RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 SPTSSBQ8NFR3 76 aa11.91□□□□□ -0.5
USP42-207ENST00000521713 FN1P02751 2386 aaKnown RBP11.9□□□□□ -0.5
USP42-207ENST00000521713 CNFNQ9BYD5 112 aa11.9□□□□□ -0.5
USP42-207ENST00000521713 LINC00467Q9BRT7 94 aa11.9□□□□□ -0.5
USP42-207ENST00000521713 OXLD1Q5BKU9 147 aa11.9□□□□□ -0.5
USP42-207ENST00000521713 PIK3CD-AS1Q5SR53 167 aa11.9□□□□□ -0.5
USP42-207ENST00000521713 WFDC10AQ9H1F0 79 aa11.89□□□□□ -0.51
USP42-207ENST00000521713 LINC00526Q96FQ7 95 aa11.89□□□□□ -0.51
USP42-207ENST00000521713 A0A0U1RQV1 116 aa11.88□□□□□ -0.51
USP42-207ENST00000521713 IGHV4-30-4P0DP06 118 aa11.87□□□□□ -0.51
USP42-207ENST00000521713 C1orf195Q5TG92 126 aa11.87□□□□□ -0.51
USP42-207ENST00000521713 IGLV1-51P01701 117 aa11.86□□□□□ -0.51
USP42-207ENST00000521713 C4orf48Q5BLP8 95 aa11.86□□□□□ -0.51
USP42-207ENST00000521713 FAM19A3Q7Z5A8 133 aa11.86□□□□□ -0.51
USP42-207ENST00000521713 HCFC1P51610 2035 aa11.86□□□□□ -0.51
USP42-207ENST00000521713 M0QXV9 152 aa11.86□□□□□ -0.51
USP42-207ENST00000521713 LINC00694P0DN24 101 aa11.86□□□□□ -0.51
USP42-207ENST00000521713 KPRPQ5T749 579 aaPredicted RBP11.86□□□□□ -0.51
USP42-207ENST00000521713 IGKV2-24A0A0C4DH68 120 aa11.85□□□□□ -0.51
USP42-207ENST00000521713 RNASE3P12724 160 aaKnown RBP11.85□□□□□ -0.51
USP42-207ENST00000521713 UBE2D1P51668 147 aa11.85□□□□□ -0.51
USP42-207ENST00000521713 SERP1Q9Y6X1 66 aa11.85□□□□□ -0.51
USP42-207ENST00000521713 ODF3L2Q3SX64 289 aa11.85□□□□□ -0.51
USP42-207ENST00000521713 SETD2Q9BYW2 2564 aaPredicted RBP11.85□□□□□ -0.51
USP42-207ENST00000521713 SEC61GP60059 68 aa11.84□□□□□ -0.51
USP42-207ENST00000521713 MRGPRG-AS1Q2M3A8 158 aa11.84□□□□□ -0.51
USP42-207ENST00000521713 C9orf85Q96MD7 179 aa11.84□□□□□ -0.51
USP42-207ENST00000521713 POLR2KP53803 58 aaKnown RBP11.83□□□□□ -0.52
USP42-207ENST00000521713 UBE2D3P61077 147 aa11.83□□□□□ -0.52
USP42-207ENST00000521713 UBE2D2P62837 147 aa11.83□□□□□ -0.52
USP42-207ENST00000521713 URB1-AS1Q96HZ7 61 aa11.83□□□□□ -0.52
USP42-207ENST00000521713 LELP1Q5T871 98 aa11.83□□□□□ -0.52
USP42-207ENST00000521713 CENPFP49454 3210 aa11.83□□□□□ -0.52
USP42-207ENST00000521713 PRR9Q5T870 116 aa11.82□□□□□ -0.52
USP42-207ENST00000521713 B9D2Q9BPU9 175 aa11.82□□□□□ -0.52
USP42-207ENST00000521713 SLPIP03973 132 aa11.81□□□□□ -0.52
USP42-207ENST00000521713 PROK1P58294 105 aa11.81□□□□□ -0.52
USP42-207ENST00000521713 TSHBP01222 138 aa11.81□□□□□ -0.52
USP42-207ENST00000521713 MUC7Q8TAX7 377 aa11.81□□□□□ -0.52
USP42-207ENST00000521713 C11orf21Q9P2W6 132 aa11.8□□□□□ -0.52
USP42-207ENST00000521713 TRAV7A0A075B6U4 112 aa11.8□□□□□ -0.52
USP42-207ENST00000521713 H0Y9J4 135 aa11.8□□□□□ -0.52
USP42-207ENST00000521713 TANC2Q9HCD6 1990 aa11.8□□□□□ -0.52
USP42-207ENST00000521713 EPG5Q9HCE0 2579 aa11.79□□□□□ -0.52
USP42-207ENST00000521713 SYCNQ0VAF6 134 aa11.79□□□□□ -0.52
USP42-207ENST00000521713 C6orf99Q4VX62 202 aa11.78□□□□□ -0.52
USP42-207ENST00000521713 CD164L2Q6UWJ8 174 aa11.77□□□□□ -0.53
USP42-207ENST00000521713 PRR15LQ9BU68 103 aa11.77□□□□□ -0.53
USP42-207ENST00000521713 A0A0J9YWU9 116 aa11.76□□□□□ -0.53
USP42-207ENST00000521713 CCKP06307 115 aa11.76□□□□□ -0.53
USP42-207ENST00000521713 IGIPA6NJ69 53 aa11.76□□□□□ -0.53
USP42-207ENST00000521713 SCXQ7RTU7 201 aa11.76□□□□□ -0.53
USP42-207ENST00000521713 ATG2AQ2TAZ0 1938 aa11.76□□□□□ -0.53
USP42-207ENST00000521713 SNURFQ9Y675 71 aa11.76□□□□□ -0.53
USP42-207ENST00000521713 PKD1L2Q7Z442 2459 aa11.75□□□□□ -0.53
USP42-207ENST00000521713 HRCT1Q6UXD1 115 aa11.75□□□□□ -0.53
USP42-207ENST00000521713 MTORP42345 2549 aa11.75□□□□□ -0.53
USP42-207ENST00000521713 ADAMTS20P59510 1910 aa11.75□□□□□ -0.53
USP42-207ENST00000521713 UBE2D4Q9Y2X8 147 aa11.75□□□□□ -0.53
USP42-207ENST00000521713 IGKV4-1P06312 121 aa11.74□□□□□ -0.53
USP42-207ENST00000521713 NANOS2P60321 138 aaKnown RBP11.74□□□□□ -0.53
USP42-207ENST00000521713 COL4A2P08572 1712 aa11.74□□□□□ -0.53
USP42-207ENST00000521713 EML5Q05BV3 1969 aa11.74□□□□□ -0.53
USP42-207ENST00000521713 SMIM11BQ8TCY0 68 aa11.74□□□□□ -0.53
USP42-207ENST00000521713 HIGD2AQ9BW72 106 aa11.74□□□□□ -0.53
USP42-207ENST00000521713 IGLV2-18A0A075B6J9 118 aa11.73□□□□□ -0.53
USP42-207ENST00000521713 RAI1Q7Z5J4 1906 aaPredicted RBP11.73□□□□□ -0.53
USP42-207ENST00000521713 NUPR2A6NF83 97 aa11.72□□□□□ -0.53
USP42-207ENST00000521713 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.72□□□□□ -0.53
USP42-207ENST00000521713 EDN2P20800 178 aa11.72□□□□□ -0.53
USP42-207ENST00000521713 COX17Q14061 63 aa11.72□□□□□ -0.53
USP42-207ENST00000521713 A0A087WZ39 114 aa11.72□□□□□ -0.53
USP42-207ENST00000521713 COX8CQ7Z4L0 72 aa11.72□□□□□ -0.53
USP42-207ENST00000521713 LOC100131303A0A0U1RQF7 123 aa11.72□□□□□ -0.53
USP42-207ENST00000521713 CPAMD8Q8IZJ3 1885 aa11.72□□□□□ -0.53
USP42-207ENST00000521713 PRM2P04554 102 aa11.71□□□□□ -0.53
USP42-207ENST00000521713 FAM19A5Q7Z5A7 132 aaPredicted RBP11.71□□□□□ -0.53
USP42-207ENST00000521713 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.71□□□□□ -0.53
USP42-207ENST00000521713 CHCHD7Q9BUK0 85 aa11.71□□□□□ -0.54
USP42-207ENST00000521713 LY6G6CO95867 125 aa11.7□□□□□ -0.54
USP42-207ENST00000521713 Q6ZQY7 126 aa11.7□□□□□ -0.54
USP42-207ENST00000521713 C7orf33Q8WU49 177 aa11.7□□□□□ -0.54
USP42-207ENST00000521713 A6NED7 52 aa11.7□□□□□ -0.54
USP42-207ENST00000521713 RPL28P46779 137 aaKnown RBP11.7□□□□□ -0.54
USP42-207ENST00000521713 LINC00959A0A1B0GUT2 108 aa11.69□□□□□ -0.54
USP42-207ENST00000521713 Q8N2B8 174 aa11.68□□□□□ -0.54
USP42-207ENST00000521713 IGLV4-69A0A075B6H9 119 aa11.68□□□□□ -0.54
USP42-207ENST00000521713 FAM19A1Q7Z5A9 133 aa11.68□□□□□ -0.54
USP42-207ENST00000521713 XAGE1AQ9HD64 81 aa11.68□□□□□ -0.54
USP42-207ENST00000521713 DHRS4-AS1Q9P1J3 65 aa11.68□□□□□ -0.54
USP42-207ENST00000521713 A8MZ25 164 aa11.67□□□□□ -0.54
USP42-207ENST00000521713 POM121L12Q8N7R1 296 aa11.67□□□□□ -0.54
USP42-207ENST00000521713 TRBV7-7A0A0K0K1E9 115 aa11.67□□□□□ -0.54
USP42-207ENST00000521713 GAS8-AS1O95177 125 aa11.67□□□□□ -0.54
USP42-207ENST00000521713 EXPH5Q8NEV8 1989 aa11.67□□□□□ -0.54
USP42-207ENST00000521713 K7ERS5 55 aa11.67□□□□□ -0.54
USP42-207ENST00000521713 M0R2N4 97 aa11.67□□□□□ -0.54
USP42-207ENST00000521713 C1orf158Q8N1D5 194 aa11.67□□□□□ -0.54
USP42-207ENST00000521713 NTM-AS1Q6ZSK4 140 aa11.66□□□□□ -0.54
USP42-207ENST00000521713 CSDC2Q9Y534 153 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms