RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 Q6ZUT4 128 aa10.55□□□□□ -0.72
PABPC1-221ENST00000522720 FA2HQ7L5A8 372 aa10.55□□□□□ -0.72
PABPC1-221ENST00000522720 CIRBP-AS1Q8TBR5 109 aa10.55□□□□□ -0.72
PABPC1-221ENST00000522720 CHCHD1Q96BP2 118 aaKnown RBP10.55□□□□□ -0.72
PABPC1-221ENST00000522720 GVQW2A0A096LPI5 108 aaPredicted RBP10.54□□□□□ -0.72
PABPC1-221ENST00000522720 S100A6P06703 90 aa10.54□□□□□ -0.72
PABPC1-221ENST00000522720 HIGD2BQ4VC39 106 aa10.54□□□□□ -0.72
PABPC1-221ENST00000522720 RNASE13Q5GAN3 156 aaKnown RBP10.54□□□□□ -0.72
PABPC1-221ENST00000522720 SPANXA1Q9NS26 97 aa10.54□□□□□ -0.72
PABPC1-221ENST00000522720 VPS13BQ7Z7G8 4022 aa10.53□□□□□ -0.72
PABPC1-221ENST00000522720 TRAV13-1A0A0B4J241 112 aa10.53□□□□□ -0.72
PABPC1-221ENST00000522720 LINC01549A6NIU2 74 aa10.53□□□□□ -0.72
PABPC1-221ENST00000522720 IFI27P40305 119 aaPredicted RBP10.53□□□□□ -0.72
PABPC1-221ENST00000522720 ORMDL2Q53FV1 153 aa10.53□□□□□ -0.72
PABPC1-221ENST00000522720 FAM104AQ969W3 186 aa10.53□□□□□ -0.72
PABPC1-221ENST00000522720 IGHV3-64A0A075B6Q5 118 aa10.52□□□□□ -0.73
PABPC1-221ENST00000522720 IGHV1-58A0A0C4DH39 117 aa10.52□□□□□ -0.73
PABPC1-221ENST00000522720 NDUFA6P56556 154 aa10.52□□□□□ -0.73
PABPC1-221ENST00000522720 MRPS36P82909 103 aaKnown RBP10.52□□□□□ -0.73
PABPC1-221ENST00000522720 LINC01546A6NGU7 62 aa10.51□□□□□ -0.73
PABPC1-221ENST00000522720 INAFM2P0DMQ5 153 aa10.51□□□□□ -0.73
PABPC1-221ENST00000522720 LINC00528Q8N1L1 170 aa10.51□□□□□ -0.73
PABPC1-221ENST00000522720 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.51□□□□□ -0.73
PABPC1-221ENST00000522720 COA6Q5JTJ3 125 aaKnown RBP10.5□□□□□ -0.73
PABPC1-221ENST00000522720 OPRPNQ99935 248 aaPredicted RBP10.5□□□□□ -0.73
PABPC1-221ENST00000522720 PYGO1Q9Y3Y4 419 aa10.5□□□□□ -0.73
PABPC1-221ENST00000522720 PANO1I0J062 215 aa10.49□□□□□ -0.73
PABPC1-221ENST00000522720 COX7A2LO14548 114 aa10.49□□□□□ -0.73
PABPC1-221ENST00000522720 HSBP1O75506 76 aa10.49□□□□□ -0.73
PABPC1-221ENST00000522720 CIRBPQ14011 172 aaKnown RBP10.49□□□□□ -0.73
PABPC1-221ENST00000522720 PLA2G1BP04054 148 aaKnown RBP10.48□□□□□ -0.73
PABPC1-221ENST00000522720 FLG2Q5D862 2391 aaPredicted RBP10.48□□□□□ -0.73
PABPC1-221ENST00000522720 SERF1AO75920 110 aa10.47□□□□□ -0.73
PABPC1-221ENST00000522720 MALP21145 153 aa10.47□□□□□ -0.73
PABPC1-221ENST00000522720 LINC00526Q96FQ7 95 aa10.47□□□□□ -0.73
PABPC1-221ENST00000522720 ZNF561-AS1K7EIQ3 104 aa10.46□□□□□ -0.73
PABPC1-221ENST00000522720 COX6A2Q02221 97 aa10.46□□□□□ -0.73
PABPC1-221ENST00000522720 C5orf38Q86SI9 138 aa10.46□□□□□ -0.73
PABPC1-221ENST00000522720 CYSLTR1Q9Y271 337 aa10.46□□□□□ -0.73
PABPC1-221ENST00000522720 IGLV4-3A0A075B6K6 122 aa10.45□□□□□ -0.74
PABPC1-221ENST00000522720 IFITM10A6NMD0 228 aa10.45□□□□□ -0.74
PABPC1-221ENST00000522720 C2orf66Q6UXQ4 117 aa10.45□□□□□ -0.74
PABPC1-221ENST00000522720 TMEM141Q96I45 108 aa10.45□□□□□ -0.74
PABPC1-221ENST00000522720 IGHV3OR16-9A0A0B4J2B5 98 aa10.44□□□□□ -0.74
PABPC1-221ENST00000522720 CHTF8P0CG12 524 aa10.44□□□□□ -0.74
PABPC1-221ENST00000522720 S100A2P29034 98 aa10.44□□□□□ -0.74
PABPC1-221ENST00000522720 DPH3Q96FX2 82 aa10.44□□□□□ -0.74
PABPC1-221ENST00000522720 URB1-AS1Q96HZ7 61 aa10.44□□□□□ -0.74
PABPC1-221ENST00000522720 IGLV4-69A0A075B6H9 119 aa10.43□□□□□ -0.74
PABPC1-221ENST00000522720 APOMO95445 188 aa10.43□□□□□ -0.74
PABPC1-221ENST00000522720 HBDP02042 147 aa10.43□□□□□ -0.74
PABPC1-221ENST00000522720 SYCNQ0VAF6 134 aa10.43□□□□□ -0.74
PABPC1-221ENST00000522720 SPACA4Q8TDM5 124 aa10.43□□□□□ -0.74
PABPC1-221ENST00000522720 CARD19Q96LW7 228 aa10.43□□□□□ -0.74
PABPC1-221ENST00000522720 PACRGQ96M98 296 aaPredicted RBP10.43□□□□□ -0.74
PABPC1-221ENST00000522720 TMA7Q9Y2S6 64 aaKnown RBP10.43□□□□□ -0.74
PABPC1-221ENST00000522720 IGIPA6NJ69 53 aa10.42□□□□□ -0.74
PABPC1-221ENST00000522720 NPSP0C0P6 89 aa10.42□□□□□ -0.74
PABPC1-221ENST00000522720 SNRPEP62304 92 aaKnown RBP10.42□□□□□ -0.74
PABPC1-221ENST00000522720 A0A087WYN8 130 aa10.41□□□□□ -0.74
PABPC1-221ENST00000522720 C5orf52A6NGY3 159 aa10.41□□□□□ -0.74
PABPC1-221ENST00000522720 KRTAP10-4P60372 401 aaPredicted RBP10.41□□□□□ -0.74
PABPC1-221ENST00000522720 PAPPA-AS1Q5QFB9 102 aa10.41□□□□□ -0.74
PABPC1-221ENST00000522720 TEX43Q6ZNM6 134 aa10.41□□□□□ -0.74
PABPC1-221ENST00000522720 TOMM6Q96B49 74 aa10.41□□□□□ -0.74
PABPC1-221ENST00000522720 VCX2Q9H322 139 aa10.41□□□□□ -0.74
PABPC1-221ENST00000522720 HSPB8Q9UJY1 196 aa10.41□□□□□ -0.74
PABPC1-221ENST00000522720 NUPR1O60356 82 aa10.4□□□□□ -0.74
PABPC1-221ENST00000522720 ATP5LO75964 103 aa10.4□□□□□ -0.74
PABPC1-221ENST00000522720 LINC00242Q5T6M2 205 aa10.4□□□□□ -0.74
PABPC1-221ENST00000522720 Q6ZN92 141 aa10.4□□□□□ -0.74
PABPC1-221ENST00000522720 ERASQ7Z444 233 aa10.4□□□□□ -0.74
PABPC1-221ENST00000522720 OR10D4PQ8NGN7 298 aa10.4□□□□□ -0.74
PABPC1-221ENST00000522720 C2orf48Q96LS8 159 aa10.4□□□□□ -0.74
PABPC1-221ENST00000522720 SCGB3A1Q96QR1 104 aa10.4□□□□□ -0.74
PABPC1-221ENST00000522720 AMELXQ99217 191 aa10.4□□□□□ -0.74
PABPC1-221ENST00000522720 PLAC8Q9NZF1 115 aa10.4□□□□□ -0.74
PABPC1-221ENST00000522720 PKIGQ9Y2B9 76 aa10.4□□□□□ -0.74
PABPC1-221ENST00000522720 IGKV2-24A0A0C4DH68 120 aa10.39□□□□□ -0.75
PABPC1-221ENST00000522720 LEPROTL1O95214 131 aa10.39□□□□□ -0.75
PABPC1-221ENST00000522720 UBE2D1P51668 147 aa10.39□□□□□ -0.75
PABPC1-221ENST00000522720 FAM19A2Q8N3H0 131 aa10.39□□□□□ -0.75
PABPC1-221ENST00000522720 CAMK2N2Q96S95 79 aa10.39□□□□□ -0.75
PABPC1-221ENST00000522720 C2orf88Q9BSF0 95 aa10.39□□□□□ -0.75
PABPC1-221ENST00000522720 A0A096LNI7 61 aa10.38□□□□□ -0.75
PABPC1-221ENST00000522720 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.38□□□□□ -0.75
PABPC1-221ENST00000522720 LINC00310P59036 64 aa10.38□□□□□ -0.75
PABPC1-221ENST00000522720 SPAG11BQ08648 103 aa10.38□□□□□ -0.75
PABPC1-221ENST00000522720 MAJINQ3KP22 176 aa10.38□□□□□ -0.75
PABPC1-221ENST00000522720 ZC2HC1BQ5TFG8 222 aa10.38□□□□□ -0.75
PABPC1-221ENST00000522720 Q6ZRU5 148 aa10.38□□□□□ -0.75
PABPC1-221ENST00000522720 LINC00173Q6ZV60 143 aa10.38□□□□□ -0.75
PABPC1-221ENST00000522720 LINC00474Q9P2X8 69 aa10.38□□□□□ -0.75
PABPC1-221ENST00000522720 MYCBP2O75592 4640 aa10.38□□□□□ -0.75
PABPC1-221ENST00000522720 DMBT1Q9UGM3 2413 aaPredicted RBP10.37□□□□□ -0.75
PABPC1-221ENST00000522720 A0A087WZ39 114 aa10.37□□□□□ -0.75
PABPC1-221ENST00000522720 RPL37AP61513 92 aaKnown RBP10.37□□□□□ -0.75
PABPC1-221ENST00000522720 HIST3H2BBQ8N257 126 aa10.37□□□□□ -0.75
PABPC1-221ENST00000522720 ORAOV1Q8WV07 137 aa10.37□□□□□ -0.75
PABPC1-221ENST00000522720 TIMM17AQ99595 171 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms