RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 SVBPQ8N300 66 aa13.17□□□□□ -0.3
TRIM35-203ENST00000521253 PRSS3P2Q8NHM4 247 aa13.17□□□□□ -0.3
TRIM35-203ENST00000521253 TMEM141Q96I45 108 aa13.17□□□□□ -0.3
TRIM35-203ENST00000521253 ALKBH7Q9BT30 221 aaPredicted RBP13.17□□□□□ -0.3
TRIM35-203ENST00000521253 IGHV3OR16-9A0A0B4J2B5 98 aa13.16□□□□□ -0.3
TRIM35-203ENST00000521253 SPACA4Q8TDM5 124 aa13.16□□□□□ -0.3
TRIM35-203ENST00000521253 CARD19Q96LW7 228 aa13.16□□□□□ -0.3
TRIM35-203ENST00000521253 MRPL18Q9H0U6 180 aaKnown RBP13.16□□□□□ -0.3
TRIM35-203ENST00000521253 IGLV4-69A0A075B6H9 119 aa13.15□□□□□ -0.3
TRIM35-203ENST00000521253 TGIF2-C20orf24A0A0A6YYL0 155 aa13.15□□□□□ -0.3
TRIM35-203ENST00000521253 SNAPINO95295 136 aa13.15□□□□□ -0.3
TRIM35-203ENST00000521253 SYCNQ0VAF6 134 aa13.15□□□□□ -0.3
TRIM35-203ENST00000521253 FABP9Q0Z7S8 132 aa13.15□□□□□ -0.3
TRIM35-203ENST00000521253 IGIPA6NJ69 53 aa13.14□□□□□ -0.31
TRIM35-203ENST00000521253 APOMO95445 188 aa13.14□□□□□ -0.31
TRIM35-203ENST00000521253 TEX43Q6ZNM6 134 aa13.14□□□□□ -0.31
TRIM35-203ENST00000521253 DPH3Q96FX2 82 aa13.14□□□□□ -0.31
TRIM35-203ENST00000521253 FLG2Q5D862 2391 aaPredicted RBP13.13□□□□□ -0.31
TRIM35-203ENST00000521253 LINC00242Q5T6M2 205 aa13.13□□□□□ -0.31
TRIM35-203ENST00000521253 ZC2HC1BQ5TFG8 222 aa13.13□□□□□ -0.31
TRIM35-203ENST00000521253 Q6ZN92 141 aa13.13□□□□□ -0.31
TRIM35-203ENST00000521253 LINC00173Q6ZV60 143 aa13.13□□□□□ -0.31
TRIM35-203ENST00000521253 A0A087WYN8 130 aa13.12□□□□□ -0.31
TRIM35-203ENST00000521253 IGKV2-24A0A0C4DH68 120 aa13.12□□□□□ -0.31
TRIM35-203ENST00000521253 SPAG11BQ08648 103 aa13.12□□□□□ -0.31
TRIM35-203ENST00000521253 AMELXQ99217 191 aa13.12□□□□□ -0.31
TRIM35-203ENST00000521253 NPSP0C0P6 89 aa13.11□□□□□ -0.31
TRIM35-203ENST00000521253 G0S2P27469 103 aa13.11□□□□□ -0.31
TRIM35-203ENST00000521253 UBE2D1P51668 147 aa13.11□□□□□ -0.31
TRIM35-203ENST00000521253 KRTAP10-4P60372 401 aaPredicted RBP13.11□□□□□ -0.31
TRIM35-203ENST00000521253 Q6ZRU5 148 aa13.11□□□□□ -0.31
TRIM35-203ENST00000521253 OR10D4PQ8NGN7 298 aa13.11□□□□□ -0.31
TRIM35-203ENST00000521253 TOMM6Q96B49 74 aa13.11□□□□□ -0.31
TRIM35-203ENST00000521253 C2orf48Q96LS8 159 aa13.11□□□□□ -0.31
TRIM35-203ENST00000521253 CAMK2N2Q96S95 79 aa13.11□□□□□ -0.31
TRIM35-203ENST00000521253 C2orf88Q9BSF0 95 aa13.11□□□□□ -0.31
TRIM35-203ENST00000521253 VCX2Q9H322 139 aa13.11□□□□□ -0.31
TRIM35-203ENST00000521253 A0A096LNI7 61 aa13.1□□□□□ -0.31
TRIM35-203ENST00000521253 LINC01546A6NGU7 62 aa13.1□□□□□ -0.31
TRIM35-203ENST00000521253 ORAOV1Q8WV07 137 aa13.1□□□□□ -0.31
TRIM35-203ENST00000521253 MAJINQ3KP22 176 aa13.09□□□□□ -0.31
TRIM35-203ENST00000521253 TIMM17AQ99595 171 aa13.09□□□□□ -0.31
TRIM35-203ENST00000521253 TRAPPC1Q9Y5R8 145 aa13.09□□□□□ -0.31
TRIM35-203ENST00000521253 A0A087WZ39 114 aa13.08□□□□□ -0.32
TRIM35-203ENST00000521253 PLAC8Q9NZF1 115 aa13.08□□□□□ -0.32
TRIM35-203ENST00000521253 PKIGQ9Y2B9 76 aa13.08□□□□□ -0.32
TRIM35-203ENST00000521253 RPL37AP61513 92 aaKnown RBP13.06□□□□□ -0.32
TRIM35-203ENST00000521253 PAPPA-AS1Q5QFB9 102 aa13.06□□□□□ -0.32
TRIM35-203ENST00000521253 FA2HQ7L5A8 372 aa13.06□□□□□ -0.32
TRIM35-203ENST00000521253 ERASQ7Z444 233 aa13.06□□□□□ -0.32
TRIM35-203ENST00000521253 SCGB3A1Q96QR1 104 aa13.06□□□□□ -0.32
TRIM35-203ENST00000521253 STPG4Q8N801 248 aa13.04□□□□□ -0.32
TRIM35-203ENST00000521253 YPEL4Q96NS1 127 aa13.04□□□□□ -0.32
TRIM35-203ENST00000521253 SMCO4Q9NRQ5 59 aa13.04□□□□□ -0.32
TRIM35-203ENST00000521253 LINC00474Q9P2X8 69 aa13.04□□□□□ -0.32
TRIM35-203ENST00000521253 LOC107984640A0A0U1RRK4 108 aa13.03□□□□□ -0.32
TRIM35-203ENST00000521253 FAM19A3Q7Z5A8 133 aa13.03□□□□□ -0.32
TRIM35-203ENST00000521253 A0A0J9YXV3 536 aa13.02□□□□□ -0.33
TRIM35-203ENST00000521253 F8WDY8 70 aa13.02□□□□□ -0.33
TRIM35-203ENST00000521253 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.02□□□□□ -0.33
TRIM35-203ENST00000521253 PTTG1IPP53801 180 aa13.02□□□□□ -0.33
TRIM35-203ENST00000521253 KIAA0087Q14695 138 aa13.02□□□□□ -0.33
TRIM35-203ENST00000521253 SLC7A5P1Q8MH63 180 aa13.02□□□□□ -0.33
TRIM35-203ENST00000521253 LINC01561Q8N1V8 128 aa13.02□□□□□ -0.33
TRIM35-203ENST00000521253 C18orf32Q8TCD1 76 aa13.02□□□□□ -0.33
TRIM35-203ENST00000521253 MRPL35Q9NZE8 188 aaKnown RBP13.02□□□□□ -0.33
TRIM35-203ENST00000521253 DMBT1Q9UGM3 2413 aaPredicted RBP13.02□□□□□ -0.33
TRIM35-203ENST00000521253 LINC01549A6NIU2 74 aa13.01□□□□□ -0.33
TRIM35-203ENST00000521253 NDUFA1O15239 70 aa13.01□□□□□ -0.33
TRIM35-203ENST00000521253 GAGE2BQ13066 116 aa13.01□□□□□ -0.33
TRIM35-203ENST00000521253 RNF151Q2KHN1 245 aa13.01□□□□□ -0.33
TRIM35-203ENST00000521253 C10orf25Q5T742 122 aa13.01□□□□□ -0.33
TRIM35-203ENST00000521253 HERC1Q15751 4861 aa13.01□□□□□ -0.33
TRIM35-203ENST00000521253 URB1-AS1Q96HZ7 61 aa13□□□□□ -0.33
TRIM35-203ENST00000521253 PKHD1L1Q86WI1 4243 aa12.99□□□□□ -0.33
TRIM35-203ENST00000521253 HERVK_113P63121 156 aa12.99□□□□□ -0.33
TRIM35-203ENST00000521253 SEC11AP67812 179 aa12.99□□□□□ -0.33
TRIM35-203ENST00000521253 UNQ6190/PRO20217Q6UXQ8 127 aa12.99□□□□□ -0.33
TRIM35-203ENST00000521253 RPL18AQ02543 176 aaKnown RBP12.98□□□□□ -0.33
TRIM35-203ENST00000521253 CBLN2Q8IUK8 224 aa12.98□□□□□ -0.33
TRIM35-203ENST00000521253 CDKN2A-AS1Q9UH64 79 aa12.98□□□□□ -0.33
TRIM35-203ENST00000521253 A0A096LNJ9 63 aa12.97□□□□□ -0.33
TRIM35-203ENST00000521253 LINC00614P0C842 121 aa12.97□□□□□ -0.33
TRIM35-203ENST00000521253 C7orf33Q8WU49 177 aa12.97□□□□□ -0.33
TRIM35-203ENST00000521253 GEMIN7Q9H840 131 aaKnown RBP12.97□□□□□ -0.33
TRIM35-203ENST00000521253 C6orf48Q9UBA6 75 aa12.97□□□□□ -0.33
TRIM35-203ENST00000521253 LRP1Q07954 4544 aaKnown RBP12.96□□□□□ -0.33
TRIM35-203ENST00000521253 HNRNPA3P51991 378 aaKnown RBP12.96□□□□□ -0.33
TRIM35-203ENST00000521253 C2orf82Q6UX34 121 aa12.96□□□□□ -0.33
TRIM35-203ENST00000521253 CST9LQ9H4G1 147 aa12.96□□□□□ -0.33
TRIM35-203ENST00000521253 FAT3Q8TDW7 4589 aa12.94□□□□□ -0.34
TRIM35-203ENST00000521253 TINCRA0A1B0GVN0 87 aa12.93□□□□□ -0.34
TRIM35-203ENST00000521253 A0A1W2PNN7 141 aa12.93□□□□□ -0.34
TRIM35-203ENST00000521253 RAB5BP61020 215 aa12.93□□□□□ -0.34
TRIM35-203ENST00000521253 PMVKQ15126 192 aa12.93□□□□□ -0.34
TRIM35-203ENST00000521253 PMCHL1Q16048 86 aa12.93□□□□□ -0.34
TRIM35-203ENST00000521253 LINC00469Q8N7U9 141 aa12.93□□□□□ -0.34
TRIM35-203ENST00000521253 PACRGQ96M98 296 aaPredicted RBP12.93□□□□□ -0.34
TRIM35-203ENST00000521253 TOMM7Q9P0U1 55 aa12.93□□□□□ -0.34
TRIM35-203ENST00000521253 HBDP02042 147 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms