RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 IGLC7A0M8Q6 106 aa-0.57□□□□□ -2.5
PCM1-217ENST00000522998 BTG2P78543 158 aa-0.57□□□□□ -2.5
PCM1-217ENST00000522998 DEFB123Q8N688 67 aa-0.57□□□□□ -2.5
PCM1-217ENST00000522998 LINC00470Q9BZP3 86 aa-0.57□□□□□ -2.5
PCM1-217ENST00000522998 NAA60Q9H7X0 242 aa-0.57□□□□□ -2.5
PCM1-217ENST00000522998 DYNLRB1Q9NP97 96 aa-0.57□□□□□ -2.5
PCM1-217ENST00000522998 PRRC2CQ9Y520 2896 aaKnown RBP-0.57□□□□□ -2.5
PCM1-217ENST00000522998 WDR7Q9Y4E6 1490 aa-0.58□□□□□ -2.5
PCM1-217ENST00000522998 BTAF1O14981 1849 aa-0.58□□□□□ -2.5
PCM1-217ENST00000522998 APOC3P02656 99 aa-0.58□□□□□ -2.5
PCM1-217ENST00000522998 COX6B1P14854 86 aa-0.58□□□□□ -2.5
PCM1-217ENST00000522998 MEIG1Q5JSS6 88 aa-0.58□□□□□ -2.5
PCM1-217ENST00000522998 SPANXDQ9BXN6 97 aa-0.58□□□□□ -2.5
PCM1-217ENST00000522998 RAPGEF6Q8TEU7 1601 aa-0.58□□□□□ -2.5
PCM1-217ENST00000522998 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.59□□□□□ -2.5
PCM1-217ENST00000522998 DOPEY1Q5JWR5 2465 aa-0.59□□□□□ -2.5
PCM1-217ENST00000522998 HYDINQ4G0P3 5121 aa-0.59□□□□□ -2.5
PCM1-217ENST00000522998 Q56UQ5 140 aa-0.59□□□□□ -2.5
PCM1-217ENST00000522998 ARL11Q969Q4 196 aa-0.59□□□□□ -2.5
PCM1-217ENST00000522998 PPP3R2Q96LZ3 170 aa-0.59□□□□□ -2.5
PCM1-217ENST00000522998 AKAP13Q12802 2813 aa-0.59□□□□□ -2.5
PCM1-217ENST00000522998 SHANK2Q9UPX8 1470 aa-0.6□□□□□ -2.5
PCM1-217ENST00000522998 CPSF1Q10570 1443 aaKnown RBP-0.6□□□□□ -2.51
PCM1-217ENST00000522998 NBPF19A0A087WUL8 3843 aa-0.6□□□□□ -2.51
PCM1-217ENST00000522998 LOC285095A0A1B0GVY8 99 aa-0.6□□□□□ -2.51
PCM1-217ENST00000522998 HMGN4O00479 90 aa-0.6□□□□□ -2.51
PCM1-217ENST00000522998 NDUFA2O43678 99 aa-0.6□□□□□ -2.51
PCM1-217ENST00000522998 FASNP49327 2511 aaKnown RBP-0.6□□□□□ -2.51
PCM1-217ENST00000522998 MYOM1P52179 1685 aa-0.6□□□□□ -2.51
PCM1-217ENST00000522998 TNRC18O15417 2968 aaPredicted RBP-0.6□□□□□ -2.51
PCM1-217ENST00000522998 KALRNO60229 2985 aa-0.6□□□□□ -2.51
PCM1-217ENST00000522998 FAT3Q8TDW7 4589 aa-0.6□□□□□ -2.51
PCM1-217ENST00000522998 RYR1P21817 5038 aa-0.61□□□□□ -2.51
PCM1-217ENST00000522998 BIRC6Q9NR09 4857 aa-0.61□□□□□ -2.51
PCM1-217ENST00000522998 GNG7O60262 68 aa-0.61□□□□□ -2.51
PCM1-217ENST00000522998 TNFP01375 233 aa-0.61□□□□□ -2.51
PCM1-217ENST00000522998 DEFB105AQ8NG35 78 aa-0.61□□□□□ -2.51
PCM1-217ENST00000522998 TSLPQ969D9 159 aa-0.61□□□□□ -2.51
PCM1-217ENST00000522998 DNAH6Q9C0G6 4158 aa-0.61□□□□□ -2.51
PCM1-217ENST00000522998 SHROOM2Q13796 1616 aa-0.61□□□□□ -2.51
PCM1-217ENST00000522998 LAMA1P25391 3075 aa-0.61□□□□□ -2.51
PCM1-217ENST00000522998 ZZEF1O43149 2961 aa-0.62□□□□□ -2.51
PCM1-217ENST00000522998 NSD3Q9BZ95 1437 aa-0.62□□□□□ -2.51
PCM1-217ENST00000522998 HMGXB3Q12766 1538 aa-0.62□□□□□ -2.51
PCM1-217ENST00000522998 MYO18BQ8IUG5 2567 aa-0.62□□□□□ -2.51
PCM1-217ENST00000522998 FAM25AB3EWG3 89 aa-0.62□□□□□ -2.51
PCM1-217ENST00000522998 FAM25CB3EWG5 89 aa-0.62□□□□□ -2.51
PCM1-217ENST00000522998 FAM25GB3EWG6 89 aa-0.62□□□□□ -2.51
PCM1-217ENST00000522998 SSSCA1O60232 199 aa-0.62□□□□□ -2.51
PCM1-217ENST00000522998 SFT2D2O95562 160 aa-0.62□□□□□ -2.51
PCM1-217ENST00000522998 FGF7P21781 194 aa-0.62□□□□□ -2.51
PCM1-217ENST00000522998 DEFB135Q30KP9 77 aa-0.62□□□□□ -2.51
PCM1-217ENST00000522998 COMMD6Q7Z4G1 85 aa-0.62□□□□□ -2.51
PCM1-217ENST00000522998 C8orf59Q8N0T1 100 aaPredicted RBP-0.62□□□□□ -2.51
PCM1-217ENST00000522998 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.62□□□□□ -2.51
PCM1-217ENST00000522998 SPRR4Q96PI1 79 aa-0.62□□□□□ -2.51
PCM1-217ENST00000522998 FMN2Q9NZ56 1722 aa-0.62□□□□□ -2.51
PCM1-217ENST00000522998 KIAA1109Q2LD37 5005 aa-0.62□□□□□ -2.51
PCM1-217ENST00000522998 GAPVD1Q14C86 1478 aa-0.62□□□□□ -2.51
PCM1-217ENST00000522998 MBD5Q9P267 1494 aa-0.62□□□□□ -2.51
PCM1-217ENST00000522998 DMXL1Q9Y485 3027 aa-0.62□□□□□ -2.51
PCM1-217ENST00000522998 SONP18583 2426 aaKnown RBP-0.63□□□□□ -2.51
PCM1-217ENST00000522998 TULP4Q9NRJ4 1543 aa-0.63□□□□□ -2.51
PCM1-217ENST00000522998 ARHGEF12Q9NZN5 1544 aa-0.63□□□□□ -2.51
PCM1-217ENST00000522998 LAMA2P24043 3122 aaKnown RBP-0.63□□□□□ -2.51
PCM1-217ENST00000522998 MUC17Q685J3 4493 aa-0.63□□□□□ -2.51
PCM1-217ENST00000522998 SPINK4O60575 86 aa-0.63□□□□□ -2.51
PCM1-217ENST00000522998 APOC2P02655 101 aa-0.63□□□□□ -2.51
PCM1-217ENST00000522998 CATR1Q13166 79 aa-0.63□□□□□ -2.51
PCM1-217ENST00000522998 DEFB112Q30KQ8 113 aa-0.63□□□□□ -2.51
PCM1-217ENST00000522998 CCDC58Q4VC31 144 aa-0.63□□□□□ -2.51
PCM1-217ENST00000522998 MRPL54Q6P161 138 aaKnown RBP-0.63□□□□□ -2.51
PCM1-217ENST00000522998 C5orf38Q86SI9 138 aa-0.63□□□□□ -2.51
PCM1-217ENST00000522998 TMEM263Q8WUH6 116 aaKnown RBP-0.63□□□□□ -2.51
PCM1-217ENST00000522998 TEP1Q99973 2627 aaKnown RBP-0.63□□□□□ -2.51
PCM1-217ENST00000522998 REV3LO60673 3130 aa-0.63□□□□□ -2.51
PCM1-217ENST00000522998 NAIPQ13075 1403 aa-0.64□□□□□ -2.51
PCM1-217ENST00000522998 KIAA0556O60303 1618 aa-0.64□□□□□ -2.51
PCM1-217ENST00000522998 NIPBLQ6KC79 2804 aaeCLIP-0.64□□□□□ -2.51
PCM1-217ENST00000522998 RYR3Q15413 4870 aa-0.64□□□□□ -2.51
PCM1-217ENST00000522998 NBASA2RRP1 2371 aa-0.64□□□□□ -2.51
PCM1-217ENST00000522998 QRICH2Q9H0J4 1663 aa-0.64□□□□□ -2.51
PCM1-217ENST00000522998 ROBO1Q9Y6N7 1651 aa-0.64□□□□□ -2.51
PCM1-217ENST00000522998 ARHGEF5Q12774 1597 aa-0.64□□□□□ -2.51
PCM1-217ENST00000522998 LOC100130705A0A1B0GUX0 176 aa-0.64□□□□□ -2.51
PCM1-217ENST00000522998 MIF4GDA9UHW6 222 aaKnown RBP-0.64□□□□□ -2.51
PCM1-217ENST00000522998 K7EP13 123 aa-0.64□□□□□ -2.51
PCM1-217ENST00000522998 MGPP08493 103 aa-0.64□□□□□ -2.51
PCM1-217ENST00000522998 LINC00474Q9P2X8 69 aa-0.64□□□□□ -2.51
PCM1-217ENST00000522998 TRANK1O15050 2925 aa-0.64□□□□□ -2.51
PCM1-217ENST00000522998 SPG11Q96JI7 2443 aa-0.64□□□□□ -2.51
PCM1-217ENST00000522998 SMG6Q86US8 1419 aaKnown RBP-0.64□□□□□ -2.51
PCM1-217ENST00000522998 VPS13DQ5THJ4 4388 aa-0.65□□□□□ -2.51
PCM1-217ENST00000522998 WDR87Q6ZQQ6 2873 aa-0.65□□□□□ -2.51
PCM1-217ENST00000522998 POLA1P09884 1462 aaPredicted RBP-0.65□□□□□ -2.51
PCM1-217ENST00000522998 PKD1P98161 4303 aa-0.65□□□□□ -2.51
PCM1-217ENST00000522998 IFNGP01579 166 aa-0.65□□□□□ -2.51
PCM1-217ENST00000522998 S100A12P80511 92 aa-0.65□□□□□ -2.51
PCM1-217ENST00000522998 SPRR2FQ96RM1 72 aa-0.65□□□□□ -2.51
PCM1-217ENST00000522998 CDC42SE2Q9NRR3 84 aa-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms