RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 ST20Q9HBF5 79 aa5.98□□□□□ -1.45
SDC2-207ENST00000522911 PLAC8Q9NZF1 115 aa5.98□□□□□ -1.45
SDC2-207ENST00000522911 HSPB8Q9UJY1 196 aa5.98□□□□□ -1.45
SDC2-207ENST00000522911 CBY1Q9Y3M2 126 aa5.98□□□□□ -1.45
SDC2-207ENST00000522911 IGHV3-64A0A075B6Q5 118 aa5.97□□□□□ -1.45
SDC2-207ENST00000522911 C19orf71A6NCJ1 209 aa5.97□□□□□ -1.45
SDC2-207ENST00000522911 F5H697 171 aa5.97□□□□□ -1.45
SDC2-207ENST00000522911 FOXA3P55318 350 aaPredicted RBP5.97□□□□□ -1.45
SDC2-207ENST00000522911 RNASEKQ6P5S7 137 aaKnown RBP5.97□□□□□ -1.45
SDC2-207ENST00000522911 SPACA4Q8TDM5 124 aa5.97□□□□□ -1.45
SDC2-207ENST00000522911 PMCHL2Q9BQD1 86 aa5.97□□□□□ -1.45
SDC2-207ENST00000522911 LAMTOR2Q9Y2Q5 125 aa5.97□□□□□ -1.45
SDC2-207ENST00000522911 F2Z2F3 143 aa5.96□□□□□ -1.46
SDC2-207ENST00000522911 SLPIP03973 132 aa5.96□□□□□ -1.46
SDC2-207ENST00000522911 G0S2P27469 103 aa5.96□□□□□ -1.46
SDC2-207ENST00000522911 RPS20P60866 119 aaKnown RBP5.96□□□□□ -1.46
SDC2-207ENST00000522911 GAGE6Q13070 117 aa5.96□□□□□ -1.46
SDC2-207ENST00000522911 PET117Q6UWS5 81 aa5.96□□□□□ -1.46
SDC2-207ENST00000522911 MAP1LC3CQ9BXW4 147 aa5.96□□□□□ -1.46
SDC2-207ENST00000522911 AP5S1Q9NUS5 200 aa5.96□□□□□ -1.46
SDC2-207ENST00000522911 A0A087WYN8 130 aa5.95□□□□□ -1.46
SDC2-207ENST00000522911 hDV102S1A0JD36 115 aa5.95□□□□□ -1.46
SDC2-207ENST00000522911 LEPROTL1O95214 131 aa5.95□□□□□ -1.46
SDC2-207ENST00000522911 CAMPP49913 170 aa5.95□□□□□ -1.46
SDC2-207ENST00000522911 CACNG7P62955 275 aa5.95□□□□□ -1.46
SDC2-207ENST00000522911 BATFQ16520 125 aa5.95□□□□□ -1.46
SDC2-207ENST00000522911 CLPSL2Q6UWE3 100 aa5.95□□□□□ -1.46
SDC2-207ENST00000522911 GATD1Q8NB37 220 aa5.95□□□□□ -1.46
SDC2-207ENST00000522911 TMEM243Q9BU79 118 aa5.95□□□□□ -1.46
SDC2-207ENST00000522911 IGLV4-60A0A075B6I1 120 aa5.94□□□□□ -1.46
SDC2-207ENST00000522911 IGLV10-54A0A075B6I4 117 aa5.94□□□□□ -1.46
SDC2-207ENST00000522911 A0A1B0GUT8 65 aa5.94□□□□□ -1.46
SDC2-207ENST00000522911 SUMO4Q6EEV6 95 aa5.94□□□□□ -1.46
SDC2-207ENST00000522911 CFAP161Q6P656 301 aa5.94□□□□□ -1.46
SDC2-207ENST00000522911 FAM19A2Q8N3H0 131 aa5.94□□□□□ -1.46
SDC2-207ENST00000522911 FER1L6-AS1Q8NA97 138 aa5.94□□□□□ -1.46
SDC2-207ENST00000522911 CNFNQ9BYD5 112 aa5.94□□□□□ -1.46
SDC2-207ENST00000522911 MUC21A0A0G2JKD1 596 aa5.93□□□□□ -1.46
SDC2-207ENST00000522911 MUC21A0A140T8X8 626 aa5.93□□□□□ -1.46
SDC2-207ENST00000522911 SYS1-DBNDD2H3BUS1 97 aa5.93□□□□□ -1.46
SDC2-207ENST00000522911 C15orf56Q8N910 161 aa5.93□□□□□ -1.46
SDC2-207ENST00000522911 C7orf33Q8WU49 177 aa5.93□□□□□ -1.46
SDC2-207ENST00000522911 LINC01600Q96MT4 127 aa5.93□□□□□ -1.46
SDC2-207ENST00000522911 H7C423 109 aa5.92□□□□□ -1.46
SDC2-207ENST00000522911 SLC25A34Q6PIV7 304 aa5.92□□□□□ -1.46
SDC2-207ENST00000522911 FA2HQ7L5A8 372 aa5.92□□□□□ -1.46
SDC2-207ENST00000522911 DPH3P1Q9H4G8 78 aa5.92□□□□□ -1.46
SDC2-207ENST00000522911 GVQW2A0A096LPI5 108 aaPredicted RBP5.91□□□□□ -1.46
SDC2-207ENST00000522911 NCR2O95944 276 aa5.91□□□□□ -1.46
SDC2-207ENST00000522911 PTTG1IPP53801 180 aa5.91□□□□□ -1.46
SDC2-207ENST00000522911 UBE2V1Q13404 147 aa5.91□□□□□ -1.46
SDC2-207ENST00000522911 COTL1Q14019 142 aa5.91□□□□□ -1.46
SDC2-207ENST00000522911 GTSF1Q8WW33 167 aa5.91□□□□□ -1.46
SDC2-207ENST00000522911 LINC00474Q9P2X8 69 aa5.91□□□□□ -1.46
SDC2-207ENST00000522911 PKIGQ9Y2B9 76 aa5.91□□□□□ -1.46
SDC2-207ENST00000522911 UBE2L6O14933 153 aa5.9□□□□□ -1.46
SDC2-207ENST00000522911 MGPP08493 103 aa5.9□□□□□ -1.46
SDC2-207ENST00000522911 CHTF8P0CG12 524 aa5.9□□□□□ -1.46
SDC2-207ENST00000522911 PRR3P79522 188 aaKnown RBP5.9□□□□□ -1.46
SDC2-207ENST00000522911 XP32Q5T750 250 aa5.9□□□□□ -1.46
SDC2-207ENST00000522911 PRSS3P2Q8NHM4 247 aa5.9□□□□□ -1.46
SDC2-207ENST00000522911 RNF213Q63HN8 5207 aa5.89□□□□□ -1.47
SDC2-207ENST00000522911 PPBPP02775 128 aa5.89□□□□□ -1.47
SDC2-207ENST00000522911 NPSP0C0P6 89 aa5.89□□□□□ -1.47
SDC2-207ENST00000522911 HINT1P49773 126 aaPredicted RBP5.89□□□□□ -1.47
SDC2-207ENST00000522911 KRTAP10-8P60410 259 aa5.89□□□□□ -1.47
SDC2-207ENST00000522911 COX6A2Q02221 97 aa5.89□□□□□ -1.47
SDC2-207ENST00000522911 LINC01545Q5VT33 79 aa5.89□□□□□ -1.47
SDC2-207ENST00000522911 LYZL1Q6UWQ5 148 aa5.89□□□□□ -1.47
SDC2-207ENST00000522911 STPG4Q8N801 248 aa5.89□□□□□ -1.47
SDC2-207ENST00000522911 DPH3Q96FX2 82 aa5.89□□□□□ -1.47
SDC2-207ENST00000522911 A0A0J9YXV3 536 aa5.88□□□□□ -1.47
SDC2-207ENST00000522911 GAGE12HA6NDE8 117 aa5.88□□□□□ -1.47
SDC2-207ENST00000522911 ATOH7Q8N100 152 aa5.88□□□□□ -1.47
SDC2-207ENST00000522911 ORMDL3Q8N138 153 aa5.88□□□□□ -1.47
SDC2-207ENST00000522911 URB1-AS1Q96HZ7 61 aa5.88□□□□□ -1.47
SDC2-207ENST00000522911 TPPP3Q9BW30 176 aa5.88□□□□□ -1.47
SDC2-207ENST00000522911 GHRHP01286 108 aa5.87□□□□□ -1.47
SDC2-207ENST00000522911 COX8AP10176 69 aa5.87□□□□□ -1.47
SDC2-207ENST00000522911 SEC11AP67812 179 aa5.87□□□□□ -1.47
SDC2-207ENST00000522911 SRSF9Q13242 221 aaKnown RBP eCLIP5.87□□□□□ -1.47
SDC2-207ENST00000522911 SPINK6Q6UWN8 80 aa5.87□□□□□ -1.47
SDC2-207ENST00000522911 CHCHD10Q8WYQ3 142 aaPredicted RBP5.87□□□□□ -1.47
SDC2-207ENST00000522911 TRBV6-5A0A0K0K1A5 114 aa5.86□□□□□ -1.47
SDC2-207ENST00000522911 FOXI1Q12951 378 aa5.86□□□□□ -1.47
SDC2-207ENST00000522911 VAMP3Q15836 100 aa5.86□□□□□ -1.47
SDC2-207ENST00000522911 MAJINQ3KP22 176 aa5.86□□□□□ -1.47
SDC2-207ENST00000522911 FAM104BQ5XKR9 115 aa5.86□□□□□ -1.47
SDC2-207ENST00000522911 REG3GQ6UW15 175 aa5.86□□□□□ -1.47
SDC2-207ENST00000522911 OR5A1Q8NGJ0 315 aa5.86□□□□□ -1.47
SDC2-207ENST00000522911 A0A096LNI7 61 aa5.85□□□□□ -1.47
SDC2-207ENST00000522911 A6NDN8 102 aa5.85□□□□□ -1.47
SDC2-207ENST00000522911 HBDP02042 147 aa5.85□□□□□ -1.47
SDC2-207ENST00000522911 FGF6P10767 208 aa5.85□□□□□ -1.47
SDC2-207ENST00000522911 BVES-AS1Q5T3Y7 98 aa5.85□□□□□ -1.47
SDC2-207ENST00000522911 SMIM15Q7Z3B0 74 aa5.85□□□□□ -1.47
SDC2-207ENST00000522911 PRELID3AQ96N28 172 aa5.85□□□□□ -1.47
SDC2-207ENST00000522911 IGHV1-58A0A0C4DH39 117 aa5.84□□□□□ -1.47
SDC2-207ENST00000522911 TMEM238LA0A1B0GVL6 79 aa5.84□□□□□ -1.47
SDC2-207ENST00000522911 SDHAF1A6NFY7 115 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms