RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 IFI27L1Q96BM0 104 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 PRELID3AQ96N28 172 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 DYNLRB1Q9NP97 96 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 HIGD1BQ9P298 99 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 RABAC1Q9UI14 185 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 KLK9Q9UKQ9 250 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 CSPG4Q6UVK1 2322 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 SORL1Q92673 2214 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 TRBV7-3A0A075B6L6 115 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 IGKV2D-26A0A0A0MRZ7 120 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 A0A1W2PPM0 123 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 TMEM189A5PLL7 270 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 RBAKDNA6NC62 111 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 C11orf86A6NJI1 115 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 OOSP1A8MZH6 123 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 M0R1W7 72 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 SMIM17P0DL12 118 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 RPL7P18124 248 aaKnown RBP1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 EVI2AP22794 236 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 ZNF80P51504 273 aaPredicted RBP1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 FXYD2P54710 66 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 PRB3Q04118 309 aaPredicted RBP1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 KLRD1Q13241 179 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 PLGLAQ15195 96 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 LYZL1Q6UWQ5 148 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 GTF2H5Q6ZYL4 71 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 SMIM15Q7Z3B0 74 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 TTC9CQ8N5M4 171 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 DEFB123Q8N688 67 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 Q8NDZ9 215 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 OR11H6Q8NGC7 330 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 Q9BRP9 147 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 HILPDAQ9Y5L2 63 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 AKAP13Q12802 2813 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 BSNQ9UPA5 3926 aa1.46□□□□□ -2.18
HMGN1P28-201ENST00000521340 DSPP15924 2871 aaKnown RBP1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 DMDP11532 3685 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 ANKRD17O75179 2603 aaKnown RBP1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 PRRC2CQ9Y520 2896 aaKnown RBP1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 TRBV25-1A0A075B6N4 114 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 TMSB15BA0A087X1C1 80 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 TRAV12-1A0A0B4J245 112 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 CLPSL1A2RUU4 121 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 SMIM9A6NGZ8 99 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 KNCNA6PVL3 124 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 TMEM238C9JI98 176 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 H3BUT2 72 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 K7ERJ3 54 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 GNG7O60262 68 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 DPM2O94777 84 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 IGKCP01834 107 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 PRB4P10163 310 aaPredicted RBP1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 HLA-DMBP28068 263 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 FCER1GP30273 86 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 PSMG4Q5JS54 123 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 MINOS1Q5TGZ0 78 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 FOXI2Q6ZQN5 318 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 VMO1Q7Z5L0 202 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 S100A7AQ86SG5 101 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 DYNAPQ8N1N2 210 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 Q8N8P6 123 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 NAA38Q9BRA0 125 aaKnown RBP1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 VPS25Q9BRG1 176 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 SLC50A1Q9BRV3 221 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 SMIM2Q9BVW6 85 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 NXT2Q9NPJ8 142 aaKnown RBP1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 SMPXQ9UHP9 88 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 HHLA3Q9XRX5 114 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 TIMM8BQ9Y5J9 83 aaPredicted RBP1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 SPCS1Q9Y6A9 102 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 WDFY4Q6ZS81 3184 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 CFAP54Q96N23 3096 aa1.45□□□□□ -2.18
HMGN1P28-201ENST00000521340 ZFHX4Q86UP3 3567 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 WNK1Q9H4A3 2382 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 LOC400499M0QZD8 3231 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 CEP295Q9C0D2 2601 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 CELSR3Q9NYQ7 3312 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 A0A087WX48 190 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 F8VRH5 84 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 LYNX1G3V0Z9 82 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 H3BVH4 76 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 K7EMI3 77 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 CNIH1O95406 144 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 LYNX1P0DP58 116 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 SCGB1A1P11684 91 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 FABP2P12104 132 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 COX6B1P14854 86 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 PLNP26678 52 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 S100A7P31151 101 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 CKS2P33552 79 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 EFNA4P52798 201 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 TCTAP57738 103 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 FXYD7P58549 80 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 RRN3P1Q2M238 152 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 ATP6V0E2Q8NHE4 81 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 SPACA4Q8TDM5 124 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 AP1S3Q96PC3 154 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 AGPAT4-IT1Q9H0P7 198 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 NHP2Q9NX24 153 aaKnown RBP1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms