RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 LAMA1P25391 3075 aa1.56□□□□□ -2.16
SREK1-208ENST00000520580 SNRNP200O75643 2136 aaKnown RBP1.56□□□□□ -2.16
SREK1-208ENST00000520580 DEFB124Q8NES8 71 aa1.56□□□□□ -2.16
SREK1-208ENST00000520580 TET1Q8NFU7 2136 aa1.56□□□□□ -2.16
SREK1-208ENST00000520580 MRPL36Q9P0J6 103 aaKnown RBP1.56□□□□□ -2.16
SREK1-208ENST00000520580 CACNA1EQ15878 2313 aa1.56□□□□□ -2.16
SREK1-208ENST00000520580 KRTAP5-5Q701N2 237 aaPredicted RBP1.56□□□□□ -2.16
SREK1-208ENST00000520580 RERGLQ9H628 205 aa1.56□□□□□ -2.16
SREK1-208ENST00000520580 NAA60Q9H7X0 242 aa1.56□□□□□ -2.16
SREK1-208ENST00000520580 ZGRF1Q86YA3 2104 aa1.56□□□□□ -2.16
SREK1-208ENST00000520580 COL6A6A6NMZ7 2263 aa1.55□□□□□ -2.16
SREK1-208ENST00000520580 IGKV3D-7A0A0C4DH55 119 aa1.55□□□□□ -2.16
SREK1-208ENST00000520580 IGKV3OR2-268A0A0C4DH90 116 aa1.55□□□□□ -2.16
SREK1-208ENST00000520580 A0A0J9YY99 117 aa1.55□□□□□ -2.16
SREK1-208ENST00000520580 UBE2G1P62253 170 aa1.55□□□□□ -2.16
SREK1-208ENST00000520580 PPP3R1P63098 170 aa1.55□□□□□ -2.16
SREK1-208ENST00000520580 CATR1Q13166 79 aa1.55□□□□□ -2.16
SREK1-208ENST00000520580 LINC00322Q6ZN03 302 aaPredicted RBP1.55□□□□□ -2.16
SREK1-208ENST00000520580 CELSR2Q9HCU4 2923 aa1.55□□□□□ -2.16
SREK1-208ENST00000520580 SPTBN1Q01082 2364 aaKnown RBP1.55□□□□□ -2.16
SREK1-208ENST00000520580 TNRC6BQ9UPQ9 1833 aaKnown RBP1.55□□□□□ -2.16
SREK1-208ENST00000520580 TLN2Q9Y4G6 2542 aa1.55□□□□□ -2.16
SREK1-208ENST00000520580 MED13LQ71F56 2210 aa1.55□□□□□ -2.16
SREK1-208ENST00000520580 NDUFB6O95139 128 aa1.55□□□□□ -2.16
SREK1-208ENST00000520580 GNG4P50150 75 aa1.55□□□□□ -2.16
SREK1-208ENST00000520580 BTG2P78543 158 aa1.55□□□□□ -2.16
SREK1-208ENST00000520580 MRPL54Q6P161 138 aaKnown RBP1.55□□□□□ -2.16
SREK1-208ENST00000520580 LINC00299Q6ZSB3 139 aa1.55□□□□□ -2.16
SREK1-208ENST00000520580 C10orf105Q8TEF2 133 aa1.55□□□□□ -2.16
SREK1-208ENST00000520580 COPS9Q8WXC6 57 aa1.55□□□□□ -2.16
SREK1-208ENST00000520580 PLXNB2O15031 1838 aa1.55□□□□□ -2.16
SREK1-208ENST00000520580 MCRIP1C9JLW8 97 aa1.54□□□□□ -2.16
SREK1-208ENST00000520580 TPPP2P59282 170 aa1.54□□□□□ -2.16
SREK1-208ENST00000520580 Q56UQ5 140 aa1.54□□□□□ -2.16
SREK1-208ENST00000520580 SPTSSBQ8NFR3 76 aa1.54□□□□□ -2.16
SREK1-208ENST00000520580 MCM3APO60318 1980 aa1.54□□□□□ -2.16
SREK1-208ENST00000520580 LOC285556D6RIA3 1793 aa1.54□□□□□ -2.16
SREK1-208ENST00000520580 HIVEP2P31629 2446 aa1.54□□□□□ -2.16
SREK1-208ENST00000520580 APOC4-APOC2K7ER74 178 aa1.54□□□□□ -2.16
SREK1-208ENST00000520580 INE1O15225 51 aa1.54□□□□□ -2.16
SREK1-208ENST00000520580 APOC2P02655 101 aa1.54□□□□□ -2.16
SREK1-208ENST00000520580 PIPP12273 146 aaPredicted RBP1.54□□□□□ -2.16
SREK1-208ENST00000520580 PDE6GP18545 87 aa1.54□□□□□ -2.16
SREK1-208ENST00000520580 RBM3P98179 157 aaKnown RBP1.54□□□□□ -2.16
SREK1-208ENST00000520580 PPDPFLQ8WWR9 84 aa1.54□□□□□ -2.16
SREK1-208ENST00000520580 SERP1Q9Y6X1 66 aa1.54□□□□□ -2.16
SREK1-208ENST00000520580 CSMD2Q7Z408 3487 aa1.53□□□□□ -2.16
SREK1-208ENST00000520580 TGP01266 2768 aa1.53□□□□□ -2.16
SREK1-208ENST00000520580 COL4A1P02462 1669 aa1.53□□□□□ -2.16
SREK1-208ENST00000520580 IGKV3-7A0A075B6H7 116 aa1.53□□□□□ -2.16
SREK1-208ENST00000520580 LOC110117498A0A087WWA1 95 aa1.53□□□□□ -2.16
SREK1-208ENST00000520580 A6NIN4 97 aa1.53□□□□□ -2.16
SREK1-208ENST00000520580 OOSP1A8MZH6 123 aa1.53□□□□□ -2.16
SREK1-208ENST00000520580 RBP2P50120 134 aa1.53□□□□□ -2.16
SREK1-208ENST00000520580 SPATA45Q537H7 98 aa1.53□□□□□ -2.16
SREK1-208ENST00000520580 SPANXN1Q5VSR9 72 aa1.53□□□□□ -2.16
SREK1-208ENST00000520580 RPL7L1Q6DKI1 246 aaKnown RBP1.53□□□□□ -2.16
SREK1-208ENST00000520580 KRTAP13-1Q8IUC0 172 aa1.53□□□□□ -2.16
SREK1-208ENST00000520580 ATG5Q9H1Y0 275 aa1.53□□□□□ -2.16
SREK1-208ENST00000520580 MED9Q9NWA0 146 aa1.53□□□□□ -2.16
SREK1-208ENST00000520580 ESPL1Q14674 2120 aa1.53□□□□□ -2.17
SREK1-208ENST00000520580 CSPG4Q6UVK1 2322 aa1.52□□□□□ -2.17
SREK1-208ENST00000520580 CXorf51AA0A1B0GTR3 108 aa1.52□□□□□ -2.17
SREK1-208ENST00000520580 NUPR2A6NF83 97 aa1.52□□□□□ -2.17
SREK1-208ENST00000520580 GDF5OSQ5U4N7 250 aa1.52□□□□□ -2.17
SREK1-208ENST00000520580 GTF2H5Q6ZYL4 71 aa1.52□□□□□ -2.17
SREK1-208ENST00000520580 C10orf82Q8WW14 230 aa1.52□□□□□ -2.17
SREK1-208ENST00000520580 IFI27L1Q96BM0 104 aa1.52□□□□□ -2.17
SREK1-208ENST00000520580 MRPL35Q9NZE8 188 aaKnown RBP1.52□□□□□ -2.17
SREK1-208ENST00000520580 NCOA6Q14686 2063 aaPredicted RBP1.52□□□□□ -2.17
SREK1-208ENST00000520580 COL6A5A8TX70 2615 aa1.52□□□□□ -2.17
SREK1-208ENST00000520580 LOC101927531A0A1B0GV80 90 aa1.52□□□□□ -2.17
SREK1-208ENST00000520580 TCRBV3S1A0A5B6 114 aa1.52□□□□□ -2.17
SREK1-208ENST00000520580 M0R2N4 97 aa1.52□□□□□ -2.17
SREK1-208ENST00000520580 GYPBP06028 91 aa1.52□□□□□ -2.17
SREK1-208ENST00000520580 FXYD4P59646 89 aa1.52□□□□□ -2.17
SREK1-208ENST00000520580 C9orf153Q5TBE3 101 aa1.52□□□□□ -2.17
SREK1-208ENST00000520580 UNQ6190/PRO20217Q6UXQ8 127 aa1.52□□□□□ -2.17
SREK1-208ENST00000520580 TMEM141Q96I45 108 aa1.52□□□□□ -2.17
SREK1-208ENST00000520580 ODF3Q96PU9 254 aa1.52□□□□□ -2.17
SREK1-208ENST00000520580 ABCA4P78363 2273 aa1.52□□□□□ -2.17
SREK1-208ENST00000520580 NBASA2RRP1 2371 aa1.52□□□□□ -2.17
SREK1-208ENST00000520580 IGLV3-32A0A0A0MS00 114 aa1.51□□□□□ -2.17
SREK1-208ENST00000520580 CCKP06307 115 aa1.51□□□□□ -2.17
SREK1-208ENST00000520580 SPTBP11277 2137 aa1.51□□□□□ -2.17
SREK1-208ENST00000520580 INSL4Q14641 139 aa1.51□□□□□ -2.17
SREK1-208ENST00000520580 SLC48A1Q6P1K1 146 aa1.51□□□□□ -2.17
SREK1-208ENST00000520580 Q6ZS92 163 aa1.51□□□□□ -2.17
SREK1-208ENST00000520580 DSCR8Q96T75 97 aa1.51□□□□□ -2.17
SREK1-208ENST00000520580 APCP25054 2843 aa1.51□□□□□ -2.17
SREK1-208ENST00000520580 PLXNA2O75051 1894 aa1.51□□□□□ -2.17
SREK1-208ENST00000520580 SPAG17Q6Q759 2223 aa1.51□□□□□ -2.17
SREK1-208ENST00000520580 SORL1Q92673 2214 aa1.51□□□□□ -2.17
SREK1-208ENST00000520580 RPL37AP61513 92 aaKnown RBP1.51□□□□□ -2.17
SREK1-208ENST00000520580 DMAC1Q96GE9 116 aa1.51□□□□□ -2.17
SREK1-208ENST00000520580 PPP3R2Q96LZ3 170 aa1.51□□□□□ -2.17
SREK1-208ENST00000520580 AKAP9Q99996 3911 aa1.5□□□□□ -2.17
SREK1-208ENST00000520580 TRBV10-1A0A0K0K1A3 114 aa1.5□□□□□ -2.17
SREK1-208ENST00000520580 SMIM6P0DI80 62 aa1.5□□□□□ -2.17
SREK1-208ENST00000520580 C9orf116Q5BN46 136 aaPredicted RBP1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 684.9 ms