□□□□ -1.32
SDCBP-211ENST00000523441 TLX1NBP0CAT3 122 aa6.78□□□□□ -1.32
SDCBP-211ENST00000523441 TMEM241Q24JQ0 296 aa6.78□□□□□ -1.32
SDCBP-211ENST00000523441 LINC00173Q6ZV60 143 aa6.78□□□□□ -1.32
SDCBP-211ENST00000523441 AMN1Q8IY45 258 aa6.78□□□□□ -1.32
SDCBP-211ENST00000523441 OCC1Q8TAD7 63 aa6.78□□□□□ -1.32
SDCBP-211ENST00000523441 TRBV27A0A0K0K1C4 114 aa6.77□□□□□ -1.33
SDCBP-211ENST00000523441 KANTRA0A1W2PQU2 76 aa6.77□□□□□ -1.33
SDCBP-211ENST00000523441 VCYO14598 125 aa6.77□□□□□ -1.33
SDCBP-211ENST00000523441 RPL39P62891 51 aaKnown RBP6.77□□□□□ -1.33
SDCBP-211ENST00000523441 SRSF3P84103 164 aaKnown RBP6.77□□□□□ -1.33
SDCBP-211ENST00000523441 SMAGPQ0VAQ4 97 aa6.77□□□□□ -1.33
SDCBP-211ENST00000523441 LINC00242Q5T6M2 205 aa6.77□□□□□ -1.33
SDCBP-211ENST00000523441 IFITM10A6NMD0 228 aa6.76□□□□□ -1.33
SDCBP-211ENST00000523441 RAB4AP20338 218 aa6.76□□□□□ -1.33
SDCBP-211ENST00000523441 LINC00304Q8N9R0 145 aa6.76□□□□□ -1.33
SDCBP-211ENST00000523441 PACRGQ96M98 296 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-211ENST00000523441 KIR2DL4Q99706 377 aa6.76□□□□□ -1.33
SDCBP-211ENST00000523441 TEX46H3BTG2 121 aa6.75□□□□□ -1.33
SDCBP-211ENST00000523441 RPL28P46779 137 aaKnown RBP6.75□□□□□ -1.33
SDCBP-211ENST00000523441 CEBPGP53567 150 aa6.75□□□□□ -1.33
SDCBP-211ENST00000523441 TPRXLQ17RH7 258 aa6.75□□□□□ -1.33
SDCBP-211ENST00000523441 KRTAP13-2Q52LG2 175 aa6.75□□□□□ -1.33
SDCBP-211ENST00000523441 XAGE1AQ9HD64 81 aa6.75□□□□□ -1.33
SDCBP-211ENST00000523441 C22orf24Q9Y442 160 aa6.75□□□□□ -1.33
SDCBP-211ENST00000523441 CSDC2Q9Y534 153 aaKnown RBP6.75□□□□□ -1.33
SDCBP-211ENST00000523441 IGHV3OR16-9A0A0B4J2B5 98 aa6.74□□□□□ -1.33
SDCBP-211ENST00000523441 NDUFC2-KCTD14E9PQ53 114 aa6.74□□□□□ -1.33
SDCBP-211ENST00000523441 F8WDY8 70 aa6.74□□□□□ -1.33
SDCBP-211ENST00000523441 NUPR1O60356 82 aa6.74□□□□□ -1.33
SDCBP-211ENST00000523441 TMEM18Q96B42 140 aa6.74□□□□□ -1.33
SDCBP-211ENST00000523441 TGIF2-C20orf24A0A0A6YYL0 155 aa6.73□□□□□ -1.33
SDCBP-211ENST00000523441 RPL37AP8A6NKH3 93 aa6.73□□□□□ -1.33
SDCBP-211ENST00000523441 A8MWL6 223 aa6.73□□□□□ -1.33
SDCBP-211ENST00000523441 SUMO2P61956 95 aaKnown RBP6.73□□□□□ -1.33
SDCBP-211ENST00000523441 TMEM191AQ9H0A3 160 aa6.73□□□□□ -1.33
SDCBP-211ENST00000523441 PPDPFQ9H3Y8 114 aa6.73□□□□□ -1.33
SDCBP-211ENST00000523441 A0A1B0GUT8 65 aa6.72□□□□□ -1.33
SDCBP-211ENST00000523441 GAGE10A6NGK3 116 aa6.72□□□□□ -1.33
SDCBP-211ENST00000523441 HBBP68871 147 aa6.72□□□□□ -1.33
SDCBP-211ENST00000523441 ZNF345Q14585 488 aa6.72□□□□□ -1.33
SDCBP-211ENST00000523441 KIAA0087Q14695 138 aa6.72□□□□□ -1.33
SDCBP-211ENST00000523441 TOMM7Q9P0U1 55 aa6.72□□□□□ -1.33
SDCBP-211ENST00000523441 TRBV30A0A0K0K1B3 111 aa6.71□□□□□ -1.34
SDCBP-211ENST00000523441 HIGD1CA8MV81 97 aa6.71□□□□□ -1.34
SDCBP-211ENST00000523441 BCE1O60756 84 aa6.71□□□□□ -1.34
SDCBP-211ENST00000523441 LBHQ53QV2 105 aaPredicted RBP6.71□□□□□ -1.34
SDCBP-211ENST00000523441 NRACQ8N912 160 aa6.71□□□□□ -1.34
SDCBP-211ENST00000523441 TIMM21Q9BVV7 248 aa6.71□□□□□ -1.34
SDCBP-211ENST00000523441 IGKV2D-26A0A0A0MRZ7 120 aa6.7□□□□□ -1.34
SDCBP-211ENST00000523441 FAM104AQ969W3 186 aa6.7□□□□□ -1.34
SDCBP-211ENST00000523441 ZNF727A8MUV8 499 aa6.69□□□□□ -1.34
SDCBP-211ENST00000523441 UBE2AP49459 152 aa6.69□□□□□ -1.34
SDCBP-211ENST00000523441 MRPL55Q7Z7F7 128 aaKnown RBP6.69□□□□□ -1.34
SDCBP-211ENST00000523441 LINC00337Q8N6G1 96 aa6.69□□□□□ -1.34
SDCBP-211ENST00000523441 KRTAP4-1Q9BYQ7 146 aa6.69□□□□□ -1.34
SDCBP-211ENST00000523441 TCAPO15273 167 aa6.68□□□□□ -1.34
SDCBP-211ENST00000523441 PRSS2P07478 247 aa6.68□□□□□ -1.34
SDCBP-211ENST00000523441 CKS1BP61024 79 aa6.68□□□□□ -1.34
SDCBP-211ENST00000523441 MRPL51Q4U2R6 128 aaKnown RBP6.68□□□□□ -1.34
SDCBP-211ENST00000523441 PPP1R2P9O14990 202 aa6.67□□□□□ -1.34
SDCBP-211ENST00000523441 ZC2HC1BQ5TFG8 222 aa6.67□□□□□ -1.34
SDCBP-211ENST00000523441 SPANXA1Q9NS26 97 aa6.67□□□□□ -1.34
SDCBP-211ENST00000523441 HMSDA8MTL9 139 aa6.66□□□□□ -1.34
SDCBP-211ENST00000523441 PPP1R17O96001 155 aa6.66□□□□□ -1.34
SDCBP-211ENST00000523441 RIGQ13278 110 aa6.66□□□□□ -1.34
SDCBP-211ENST00000523441 C6orf226Q5I0X4 101 aa6.66□□□□□ -1.34
SDCBP-211ENST00000523441 FAM231DQ6ZW35 169 aa6.66□□□□□ -1.34
SDCBP-211ENST00000523441 LINC00167Q96N53 147 aa6.66□□□□□ -1.34
SDCBP-211ENST00000523441 CKS2P33552 79 aa6.65□□□□□ -1.34
SDCBP-211ENST00000523441 RPL32P62910 135 aaKnown RBP6.65□□□□□ -1.34
SDCBP-211ENST00000523441 PRLHP81277 87 aa6.64□□□□□ -1.35
SDCBP-211ENST00000523441 MRPS36P82909 103 aaKnown RBP6.64□□□□□ -1.35
SDCBP-211ENST00000523441 CT83Q5H943 113 aa6.64□□□□□ -1.35
SDCBP-211ENST00000523441 C3orf22Q8N5N4 141 aa6.64□□□□□ -1.35
SDCBP-211ENST00000523441 SCO1O75880 301 aa6.63□□□□□ -1.35
SDCBP-211ENST00000523441 TNFRSF6BO95407 300 aa6.63□□□□□ -1.35
SDCBP-211ENST00000523441 IFI27P40305 119 aaPredicted RBP6.63□□□□□ -1.35
SDCBP-211ENST00000523441 ALKBH7Q9BT30 221 aaPredicted RBP6.63□□□□□ -1.35
SDCBP-211ENST00000523441 SMIM2Q9BVW6 85 aa6.63□□□□□ -1.35
SDCBP-211ENST00000523441 IGLV4-3A0A075B6K6 122 aa6.62□□□□□ -1.35
SDCBP-211ENST00000523441 IGKV2-28A0A075B6P5 120 aa6.62□□□□□ -1.35
SDCBP-211ENST00000523441 IGKV2D-28P01615 120 aa6.62□□□□□ -1.35
SDCBP-211ENST00000523441 ASB16-AS1Q495Z4 193 aa6.62□□□□□ -1.35
SDCBP-211ENST00000523441 FAM229BQ4G0N7 80 aa6.62□□□□□ -1.35
SDCBP-211ENST00000523441 FAM104BQ5XKR9 115 aa6.62□□□□□ -1.35
SDCBP-211ENST00000523441 C20orf78Q9BR46 151 aa6.62□□□□□ -1.35
SDCBP-211ENST00000523441 D6R8Y8 96 aa6.61□□□□□ -1.35
SDCBP-211ENST00000523441 NPYP01303 97 aa6.61□□□□□ -1.35
SDCBP-211ENST00000523441 TAGLN2P37802 199 aaKnown RBP6.61□□□□□ -1.35
SDCBP-211ENST00000523441 PNRC1Q12796 327 aaPredicted RBP6.61□□□□□ -1.35
SDCBP-211ENST00000523441 Q6ZN92 141 aa6.61□□□□□ -1.35
SDCBP-211ENST00000523441 SMIM7Q9BQ49 75 aa6.61□□□□□ -1.35
SDCBP-211ENST00000523441 TP73-AS1Q9UF72 201 aa6.61□□□□□ -1.35
SDCBP-211ENST00000523441 RAB5BP61020 215 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms