RNA–Protein interactions for RNA: ENST00000520898.5

UBR5-208, Transcript of ubiquitin protein ligase E3 component n-recognin 5, human

TSL 3

Gene UBR5, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR5-208	ENST00000520898	IFITM3	Q01628	133 aa		3.05	□□□□□ -1.92
UBR5-208	ENST00000520898	SYCN	Q0VAF6	134 aa		3.05	□□□□□ -1.92
UBR5-208	ENST00000520898	COTL1	Q14019	142 aa		3.05	□□□□□ -1.92
UBR5-208	ENST00000520898	C9orf116	Q5BN46	136 aa	Predicted RBP	3.05	□□□□□ -1.92
UBR5-208	ENST00000520898	PHF5A	Q7RTV0	110 aa	Known RBP	3.05	□□□□□ -1.92
UBR5-208	ENST00000520898	KRTAP11-1	Q8IUC1	163 aa		3.05	□□□□□ -1.92
UBR5-208	ENST00000520898	LINC00959	A0A1B0GUT2	108 aa		3.04	□□□□□ -1.92
UBR5-208	ENST00000520898	FAM168B	A1KXE4	195 aa		3.04	□□□□□ -1.92
UBR5-208	ENST00000520898	MAP1LC3B2	A6NCE7	125 aa		3.04	□□□□□ -1.92
UBR5-208	ENST00000520898	CCL25	O15444	150 aa		3.04	□□□□□ -1.92
UBR5-208	ENST00000520898	UPK1B	O75841	260 aa		3.04	□□□□□ -1.92
UBR5-208	ENST00000520898	BCL2	P10415	239 aa		3.04	□□□□□ -1.92
UBR5-208	ENST00000520898	FGF6	P10767	208 aa		3.04	□□□□□ -1.92
UBR5-208	ENST00000520898	XCL1	P47992	114 aa		3.04	□□□□□ -1.92
UBR5-208	ENST00000520898	RPL7L1	Q6DKI1	246 aa	Known RBP	3.04	□□□□□ -1.92
UBR5-208	ENST00000520898	LINC00299	Q6ZSB3	139 aa		3.04	□□□□□ -1.92
UBR5-208	ENST00000520898	BAGE2	Q86Y30	109 aa		3.04	□□□□□ -1.92
UBR5-208	ENST00000520898	NUP35	Q8NFH5	326 aa		3.04	□□□□□ -1.92
UBR5-208	ENST00000520898	OR5A1	Q8NGJ0	315 aa		3.04	□□□□□ -1.92
UBR5-208	ENST00000520898	STOML3	Q8TAV4	291 aa		3.04	□□□□□ -1.92
UBR5-208	ENST00000520898	MAP1LC3B	Q9GZQ8	125 aa		3.04	□□□□□ -1.92
UBR5-208	ENST00000520898	CRCT1	Q9UGL9	99 aa		3.04	□□□□□ -1.92
UBR5-208	ENST00000520898	CSDC2	Q9Y534	153 aa	Known RBP	3.04	□□□□□ -1.92
UBR5-208	ENST00000520898	IGLV4-69	A0A075B6H9	119 aa		3.03	□□□□□ -1.92
UBR5-208	ENST00000520898	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	3.03	□□□□□ -1.92
UBR5-208	ENST00000520898	IGKV2-29	A2NJV5	120 aa	Predicted RBP	3.03	□□□□□ -1.92
UBR5-208	ENST00000520898	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	3.03	□□□□□ -1.92
UBR5-208	ENST00000520898	APOM	O95445	188 aa		3.03	□□□□□ -1.92
UBR5-208	ENST00000520898	NCR2	O95944	276 aa		3.03	□□□□□ -1.92
UBR5-208	ENST00000520898	ZNF25	P17030	456 aa	Predicted RBP	3.03	□□□□□ -1.92
UBR5-208	ENST00000520898	DSCR10	P59022	87 aa		3.03	□□□□□ -1.92
UBR5-208	ENST00000520898	MEF2B	Q02080	365 aa	Predicted RBP	3.03	□□□□□ -1.92
UBR5-208	ENST00000520898	AMMECR1L	Q6DCA0	310 aa		3.03	□□□□□ -1.92
UBR5-208	ENST00000520898	HIST1H4G	Q99525	98 aa		3.03	□□□□□ -1.92
UBR5-208	ENST00000520898	CARHSP1	Q9Y2V2	147 aa	Known RBP	3.03	□□□□□ -1.92
UBR5-208	ENST00000520898	BORCS7-ASMT	A0A0B4J1R7	106 aa		3.02	□□□□□ -1.93
UBR5-208	ENST00000520898	TRAV1-1	A0A0B4J248	108 aa		3.02	□□□□□ -1.93
UBR5-208	ENST00000520898	C19orf71	A6NCJ1	209 aa		3.02	□□□□□ -1.93
UBR5-208	ENST00000520898		F2Z2F3	143 aa		3.02	□□□□□ -1.93
UBR5-208	ENST00000520898	SNAPIN	O95295	136 aa		3.02	□□□□□ -1.93
UBR5-208	ENST00000520898	TRGC1	P0CF51	173 aa		3.02	□□□□□ -1.93
UBR5-208	ENST00000520898	RPS20	P60866	119 aa	Known RBP	3.02	□□□□□ -1.93
UBR5-208	ENST00000520898		Q5BKY6	102 aa		3.02	□□□□□ -1.93
UBR5-208	ENST00000520898	AKR1C8P	Q5T2L2	129 aa		3.02	□□□□□ -1.93
UBR5-208	ENST00000520898		Q6ZN92	141 aa		3.02	□□□□□ -1.93
UBR5-208	ENST00000520898	GATD1	Q8NB37	220 aa		3.02	□□□□□ -1.93
UBR5-208	ENST00000520898	S100Z	Q8WXG8	99 aa		3.02	□□□□□ -1.93
UBR5-208	ENST00000520898	ISOC2	Q96AB3	205 aa		3.02	□□□□□ -1.93
UBR5-208	ENST00000520898	CNFN	Q9BYD5	112 aa		3.02	□□□□□ -1.93
UBR5-208	ENST00000520898	RPS10P5	Q9NQ39	176 aa		3.02	□□□□□ -1.93
UBR5-208	ENST00000520898	APCS	P02743	223 aa		3.01	□□□□□ -1.93
UBR5-208	ENST00000520898	ESD	P10768	282 aa		3.01	□□□□□ -1.93
UBR5-208	ENST00000520898	CTRL	P40313	264 aa		3.01	□□□□□ -1.93
UBR5-208	ENST00000520898	RPL35	P42766	123 aa	Known RBP	3.01	□□□□□ -1.93
UBR5-208	ENST00000520898	UBE2D1	P51668	147 aa		3.01	□□□□□ -1.93
UBR5-208	ENST00000520898	EIF5A	P63241	154 aa	Known RBP	3.01	□□□□□ -1.93
UBR5-208	ENST00000520898	SS18	Q15532	418 aa		3.01	□□□□□ -1.93
UBR5-208	ENST00000520898	LYZL1	Q6UWQ5	148 aa		3.01	□□□□□ -1.93
UBR5-208	ENST00000520898	C9orf62	Q8N4C0	152 aa		3.01	□□□□□ -1.93
UBR5-208	ENST00000520898	RPL39L	Q96EH5	51 aa	Known RBP	3.01	□□□□□ -1.93
UBR5-208	ENST00000520898	RPP21	Q9H633	154 aa	Known RBP	3.01	□□□□□ -1.93
UBR5-208	ENST00000520898	CDC42SE2	Q9NRR3	84 aa		3.01	□□□□□ -1.93
UBR5-208	ENST00000520898	SDHAF1	A6NFY7	115 aa		3	□□□□□ -1.93
UBR5-208	ENST00000520898		G3V3Q6	166 aa		3	□□□□□ -1.93
UBR5-208	ENST00000520898	COX7A2L	O14548	114 aa		3	□□□□□ -1.93
UBR5-208	ENST00000520898	TSPAN13	O95857	204 aa		3	□□□□□ -1.93
UBR5-208	ENST00000520898	RPL18A	Q02543	176 aa	Known RBP	3	□□□□□ -1.93
UBR5-208	ENST00000520898	EIF5AL1	Q6IS14	154 aa	Known RBP	3	□□□□□ -1.93
UBR5-208	ENST00000520898	MRPL52	Q86TS9	123 aa	Known RBP	3	□□□□□ -1.93
UBR5-208	ENST00000520898	OR2D3	Q8NGH3	330 aa		3	□□□□□ -1.93
UBR5-208	ENST00000520898	TSKU	Q8WUA8	353 aa		3	□□□□□ -1.93
UBR5-208	ENST00000520898	MBD3L1	Q8WWY6	194 aa		3	□□□□□ -1.93
UBR5-208	ENST00000520898	TMEM101	Q96IK0	257 aa		3	□□□□□ -1.93
UBR5-208	ENST00000520898	BTF3L4	Q96K17	158 aa		3	□□□□□ -1.93
UBR5-208	ENST00000520898	CAMK2N2	Q96S95	79 aa		3	□□□□□ -1.93
UBR5-208	ENST00000520898	CYTL1	Q9NRR1	136 aa		3	□□□□□ -1.93
UBR5-208	ENST00000520898	ALG5	Q9Y673	324 aa		3	□□□□□ -1.93
UBR5-208	ENST00000520898	TRBV6-5	A0A0K0K1A5	114 aa		2.99	□□□□□ -1.93
UBR5-208	ENST00000520898	C1orf196	B1AJZ1	125 aa		2.99	□□□□□ -1.93
UBR5-208	ENST00000520898		I3L3M4	83 aa		2.99	□□□□□ -1.93
UBR5-208	ENST00000520898	PFDN1	O60925	122 aa		2.99	□□□□□ -1.93
UBR5-208	ENST00000520898	IFNA1	P01562	189 aa		2.99	□□□□□ -1.93
UBR5-208	ENST00000520898	TLX1NB	P0CAT3	122 aa		2.99	□□□□□ -1.93
UBR5-208	ENST00000520898	TPRXL	Q17RH7	258 aa		2.99	□□□□□ -1.93
UBR5-208	ENST00000520898	CENPW	Q5EE01	88 aa		2.99	□□□□□ -1.93
UBR5-208	ENST00000520898	C9orf129	Q5T035	196 aa	Known RBP	2.99	□□□□□ -1.93
UBR5-208	ENST00000520898	TEX261	Q6UWH6	196 aa		2.99	□□□□□ -1.93
UBR5-208	ENST00000520898	CEND1	Q8N111	149 aa		2.99	□□□□□ -1.93
UBR5-208	ENST00000520898	NKAPP1	Q8N9T2	125 aa		2.99	□□□□□ -1.93
UBR5-208	ENST00000520898	SFT2D1	Q8WV19	159 aa		2.99	□□□□□ -1.93
UBR5-208	ENST00000520898	SMIM12	Q96EX1	92 aa		2.99	□□□□□ -1.93
UBR5-208	ENST00000520898	FAM210A	Q96ND0	272 aa		2.99	□□□□□ -1.93
UBR5-208	ENST00000520898	MRPL35	Q9NZE8	188 aa	Known RBP	2.99	□□□□□ -1.93
UBR5-208	ENST00000520898	RAB19	A4D1S5	217 aa		2.98	□□□□□ -1.93
UBR5-208	ENST00000520898	ZNF861P	O60384	105 aa		2.98	□□□□□ -1.93
UBR5-208	ENST00000520898	GIP	P09681	153 aa	Predicted RBP	2.98	□□□□□ -1.93
UBR5-208	ENST00000520898	FOXA3	P55318	350 aa	Predicted RBP	2.98	□□□□□ -1.93
UBR5-208	ENST00000520898	LCE1F	Q5T754	118 aa		2.98	□□□□□ -1.93
UBR5-208	ENST00000520898	MRAP2	Q96G30	205 aa		2.98	□□□□□ -1.93
UBR5-208	ENST00000520898	IMMP2L	Q96T52	175 aa		2.98	□□□□□ -1.93

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